Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14d10
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118414-1|AAM48443.1| 364|Drosophila melanogaster RE67917p pro... 77 3e-14
AE014296-1064|AAF50699.1| 364|Drosophila melanogaster CG10467-P... 77 3e-14
AY122103-1|AAM52615.1| 367|Drosophila melanogaster GH10091p pro... 70 2e-12
AE014296-3594|AAN12184.1| 367|Drosophila melanogaster CG32445-P... 70 2e-12
BT022324-1|AAY54740.1| 334|Drosophila melanogaster IP11335p pro... 69 4e-12
AE014134-2089|AAF53115.1| 368|Drosophila melanogaster CG4988-PA... 69 4e-12
AY094690-1|AAM11043.1| 370|Drosophila melanogaster GH08902p pro... 62 8e-10
AE014296-3593|AAF51760.3| 370|Drosophila melanogaster CG32444-P... 62 8e-10
BT024330-1|ABC86392.1| 398|Drosophila melanogaster IP10617p pro... 60 2e-09
AE014298-1965|AAF48321.1| 392|Drosophila melanogaster CG10996-P... 60 2e-09
>AY118414-1|AAM48443.1| 364|Drosophila melanogaster RE67917p
protein.
Length = 364
Score = 76.6 bits (180), Expect = 3e-14
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -3
Query: 330 GYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 163
G P+ GK G Y KH FCL Q +PD+VNH+NFP+++L PGE Y H + YKFG+
Sbjct: 307 GESPIPGKDGAAYAKHCAFCLETQKFPDSVNHSNFPSTILRPGESYQHEVIYKFGV 362
Score = 58.8 bits (136), Expect = 6e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = -3
Query: 624 NXCVTQGTAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLPDPDK 478
N CVT Q L ARA HP +GR +E+ SNQPG+QFYT N +PD ++
Sbjct: 258 NFCVTFSPPQPLAKVARATHPPSGRWLEVVSNQPGVQFYTSNFMPDVER 306
>AE014296-1064|AAF50699.1| 364|Drosophila melanogaster CG10467-PA
protein.
Length = 364
Score = 76.6 bits (180), Expect = 3e-14
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -3
Query: 330 GYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 163
G P+ GK G Y KH FCL Q +PD+VNH+NFP+++L PGE Y H + YKFG+
Sbjct: 307 GESPIPGKDGAAYAKHCAFCLETQKFPDSVNHSNFPSTILRPGESYQHEVIYKFGV 362
Score = 58.8 bits (136), Expect = 6e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = -3
Query: 624 NXCVTQGTAQDLTFHARALHPVTGRVMELYSNQPGLQFYTGNLLPDPDK 478
N CVT Q L ARA HP +GR +E+ SNQPG+QFYT N +PD ++
Sbjct: 258 NFCVTFSPPQPLAKVARATHPPSGRWLEVVSNQPGVQFYTSNFMPDVER 306
>AY122103-1|AAM52615.1| 367|Drosophila melanogaster GH10091p
protein.
Length = 367
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = -3
Query: 324 VPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFG 166
+P+ GK G Y + G F L Q YPDA+NH +FP+ VLNPG++Y H++ Y+FG
Sbjct: 309 IPIAGKDGVNYVRQGAFTLETQKYPDAMNHCDFPSVVLNPGQLYDHQVVYRFG 361
Score = 48.4 bits (110), Expect = 8e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3
Query: 579 ARALHPVTGRVMELYSNQPGLQFYTGNLLPDPD 481
AR +HP +GR ME+++NQPGLQF T N LP D
Sbjct: 273 ARVVHPCSGRFMEVHTNQPGLQFSTANHLPSED 305
>AE014296-3594|AAN12184.1| 367|Drosophila melanogaster CG32445-PA
protein.
Length = 367
Score = 70.1 bits (164), Expect = 2e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = -3
Query: 324 VPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFG 166
+P+ GK G Y + G F L Q YPDA+NH +FP+ VLNPG++Y H++ Y+FG
Sbjct: 309 IPIAGKDGVNYVRQGAFTLETQKYPDAMNHCDFPSVVLNPGQLYDHQVVYRFG 361
Score = 48.4 bits (110), Expect = 8e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3
Query: 579 ARALHPVTGRVMELYSNQPGLQFYTGNLLPDPD 481
AR +HP +GR ME+++NQPGLQF T N LP D
Sbjct: 273 ARVVHPCSGRFMEVHTNQPGLQFSTANHLPSED 305
>BT022324-1|AAY54740.1| 334|Drosophila melanogaster IP11335p
protein.
Length = 334
Score = 69.3 bits (162), Expect = 4e-12
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = -3
Query: 390 SSVAGEVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVL 211
S A EV + ++ T+ + GK+G FY KHG C+ +PDA+NH NFP+ L
Sbjct: 249 SGRALEVWTNQPGIQFYTANNITKITGKKGLFYVKHGALCVQTVKFPDAINHQNFPSINL 308
Query: 210 NPGEVYVHRIQYKFGI 163
NP E Y H + Y F +
Sbjct: 309 NPNETYRHEVVYWFKV 324
Score = 43.2 bits (97), Expect = 3e-04
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -3
Query: 579 ARALHPVTGRVMELYSNQPGLQFYTGN 499
A+ +HP +GR +E+++NQPG+QFYT N
Sbjct: 242 AKIVHPPSGRALEVWTNQPGIQFYTAN 268
>AE014134-2089|AAF53115.1| 368|Drosophila melanogaster CG4988-PA
protein.
Length = 368
Score = 69.3 bits (162), Expect = 4e-12
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = -3
Query: 390 SSVAGEVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVL 211
S A EV + ++ T+ + GK+G FY KHG C+ +PDA+NH NFP+ L
Sbjct: 283 SGRALEVWTNQPGIQFYTANNITKITGKKGLFYVKHGALCVQTVKFPDAINHQNFPSINL 342
Query: 210 NPGEVYVHRIQYKFGI 163
NP E Y H + Y F +
Sbjct: 343 NPNETYRHEVVYWFKV 358
Score = 43.2 bits (97), Expect = 3e-04
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -3
Query: 579 ARALHPVTGRVMELYSNQPGLQFYTGN 499
A+ +HP +GR +E+++NQPG+QFYT N
Sbjct: 276 AKIVHPPSGRALEVWTNQPGIQFYTAN 302
>AY094690-1|AAM11043.1| 370|Drosophila melanogaster GH08902p
protein.
Length = 370
Score = 61.7 bits (143), Expect = 8e-10
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = -3
Query: 375 EVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEV 196
EV ++ ++ T+ ++GK T Y+KHG FC+ + +PDA+NH FP+ L P E
Sbjct: 288 EVWTDQPGMQFYTANNLTSIVGKNCTKYEKHGSFCVETEKFPDAMNHPEFPSISLEPNEK 347
Query: 195 YVHRIQYKFGI 163
Y H + Y F +
Sbjct: 348 YRHDVLYWFKV 358
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = -3
Query: 579 ARALHPVTGRVMELYSNQPGLQFYTGNLL 493
A+ +HP + RV+E++++QPG+QFYT N L
Sbjct: 276 AKIVHPPSCRVLEVWTDQPGMQFYTANNL 304
>AE014296-3593|AAF51760.3| 370|Drosophila melanogaster CG32444-PA
protein.
Length = 370
Score = 61.7 bits (143), Expect = 8e-10
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = -3
Query: 375 EVMNEEESVEGKTSVGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEV 196
EV ++ ++ T+ ++GK T Y+KHG FC+ + +PDA+NH FP+ L P E
Sbjct: 288 EVWTDQPGMQFYTANNLTSIVGKNCTKYEKHGSFCVETEKFPDAMNHPEFPSISLEPNEK 347
Query: 195 YVHRIQYKFGI 163
Y H + Y F +
Sbjct: 348 YRHDVLYWFKV 358
Score = 39.5 bits (88), Expect = 0.004
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = -3
Query: 579 ARALHPVTGRVMELYSNQPGLQFYTGNLL 493
A+ +HP + RV+E++++QPG+QFYT N L
Sbjct: 276 AKIVHPPSCRVLEVWTDQPGMQFYTANNL 304
>BT024330-1|ABC86392.1| 398|Drosophila melanogaster IP10617p
protein.
Length = 398
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = -3
Query: 333 VGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 163
+G P++GK+ T Y +H F L NYPDAVN +FP +NPGE Y H Y FG+
Sbjct: 315 LGEPPILGKKCTRYWQHCGFSLQLLNYPDAVNQPDFPRIFINPGEHYFHETIYHFGV 371
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3
Query: 576 RALHPVTGRVMELYSNQPGLQFYTGNLLP 490
R LHP +GR ME++SNQP ++F TGN P
Sbjct: 283 RFLHPDSGRFMEIFSNQPCVKFTTGNCFP 311
>AE014298-1965|AAF48321.1| 392|Drosophila melanogaster CG10996-PA
protein.
Length = 392
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = -3
Query: 333 VGYVPLMGKQGTFYKKHGLFCLMPQNYPDAVNHTNFPNSVLNPGEVYVHRIQYKFGI 163
+G P++GK+ T Y +H F L NYPDAVN +FP +NPGE Y H Y FG+
Sbjct: 309 LGEPPILGKKCTRYWQHCGFSLQLLNYPDAVNQPDFPRIFINPGEHYFHETIYHFGV 365
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3
Query: 576 RALHPVTGRVMELYSNQPGLQFYTGNLLP 490
R LHP +GR ME++SNQP ++F TGN P
Sbjct: 277 RFLHPDSGRFMEIFSNQPCVKFTTGNCFP 305
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,931,434
Number of Sequences: 53049
Number of extensions: 492590
Number of successful extensions: 1149
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -