Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14d13
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118926-1|AAM50786.1| 344|Drosophila melanogaster LD23842p pro... 69 7e-12
AF165113-1|AAF20172.1| 344|Drosophila melanogaster membrane imp... 69 7e-12
AE014298-1058|AAS65272.1| 344|Drosophila melanogaster CG12157-P... 69 7e-12
AE014298-1057|AAF46272.1| 344|Drosophila melanogaster CG12157-P... 69 7e-12
BT011425-1|AAR96217.1| 340|Drosophila melanogaster AT01036p pro... 63 5e-10
AE013599-164|AAF57268.1| 340|Drosophila melanogaster CG8330-PA ... 63 5e-10
BT024318-1|ABC86380.1| 320|Drosophila melanogaster IP11229p pro... 62 6e-10
AE014297-2071|AAF55216.1| 320|Drosophila melanogaster CG4520-PA... 62 6e-10
AY094800-1|AAM11153.1| 421|Drosophila melanogaster LD24646p pro... 29 9.1
AE014297-764|AAN13388.1| 421|Drosophila melanogaster CG31453-PA... 29 9.1
>AY118926-1|AAM50786.1| 344|Drosophila melanogaster LD23842p
protein.
Length = 344
Score = 68.9 bits (161), Expect = 7e-12
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = -1
Query: 674 NRDFIALHYLQAVTEQISLGAEVVAR-GHSA---ELSSVSAAGRWFSESHSVSATLGNRG 507
N + YLQ+VT ++LG+E+ + G + +++ +S GR+ + S S TLG G
Sbjct: 193 NSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSG 252
Query: 506 LDLCYARAIKPYLTVAAMLEVGFAIRRAVATLAYEWRAEEWTV--RGSADTDGLVGATLQ 333
L +CY + L + A +E ++ +VATLAY+ + + RG D++ + L+
Sbjct: 253 LHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLE 312
Query: 332 RALGGKKAQLACAISALLNHPNDKFRLGFGV 240
+ L A+S +NH + FRLG G+
Sbjct: 313 KRLA--PLPFTLALSGRMNHVKNNFRLGCGL 341
>AF165113-1|AAF20172.1| 344|Drosophila melanogaster membrane import
protein protein.
Length = 344
Score = 68.9 bits (161), Expect = 7e-12
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = -1
Query: 674 NRDFIALHYLQAVTEQISLGAEVVAR-GHSA---ELSSVSAAGRWFSESHSVSATLGNRG 507
N + YLQ+VT ++LG+E+ + G + +++ +S GR+ + S S TLG G
Sbjct: 193 NSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSG 252
Query: 506 LDLCYARAIKPYLTVAAMLEVGFAIRRAVATLAYEWRAEEWTV--RGSADTDGLVGATLQ 333
L +CY + L + A +E ++ +VATLAY+ + + RG D++ + L+
Sbjct: 253 LHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLE 312
Query: 332 RALGGKKAQLACAISALLNHPNDKFRLGFGV 240
+ L A+S +NH + FRLG G+
Sbjct: 313 KRLA--PLPFTLALSGRMNHVKNNFRLGCGL 341
>AE014298-1058|AAS65272.1| 344|Drosophila melanogaster CG12157-PB,
isoform B protein.
Length = 344
Score = 68.9 bits (161), Expect = 7e-12
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = -1
Query: 674 NRDFIALHYLQAVTEQISLGAEVVAR-GHSA---ELSSVSAAGRWFSESHSVSATLGNRG 507
N + YLQ+VT ++LG+E+ + G + +++ +S GR+ + S S TLG G
Sbjct: 193 NSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSG 252
Query: 506 LDLCYARAIKPYLTVAAMLEVGFAIRRAVATLAYEWRAEEWTV--RGSADTDGLVGATLQ 333
L +CY + L + A +E ++ +VATLAY+ + + RG D++ + L+
Sbjct: 253 LHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLE 312
Query: 332 RALGGKKAQLACAISALLNHPNDKFRLGFGV 240
+ L A+S +NH + FRLG G+
Sbjct: 313 KRLA--PLPFTLALSGRMNHVKNNFRLGCGL 341
>AE014298-1057|AAF46272.1| 344|Drosophila melanogaster CG12157-PA,
isoform A protein.
Length = 344
Score = 68.9 bits (161), Expect = 7e-12
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Frame = -1
Query: 674 NRDFIALHYLQAVTEQISLGAEVVAR-GHSA---ELSSVSAAGRWFSESHSVSATLGNRG 507
N + YLQ+VT ++LG+E+ + G + +++ +S GR+ + S S TLG G
Sbjct: 193 NSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAGSSVWSGTLGQSG 252
Query: 506 LDLCYARAIKPYLTVAAMLEVGFAIRRAVATLAYEWRAEEWTV--RGSADTDGLVGATLQ 333
L +CY + L + A +E ++ +VATLAY+ + + RG D++ + L+
Sbjct: 253 LHVCYYQKASDQLQIGAEVETSLRMQESVATLAYQIDLPKANLVFRGGIDSNWQIFGVLE 312
Query: 332 RALGGKKAQLACAISALLNHPNDKFRLGFGV 240
+ L A+S +NH + FRLG G+
Sbjct: 313 KRLA--PLPFTLALSGRMNHVKNNFRLGCGL 341
>BT011425-1|AAR96217.1| 340|Drosophila melanogaster AT01036p
protein.
Length = 340
Score = 62.9 bits (146), Expect = 5e-10
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = -1
Query: 650 YLQAVTEQISLGAEVVAR-GHSA---ELSSVSAAGRWFSESHSVSATLGNRGLDLCYARA 483
YLQ+VT++++LG+E G + +++ +SA GR+ S TLG G L Y +
Sbjct: 197 YLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLSYYQK 256
Query: 482 IKPYLTVAAMLEVGFAIRRAVATLAY--EWRAEEWTVRGSADTDGLVGATLQRALGGKKA 309
L + +E + + AT+AY + + RGS D++ L+ L++ L +
Sbjct: 257 ASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRL--QPL 314
Query: 308 QLACAISALLNHPNDKFRLGFGV 240
+ AIS +NH + FRLG G+
Sbjct: 315 PFSLAISGRMNHQKNSFRLGCGL 337
>AE013599-164|AAF57268.1| 340|Drosophila melanogaster CG8330-PA
protein.
Length = 340
Score = 62.9 bits (146), Expect = 5e-10
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = -1
Query: 650 YLQAVTEQISLGAEVVAR-GHSA---ELSSVSAAGRWFSESHSVSATLGNRGLDLCYARA 483
YLQ+VT++++LG+E G + +++ +SA GR+ S TLG G L Y +
Sbjct: 197 YLQSVTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFHLSYYQK 256
Query: 482 IKPYLTVAAMLEVGFAIRRAVATLAY--EWRAEEWTVRGSADTDGLVGATLQRALGGKKA 309
L + +E + + AT+AY + + RGS D++ L+ L++ L +
Sbjct: 257 ASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSNWLISGVLEKRL--QPL 314
Query: 308 QLACAISALLNHPNDKFRLGFGV 240
+ AIS +NH + FRLG G+
Sbjct: 315 PFSLAISGRMNHQKNSFRLGCGL 337
>BT024318-1|ABC86380.1| 320|Drosophila melanogaster IP11229p
protein.
Length = 320
Score = 62.5 bits (145), Expect = 6e-10
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = -1
Query: 647 LQAVTEQISLGAEVVARGHSAE--LSSVSAAGRWFSESHSVSATLGNRGLDLCYARAIKP 474
+++V+ +LG E++ + + ++ A R+ ++S++AT +GLD+ Y + I P
Sbjct: 174 MRSVSAHWALGGELLLEWNDPQKLTPDLALAARYSHYNYSLAATASRQGLDVTYWQRIHP 233
Query: 473 YLTVAAMLEVGFAIRRAVATLAYEWRAEEWTVRGSADTDGLVGATLQRALGGKKAQLACA 294
++ +A +L R+ +AT+ Y+W V G D+D VG + L Q+
Sbjct: 234 HIQMANLLAWNRNTRKTIATICYQWNFWNSAVHGMFDSDASVGFMWTKYLTHLPLQM--G 291
Query: 293 ISALLNHPNDKFRLG 249
S ++N P D+F G
Sbjct: 292 FSVVMNLPTDRFAFG 306
>AE014297-2071|AAF55216.1| 320|Drosophila melanogaster CG4520-PA
protein.
Length = 320
Score = 62.5 bits (145), Expect = 6e-10
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = -1
Query: 647 LQAVTEQISLGAEVVARGHSAE--LSSVSAAGRWFSESHSVSATLGNRGLDLCYARAIKP 474
+++V+ +LG E++ + + ++ A R+ ++S++AT +GLD+ Y + I P
Sbjct: 174 MRSVSAHWALGGELLLEWNDPQKLTPDLALAARYSHYNYSLAATASRQGLDVTYWQRIHP 233
Query: 473 YLTVAAMLEVGFAIRRAVATLAYEWRAEEWTVRGSADTDGLVGATLQRALGGKKAQLACA 294
++ +A +L R+ +AT+ Y+W V G D+D VG + L Q+
Sbjct: 234 HIQMANLLAWNRNTRKTIATICYQWNFWNSAVHGMFDSDASVGFMWTKYLTHLPLQM--G 291
Query: 293 ISALLNHPNDKFRLG 249
S ++N P D+F G
Sbjct: 292 FSVVMNLPTDRFAFG 306
>AY094800-1|AAM11153.1| 421|Drosophila melanogaster LD24646p
protein.
Length = 421
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 644 QAVTEQISLGAE-VVARGHSAELSSVSAAGRWFSESHSVSATLGNRGLDL 498
+A+ +++S+ + A H E++S S +WFSES + A L N+ +L
Sbjct: 184 KALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
>AE014297-764|AAN13388.1| 421|Drosophila melanogaster CG31453-PA
protein.
Length = 421
Score = 28.7 bits (61), Expect = 9.1
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 644 QAVTEQISLGAE-VVARGHSAELSSVSAAGRWFSESHSVSATLGNRGLDL 498
+A+ +++S+ + A H E++S S +WFSES + A L N+ +L
Sbjct: 184 KALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,090,964
Number of Sequences: 53049
Number of extensions: 577745
Number of successful extensions: 1627
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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