Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14c24
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 345 3e-95
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 345 3e-95
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 345 3e-95
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 345 3e-95
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 345 3e-95
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 345 3e-95
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 344 5e-95
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 344 5e-95
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 344 5e-95
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 338 3e-93
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 324 3e-89
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 166 2e-41
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 156 1e-38
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 120 9e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 2e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 8e-15
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 78 8e-15
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.70
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 2.8
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 29 5.0
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 29 5.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 8.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 345 bits (847), Expect = 3e-95
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 345 bits (847), Expect = 3e-95
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 345 bits (847), Expect = 3e-95
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 345 bits (847), Expect = 3e-95
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 167 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 226
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 227 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 286
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 287 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 345 bits (847), Expect = 3e-95
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 197 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 256
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 257 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 316
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 317 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 345 bits (847), Expect = 3e-95
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 344 bits (845), Expect = 5e-95
Identities = 160/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 344 bits (845), Expect = 5e-95
Identities = 160/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 344 bits (845), Expect = 5e-95
Identities = 160/166 (96%), Positives = 165/166 (99%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 338 bits (830), Expect = 3e-93
Identities = 159/166 (95%), Positives = 164/166 (98%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGM
Sbjct: 211 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGM 270
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKI 329
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 324 bits (797), Expect = 3e-89
Identities = 152/166 (91%), Positives = 157/166 (94%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
RDIKEKLCYVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GM
Sbjct: 210 RDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGM 269
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKI
Sbjct: 270 EGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKI 329
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 166 bits (403), Expect = 2e-41
Identities = 79/166 (47%), Positives = 109/166 (65%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
R++KE CY+ALD T ++S++ SY LPD I I N FR PE LF+P +G
Sbjct: 214 REMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGT 268
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 422
E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I
Sbjct: 269 EWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRI 328
Query: 421 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 329 SASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 156 bits (379), Expect = 1e-38
Identities = 78/170 (45%), Positives = 105/170 (61%), Gaps = 13/170 (7%)
Frame = -2
Query: 781 RDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM 602
R +KEKLCY+A D EQE A ++ L + Y LPDG+VI +G ERF PE LFQP + +
Sbjct: 214 RQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINV 273
Query: 601 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--------- 449
E G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L
Sbjct: 274 EKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGN 333
Query: 448 --APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 311
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 334 TDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 120 bits (290), Expect = 9e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -2
Query: 691 YELPDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLY 527
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 526 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 356
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 355 FQQMWISKQEYDESGPSIVHRKC 287
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 102 bits (245), Expect = 3e-22
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 3/151 (1%)
Frame = -2
Query: 769 EKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGME 599
E+ YV D+++E + + SL+ P Q I N RF C E LF+P G++
Sbjct: 389 EQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLD 448
Query: 598 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 419
G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++
Sbjct: 449 TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVN 508
Query: 418 APPERKYSVWIGGSILASLSTFQQMWISKQE 326
P R + ++G I+AS STF+ IS Q+
Sbjct: 509 ISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 96.7 bits (230), Expect = 2e-20
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 23/181 (12%)
Frame = -2
Query: 775 IKEKLCYVALDFEQEMATA-ASSSSLEKSYELPDGQV-----ITIGNERFRCPEALFQPS 614
IKEK CYV D +E ++ ++Y+ + + +G ERF PE F P
Sbjct: 234 IKEKFCYVCPDVMKEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPE 293
Query: 613 FLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA--- 446
F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+
Sbjct: 294 FCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGR 353
Query: 445 -------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPS 305
P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPS
Sbjct: 354 LQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPS 413
Query: 304 I 302
I
Sbjct: 414 I 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 77.8 bits (183), Expect = 8e-15
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 25/192 (13%)
Frame = -2
Query: 778 DIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------------I 665
+ KE LC+V+ +F++ M A + ++ K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 664 TIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 485
+G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPG 323
Query: 484 IADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 314
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 324 FRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDER 379
Query: 313 GPSIVHRKCF*T 278
G S+ F T
Sbjct: 380 GDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 77.8 bits (183), Expect = 8e-15
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 25/192 (13%)
Frame = -2
Query: 778 DIKEKLCYVALDFEQEMATAAS---SSSLEKSYELPD------GQV-------------I 665
+ KE LC+V+ +F++ M A + ++ K Y +PD G V I
Sbjct: 204 ECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSI 263
Query: 664 TIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 485
+G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG
Sbjct: 264 HLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPG 323
Query: 484 IADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 314
+R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 324 FRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDER 379
Query: 313 GPSIVHRKCF*T 278
G S+ F T
Sbjct: 380 GDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -2
Query: 565 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 401
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 400 ----YSVWIGGSILASL-STFQQMWISKQEY 323
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCRWGESCD 460
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCRWGESCD 460
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCRWGESCD 460
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 735 RRWPPLHPAAPSRSLTNFPTVRSSPSE 655
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 536 LTDVHVALHDGVICGLVDAASFHTQERGLEESLWATESFVSDGDDLTVGKFVRLLEGAAG 715
+T +H A V+ G +DA + + R E + + D+LTV + +RL+ G
Sbjct: 497 ITGMHQATEGKVMIGGIDANANRAEAR---ELIGYCPQYNPIYDELTVWEHLRLVNALKG 553
Query: 716 CSGGHLLLEVKSDVAQLLLDV 778
SGG + K D LL +
Sbjct: 554 RSGGS---DFKMDAESLLKQI 571
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 777 TSRRSCATSLLTSSRRWPPLHPAAPS 700
+SRRS S+ TS++ WP +APS
Sbjct: 80 SSRRSSLASVSTSTKNWPSKSSSAPS 105
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 225 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 317
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 328 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 227
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 225 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 317
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 409 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 248
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,680,208
Number of Sequences: 27780
Number of extensions: 379307
Number of successful extensions: 1256
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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