Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14d14
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074549-1|BAC11053.1|  215|Homo sapiens protein ( Homo sapiens ...    37   0.081
AC006011-1|AAX82032.1|  215|Homo sapiens unknown protein.              37   0.081
BC068098-1|AAH68098.1|  160|Homo sapiens SFT2 domain containing ...    31   5.3  
AY358675-1|AAQ89038.1|   77|Homo sapiens GPVK512 protein.              31   5.3  
AL035297-1|CAA22897.1|  160|Homo sapiens hypothetical protein pr...    31   5.3  
AL009051-5|CAI22642.1|  160|Homo sapiens novel protein protein.        31   5.3  

>AK074549-1|BAC11053.1|  215|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90068 fis, clone HEMBA1003732, weakly similar to
           SFT2 PROTEIN. ).
          Length = 215

 Score = 36.7 bits (81), Expect = 0.081
 Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = -1

Query: 560 YIPVLLLQARKFAXXXXXXXXXXXXXXXXLYGPWAHLKSMFSKER-ALTTSIYSITLIAT 384
           Y PVLLL+ARKFA                L G  A  + +  +E  +    +Y   L AT
Sbjct: 97  YAPVLLLRARKFALLWSLGSALALAGSALLRGGAACGRLLRCEEAPSRPALLYMAALGAT 156

Query: 383 LYCALHLQSTPWTIVCAVLQVMAL 312
           L+ AL L+ST  T++ A  QV AL
Sbjct: 157 LFAALGLRSTLLTVLGAGAQVAAL 180


>AC006011-1|AAX82032.1|  215|Homo sapiens unknown protein.
          Length = 215

 Score = 36.7 bits (81), Expect = 0.081
 Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = -1

Query: 560 YIPVLLLQARKFAXXXXXXXXXXXXXXXXLYGPWAHLKSMFSKER-ALTTSIYSITLIAT 384
           Y PVLLL+ARKFA                L G  A  + +  +E  +    +Y   L AT
Sbjct: 97  YAPVLLLRARKFALLWSLGSALALAGSALLRGGAACGRLLRCEEAPSRPALLYMAALGAT 156

Query: 383 LYCALHLQSTPWTIVCAVLQVMAL 312
           L+ AL L+ST  T++ A  QV AL
Sbjct: 157 LFAALGLRSTLLTVLGAGAQVAAL 180


>BC068098-1|AAH68098.1|  160|Homo sapiens SFT2 domain containing 2
           protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 467 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 306
           GP   LK MF   R + T +  +    TL  A    +    ++  +LQ +AL W
Sbjct: 85  GPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTW 138


>AY358675-1|AAQ89038.1|   77|Homo sapiens GPVK512 protein.
          Length = 77

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 467 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 306
           GP   LK MF   R + T +  +    TL  A    +    ++  +LQ +AL W
Sbjct: 2   GPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTW 55


>AL035297-1|CAA22897.1|  160|Homo sapiens hypothetical protein
           protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 467 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 306
           GP   LK MF   R + T +  +    TL  A    +    ++  +LQ +AL W
Sbjct: 85  GPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTW 138


>AL009051-5|CAI22642.1|  160|Homo sapiens novel protein protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -1

Query: 467 GPWAHLKSMFSKERALTTSIYSITLIATLYCALHLQSTPWTIVCAVLQVMALFW 306
           GP   LK MF   R + T +  +    TL  A    +    ++  +LQ +AL W
Sbjct: 85  GPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTW 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,201,676
Number of Sequences: 237096
Number of extensions: 1621947
Number of successful extensions: 2336
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2336
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)