Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14d07
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 31 1.1
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 31 1.1
L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical pr... 31 1.1
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 30 1.5
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 30 1.5
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 30 1.5
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 30 1.9
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 30 1.9
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 30 1.9
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 30 1.9
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 30 1.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 30 1.9
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 30 1.9
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 30 1.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 1.9
Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -1
Query: 584 PARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMA---NFLHPIPETKSGAEDVPAG 414
P RS + ++ + P +S + ++ +H + N + P TK D G
Sbjct: 790 PERSRKRKMVNATVWMPPMESTNEKGRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTG 849
Query: 413 MRLHGTR-ARLYTSVLAGASTEQTEEIAVNDYDAT-VPEDLPDDEVPLN 273
+G + +++Y LA E+ + T P DLP DE+PL+
Sbjct: 850 Y--NGEQYSQIYPQTLANGYPGDYNELNFDFQSETFAPADLPADEIPLH 896
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical protein
F02A9.6 protein.
Length = 1295
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -1
Query: 584 PARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMA---NFLHPIPETKSGAEDVPAG 414
P RS + ++ + P +S + ++ +H + N + P TK D G
Sbjct: 790 PERSRKRKMVNATVWMPPMESTNEKGRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTG 849
Query: 413 MRLHGTR-ARLYTSVLAGASTEQTEEIAVNDYDAT-VPEDLPDDEVPLN 273
+G + +++Y LA E+ + T P DLP DE+PL+
Sbjct: 850 Y--NGEQYSQIYPQTLANGYPGDYNELNFDFQSETFAPADLPADEIPLH 896
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.elegans
glp-1 gene,complete cds. ).
Length = 1295
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -1
Query: 584 PARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGMA---NFLHPIPETKSGAEDVPAG 414
P RS + ++ + P +S + ++ +H + N + P TK D G
Sbjct: 790 PERSRKRKMVNATVWMPPMESTNEKGRRNQSNHSSQCSLLDNSAYYHPNTKRHCSDYSTG 849
Query: 413 MRLHGTR-ARLYTSVLAGASTEQTEEIAVNDYDAT-VPEDLPDDEVPLN 273
+G + +++Y LA E+ + T P DLP DE+PL+
Sbjct: 850 Y--NGEQYSQIYPQTLANGYPGDYNELNFDFQSETFAPADLPADEIPLH 896
>L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical
protein K06H7.7 protein.
Length = 322
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 314 TVPEDLPDDEVPLNEELQIILPPRCDDVTAESSVTKTG*RKMNSKSIAIQHKLIDEVYT* 135
TVP DL D +P +E++QI + DD+ E ++ R N + + +++Y
Sbjct: 198 TVPLDLSDIPIPCSEDIQIHVSFLADDL-LERHISSNVNRSSNRDDLDFSRRTCEKMYDL 256
Query: 134 HVEVKGAQES 105
+ ++ Q S
Sbjct: 257 YQKMMRGQSS 266
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 30.3 bits (65), Expect = 1.5
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1589 INYSQADSPSQKRDAIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 30.3 bits (65), Expect = 1.5
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 686 INYSQADSPSQKRDAIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 745
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 746 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 804
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 805 NENIVDRTVPLNEDEQ 820
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 30.3 bits (65), Expect = 1.5
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 759 INYSQADSPSQKRDAIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 818
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 819 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 877
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 878 NENIVDRTVPLNEDEQ 893
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 569 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 628
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 629 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 687
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 688 NENIVDRTVPLNEDEQ 703
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 679 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 738
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 739 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 797
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 798 NENIVDRTVPLNEDEQ 813
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1589 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1589 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1583 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1642
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1643 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1701
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1702 NENIVDRTVPLNEDEQ 1717
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.9 bits (64), Expect = 1.9
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = -1
Query: 650 VPYXRRMKPDELELLFRGYADLPARSLQENK-ESSQIIFPFAQSVTKAIKQEN--VDHDK 480
+ Y + P + R + ++PA +L + + + ++ T ++Q V
Sbjct: 1589 INYSQADSPSQKREPIRHFEEVPAATLVKREVRTEDLVTREPVQPTHHVEQATTVVQEPS 1648
Query: 479 GMANFLH-PIPETKSGAEDVP-AGMR-LHGTRARLYTSVLAGASTEQTEEIAVNDYDATV 309
A H P+PE E+ P A MR + T ++ S E+T D D V
Sbjct: 1649 YSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPVVEERTITTTYED-DVAV 1707
Query: 308 PEDLPDDEVPLNEELQ 261
E++ D VPLNE+ Q
Sbjct: 1708 NENIVDRTVPLNEDEQ 1723
>Z81521-1|CAB04226.1| 319|Caenorhabditis elegans Hypothetical
protein F32A11.1 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = -1
Query: 617 LELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQENVDHDKGM 474
LE++ RGYA +PA ++ +S Q I +++ +++ + E V +G+
Sbjct: 181 LEVVRRGYARVPAPDQVKHLKSLQTIPAYSRLISRLLMSEKVADRRGV 228
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 566 ENKESSQIIFPFAQSVTKAIKQENVDHDKGMANFLHPIPETK 441
+NK+ QI+ Q+ +K + +ENV KGMA + I E K
Sbjct: 550 DNKKLQQILEEVRQNQSKVL-EENVKLRKGMAEAIEKIEEFK 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,698,088
Number of Sequences: 27780
Number of extensions: 355055
Number of successful extensions: 908
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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