Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14d13
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.5  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   4.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   4.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.9  
Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precurso...    23   7.7  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   7.7  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      23   7.7  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    23   7.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 281 RVLK*RKQAELSCLRALSAMWLRLVRRYQQNLELSILL 394
           RV   +KQ +L       +  + LV RY  N +LSI L
Sbjct: 160 RVRPLKKQLDLEAAWMQPSSTISLVERYDNNAQLSIAL 197


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 325 SALCNVAPTSPSVSAEPRTVHSSA 396
           SA  +  PT P+ S EPR   SS+
Sbjct: 53  SASSSSVPTLPTTSGEPRAAGSSS 76


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 325 SALCNVAPTSPSVSAEPRTVHSSA 396
           SA  +  PT P+ S EPR   SS+
Sbjct: 53  SASSSSVPTLPTTSGEPRAAGSSS 76


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 437 AIRRAVATLAYEWRAEEWTVRGSADTDGLVGATLQRALGGKKAQL 303
           A+ +  +  A E RAE+   + + DT  ++      ALGG++A L
Sbjct: 655 ALPKGESEKADEKRAEQKDEQRATDTTAVMLVDSDEALGGEEAPL 699


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 342 HIAESARRQESSACLRY 292
           H+AES RR + +A LR+
Sbjct: 251 HVAESPRRVDKTAVLRF 267


>Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precursor
           of ANTRYP7 protein.
          Length = 267

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 389 EWTVRGSADTDGLVGATLQRALGGKK---AQLACAISALLNHPN 267
           +W +  +  TDGL   TL   LG  +   +     ++ ++ HPN
Sbjct: 75  KWVLTAAHCTDGLQAFTLTVRLGSSRHASSGTVVNVARIVEHPN 118


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 344 LRLVRRYQQNLELSILLLAIRR 409
           LR +RRYQ++ EL I  L  +R
Sbjct: 47  LREIRRYQKSTELLIRKLPFQR 68


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 344 LRLVRRYQQNLELSILLLAIRR 409
           LR +RRYQ++ EL I  L  +R
Sbjct: 49  LREIRRYQKSTELLIRKLPFQR 70


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 375 SNCPFFCSPFVGQSSYCTSNCKS 443
           + C  FC PF GQ++  T   +S
Sbjct: 157 TKCVPFCRPFSGQTALLTPESQS 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,923
Number of Sequences: 2352
Number of extensions: 13452
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)