Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14d11
         (375 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    27   0.23 
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    25   0.93 

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +1

Query: 67  NRPNIILIVFLFLDT--NYLSIVVHYYSFILY 156
           N P+ ++ V  F++T  +YL+I+V YY ++ +
Sbjct: 335 NLPSYVMRVRAFVETGHSYLTILVQYYCYLFF 366


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
 Frame = +1

Query: 67  NRPNIILIVFLFLDTNYLSIVVHYYSF----ILYNLI 165
           ++P+  LI+ LF+ T Y+S +++Y S     +LYN++
Sbjct: 299 HQPSDPLILKLFIITTYISGILYYLSTCINPLLYNIM 335


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,826
Number of Sequences: 2352
Number of extensions: 3915
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)