Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14c10
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0800 - 7331444-7331539,7331617-7331742,7331830-7331907,733... 38 0.008
07_03_1729 + 29091765-29092358,29092468-29092539,29093187-29093330 36 0.041
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 34 0.094
01_06_1105 - 34559694-34559852,34560298-34560312,34560451-345605... 33 0.29
02_01_0121 + 890391-890429,890565-890730,891209-891769,892365-89... 32 0.50
04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268 31 0.66
02_01_0683 - 5067432-5067944 31 0.87
03_02_0312 - 7326092-7326148,7326415-7326540,7327744-7327821,732... 31 1.2
03_02_0171 + 6126685-6127107,6127237-6127581,6127701-6127997,612... 30 2.0
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 29 2.7
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 2.7
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 29 2.7
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 29 2.7
03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223 29 2.7
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 29 2.7
07_03_1685 + 28645284-28645454,28645681-28647069 29 3.5
05_05_0296 + 23918065-23918907,23919206-23919277,23919330-23919386 29 3.5
02_04_0597 - 24198112-24198462,24199249-24199389,24200322-242005... 29 3.5
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 29 3.5
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 29 4.7
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 29 4.7
07_03_1228 - 25009736-25010965 29 4.7
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145... 29 4.7
08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057 28 6.2
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 28 6.2
06_03_1395 + 29851763-29852610,29854080-29854251 28 6.2
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 28 6.2
04_01_0310 + 4197835-4197875,4197994-4198924 28 6.2
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 28 6.2
03_03_0145 + 14833043-14833113,14833544-14833662,14833834-148339... 28 8.1
01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005... 28 8.1
>12_01_0800 -
7331444-7331539,7331617-7331742,7331830-7331907,
7332515-7332747,7332832-7332871,7333016-7333070,
7333158-7333345,7333416-7333475,7333686-7333769,
7334817-7334903,7335178-7335246,7335354-7335410
Length = 390
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = -1
Query: 357 MKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKY 178
+K++RR NR A R+++ + +EL + ++DE NRIR+E + L SK
Sbjct: 296 LKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENTSLRDEVNRIRKEYDELLSKN 355
Query: 177 DALK 166
+LK
Sbjct: 356 SSLK 359
>07_03_1729 + 29091765-29092358,29092468-29092539,29093187-29093330
Length = 269
Score = 35.5 bits (78), Expect = 0.041
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Frame = -1
Query: 354 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIRE-----EIEAL 190
++++R +KNR AA R ++ +ELEN+ S+ +++EN R+RE +
Sbjct: 178 RRQKRMIKNRESAARSRARKQAYTNELENKISR-------LEEENQRLREHKAVADFSTF 230
Query: 189 RSKYDALKRFATMKSIPL 136
S D LK F T K P+
Sbjct: 231 PSCVDFLKAFLTQKLEPV 248
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 34.3 bits (75), Expect = 0.094
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Frame = -1
Query: 465 PTPCAEISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKN-RGYAASCRIKRIE 289
P ++ D+ + + ++ +++ + R+ I+R++ + +LKN A+ R+ ++E
Sbjct: 541 PDKAIDLVDEAAAKLKMEITSKPIELDEVDRE-IIRLEMEKLSLKNDTDKASKQRLSKLE 599
Query: 288 QKDELENEK----SQEW-HDMELM------QDENNRIREEIEALRSKYDALKRFATMK 148
E +K S+ W ++ LM ++E +R+ EIEA +YD L R A +K
Sbjct: 600 ADLESLKQKQKNLSEHWEYEKSLMTRIRSIKEETDRVNLEIEAAEREYD-LNRAAELK 656
>01_06_1105 -
34559694-34559852,34560298-34560312,34560451-34560522,
34560695-34561549
Length = 366
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = -1
Query: 393 KMRGLTRDQIVRMKQRR--RTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDEN 220
+ RG++ D ++ +RR R +KNR AA R ++ +ELEN+ S+ +++EN
Sbjct: 250 RKRGMSGDVADKLMERRQKRMIKNRESAARSRARKQAYTNELENKVSR-------LEEEN 302
Query: 219 NRIREEIEA 193
R++ + E+
Sbjct: 303 VRLKRQKES 311
>02_01_0121 +
890391-890429,890565-890730,891209-891769,892365-892845,
892952-893033,893818-894021
Length = 510
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 576 ATKRVTH-NQRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAE 448
ATK V + ID +++ + +E+G +KA+N AP P P E
Sbjct: 195 ATKVVLEATEEIDTKRVDPSQEKREIGWQKAVNWAPPDPYPEVE 238
>04_03_0592 - 17678172-17679415,17679751-17679897,17680656-17681268
Length = 667
Score = 31.5 bits (68), Expect = 0.66
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = -1
Query: 537 SKINMP-HDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKMRGLTRDQIV 361
SK N+ + L EL GR +A +P E ++DE ++I L++RG R +
Sbjct: 539 SKKNLSIYFLSELKGRPVAEIA--APEVLEEATEDE-INIVASIARACLRLRGEERPTMK 595
Query: 360 RMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQ 256
+++ ++++N+G+ + E DEL+ +S+
Sbjct: 596 QVEMSLQSIRNKGFRSG--TVSPEDSDELQTPQSE 628
>02_01_0683 - 5067432-5067944
Length = 170
Score = 31.1 bits (67), Expect = 0.87
Identities = 29/119 (24%), Positives = 56/119 (47%)
Frame = -1
Query: 519 HDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRR 340
HDL L ++MA + P S ++ ++ + N Q G D+ +++RR
Sbjct: 30 HDLSAL-----LDMAVVDPYISCNGSSITMIPVTEDEANAQPMNHG--NDE----RKKRR 78
Query: 339 TLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKR 163
+ NR A R+++ + DEL ++ S+ ++D N R+ E+ + SK+ + R
Sbjct: 79 LVSNRESARRSRVRKQRRLDELSSQVSE-------LRDTNQRLLVELNHMISKHARIVR 130
>03_02_0312 -
7326092-7326148,7326415-7326540,7327744-7327821,
7327916-7328178,7328699-7328741,7329581-7329632,
7329705-7329871,7330135-7330194,7330291-7330374,
7330654-7330758,7330840-7330899,7330976-7331032
Length = 383
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = -1
Query: 357 MKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKY 178
+K+++R NR A R+++ + +E+ N +L++ EN+ ++EE++ L+ K
Sbjct: 302 LKRQKRKQSNRESARRSRLRKQAEWEEVANRA-------DLLKQENSSLKEELKQLQEKC 354
Query: 177 DAL 169
++L
Sbjct: 355 NSL 357
>03_02_0171 +
6126685-6127107,6127237-6127581,6127701-6127997,
6129763-6129990,6130716-6131036
Length = 537
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = -1
Query: 489 AINMAPLSPTPCAE---ISDDELVSISVRDLNR-QLKMRGLTRDQIVRMKQRRRTLK 331
A+ +AP SP P AE + DD S ++ D+ ++KM G+++ RM + R L+
Sbjct: 227 ALPVAPQSPPPPAEHSDVDDDHSNSPNLSDVEMLRMKMEGMSKGMRERMAEYSRRLE 283
>11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/119 (23%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Frame = -1
Query: 555 NQRIDDSKINMPHDLKELGGR--KAINMAPLSPTPCAEISDDELVSISVR---DLNRQLK 391
NQ ++D K + D + G K + PT +E ++++ + V D++ + +
Sbjct: 1060 NQLLEDMKSRLSLDDDDNSGAAPKRATIQISRPTVLSEDGNEDVGAADVDSAYDMSSEEE 1119
Query: 390 MRGLTRDQI--VRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDEN 220
T D + VR + R R NR Y +S ++++ E+ +EKS+ ++ + +++EN
Sbjct: 1120 SGDNTGDVLPPVRKRSRGRPKVNR-YKSSGEAASMKRRKEVRSEKSKAANEGDSVEEEN 1177
>10_06_0105 -
10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 249 HDMELMQDENNRIREEIEALRSKYDALKRFAT 154
HD+ +ENN++R +E S + LK AT
Sbjct: 346 HDLAAAHEENNQLRTRLEVAESAFSHLKSEAT 377
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 306 RIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKRF 160
RI++ +K ++ N K +E E+ +++ R +EE LR K +RF
Sbjct: 449 RIRKELEKQDMLNRKREEQVRREMERNDRERRKEEERLLREKQKEEERF 497
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/85 (22%), Positives = 44/85 (51%)
Frame = -1
Query: 435 ELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQ 256
ELV+ +DLN + R LT+++ + + + R R +R+E+ + L ++
Sbjct: 645 ELVAQVEKDLNATFE-RELTKEREKIERLEKLAEEARVELDKLRAERVEENNALIRGRAS 703
Query: 255 EWHDMELMQDENNRIREEIEALRSK 181
+ME++ + + E+++++ SK
Sbjct: 704 VESEMEVLSKLRSEVEEQLQSVLSK 728
>03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223
Length = 219
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = -1
Query: 354 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIR 208
++++R +KNR AA R ++ +ELEN+ S+ +++EN R+R
Sbjct: 162 RRKKRMIKNRESAARSRARKQAYTNELENKISR-------LEEENKRLR 203
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/123 (21%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = -1
Query: 411 DLNRQLKMRGLTRDQIVR-MKQRRRTLKNRGYAASCRIKRIE-QKDELENEKSQEWHDME 238
++ RQ K++ + Q+ + +K+ +L + ++ +I+ + +K +LE+ + D+E
Sbjct: 389 EMERQQKLKNSEKMQLEKKLKESEASLNDLKVTSNMQIENMAMEKRQLESTIKRLMLDLE 448
Query: 237 LMQDENNRIREEIEALRSKYDALKRFATMKSIPLPAELDILP*TIFNWELGLKLLLYSIK 58
+ +NN + E+I L + D K+ K + + +IL T + E ++ LL ++
Sbjct: 449 KEKGKNNILSEQIIHLETSLDENKQ----KQLENISNTNILADTTKSHEKKIRELLKQLE 504
Query: 57 *DR 49
+R
Sbjct: 505 DER 507
>07_03_1685 + 28645284-28645454,28645681-28647069
Length = 519
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = -1
Query: 381 LTRDQIVRMKQRRRTLKNRGYAASCR--IKRIEQKDELENEKSQEWHDMELMQDENNRIR 208
+ +++I+ + R + N +S + R K + N++ + D + E ++
Sbjct: 182 IAKEKILVERSREKVCSNTSLISSLEGELDRTTHKLQTLNDRQRRREDSSHILMEIKKVT 241
Query: 207 EEIEALRSKYDALKRFATM 151
EIE L+S +A K ATM
Sbjct: 242 SEIEQLKSASNASKSEATM 260
>05_05_0296 + 23918065-23918907,23919206-23919277,23919330-23919386
Length = 323
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = -1
Query: 384 GLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIRE 205
G D++V +Q+R +KNR AA R ++ +ELEN+ + +++EN R+++
Sbjct: 252 GEIADKLVERRQKRM-IKNRESAARSRARKQAYTNELENKVLR-------LEEENERLKK 303
Query: 204 E 202
+
Sbjct: 304 Q 304
>02_04_0597 - 24198112-24198462,24199249-24199389,24200322-24200537,
24200626-24201561,24201655-24201816,24202026-24202304,
24202399-24203171,24206142-24207363
Length = 1359
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 291 EQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKY 178
E + + +++ WH + +DEN R+RE+++ ++K+
Sbjct: 1065 EVAEVAQADRANLWHQICATEDENMRLREDMDMEQTKF 1102
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 29.1 bits (62), Expect = 3.5
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = -1
Query: 567 RVTHNQRIDDSKINMPHDLKELGGRKAINMAPLSPTPCAEISDDELVSISVRDLNRQLKM 388
R+ + +R D ++ + +A +S A++ ++E +S S+ D ++L
Sbjct: 311 RILNEKRAKDEAAKDLQSVRMESEKSKSELAEISKVHQAKLKEEEEISKSIMDREKRLS- 369
Query: 387 RGLTRDQIVRMKQRRRT-LKNRGYAASCRIKRIEQK-DELENEKSQEWHDMELMQDENNR 214
I+ KQ R T N+ + R K ++++ D+LE L+Q+E +
Sbjct: 370 -------ILYQKQGRATQFANK----AARDKWLQKEIDDLERVLLSNRKQEGLLQEEIQK 418
Query: 213 IREEIEALRSKYDALK 166
+++EI L S ++ K
Sbjct: 419 LKDEINNLNSYIESRK 434
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/33 (27%), Positives = 22/33 (66%)
Frame = -1
Query: 300 KRIEQKDELENEKSQEWHDMELMQDENNRIREE 202
KR++++ EL + +EW + + +++E + RE+
Sbjct: 28 KRLDEEMELRRRRVKEWQEQKRLEEEEAKRREQ 60
>07_03_1731 - 29102403-29102720,29103529-29103735,29103937-29105210,
29105298-29105734,29106370-29106764,29106921-29107051,
29109034-29109052
Length = 926
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -1
Query: 402 RQLKMRGLTRDQIVRMKQRRRTLKNRGYAA-SCRIKRI-EQKDELENEKSQEWHDMELMQ 229
+ L+++GL +D+I+ Q + +A +K + +++D L E Q + +MQ
Sbjct: 816 KHLELQGLKKDEIISQVQLDFQESAKEISALRGTLKTVTDERDLLWQEAKQLRKTISIMQ 875
Query: 228 DENNRIREEIEAL 190
+E ++++IEAL
Sbjct: 876 NETASLKKKIEAL 888
>07_03_1228 - 25009736-25010965
Length = 409
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -1
Query: 291 EQKDELENEKSQEWHDMELMQDENNRIREEIE 196
E++D+ E ++ +E + ++ +DEN EE+E
Sbjct: 354 EEEDDEEEDEEEEEEEEDIEEDENEEEEEEVE 385
>02_01_0223 +
1453478-1453750,1455788-1456018,1456066-1456200,
1457918-1457971,1458417-1458482,1458593-1458679,
1459338-1459394,1459470-1459500,1459577-1459634,
1459710-1459761,1459881-1459917,1460008-1460210,
1460556-1460633,1460683-1460853,1461126-1461239
Length = 548
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = -1
Query: 357 MKQRRRTLKNRGYAASCRIKRIEQKDEL-ENEK---SQEWHDMELMQD----ENNRIREE 202
+K+++R NR A R+++ D L E K E ++ + D EN+ +R E
Sbjct: 433 LKKQKRKQSNRESARRSRLRKQNIMDSLIEAPKYLFQAECEELSVRADNLRAENSSLRAE 492
Query: 201 IEALRSKYDALKRFATMKSIPLPAELDILP 112
+E ++ +Y+AL L D +P
Sbjct: 493 LERIKKEYEALLSHNASLKEKLEGNSDSIP 522
>08_02_0750 + 20786096-20786475,20786689-20786822,20786906-20787057
Length = 221
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = -1
Query: 372 DQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELEN-EKSQEWHDMELMQDENNRIREEIE 196
D+IV ++Q LK +AAS I ++ + ELE+ E +Q +E +R++
Sbjct: 13 DEIVGLRQAMPRLKEDLHAASQAIPKLRAEKELESRELTQRNLKLEAELRSLEPLRQDAL 72
Query: 195 ALRS---KYDALKRFATMKSIPLPAELD 121
LRS K ++++ T K L EL+
Sbjct: 73 QLRSEAGKLQSIRQEMTAKVQGLLKELE 100
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = -1
Query: 510 KELGGRKAINMAPLSPT---PCAEISD-DELVSISVRDLNRQLKMRGLTRDQIVRMKQRR 343
KE+G + M L AEI + +E + R L + + + R+++ + R
Sbjct: 136 KEIGSSSSRRMRSLENALEKARAEIVEMEEEKRLMSRKLRKVAEEKAAAREELKLERHHR 195
Query: 342 RTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKR 163
R L+ + R Q+ E E + ELM++ + +E+E +++ +AL+R
Sbjct: 196 RELEGANGKLVKEVARARQRVETERKAR------ELMEEACEELSKEVEEDQAEVEALRR 249
>06_03_1395 + 29851763-29852610,29854080-29854251
Length = 339
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = -1
Query: 294 IEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKRFATMKSIPLP 133
+ + ++LE+EK+Q+ +++ + +EN R+R I+ ++ A+ ++ P
Sbjct: 285 VARTNQLESEKAQKEAEVQKVVEENVRLRAMIDKKEAQLQAMSEQCKFMALSRP 338
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/48 (25%), Positives = 30/48 (62%)
Frame = -1
Query: 306 RIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKR 163
R+K +++L N+K +ME + ++ N + +E+EA +++ + +K+
Sbjct: 415 RLKLEAAEEDLNNDKIAS-SEMETLIEQKNMLAKELEASKAEVEKIKK 461
>04_01_0310 + 4197835-4197875,4197994-4198924
Length = 323
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 327 RGYAASCRIKRIE-QKDELENEKSQEWHDMELMQDENNRIREE 202
RG S R+K +E Q L NEK+ ++ ++ ENN++ E
Sbjct: 14 RGLQLSRRVKELESQNTTLSNEKNDLERRVKRLEYENNKLSNE 56
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/82 (20%), Positives = 37/82 (45%)
Frame = -1
Query: 426 SISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWH 247
S + +D + K Q + + R R + + + R ++ +K+E E +K Q
Sbjct: 328 STNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMKKQQRKQ 387
Query: 246 DMELMQDENNRIREEIEALRSK 181
+ E +++ R +EE E + +
Sbjct: 388 EEEAQKEQKRREKEEAETRKQQ 409
>03_03_0145 +
14833043-14833113,14833544-14833662,14833834-14833991,
14834147-14834587
Length = 262
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 306 RIKRIEQKDE-LENEKSQEWHDMELMQDENNRIREEIEALRSK 181
++K + Q++ L+NE + + +QDEN +R EI L+++
Sbjct: 99 QVKSLRQENSTLQNESNYVTMERNELQDENGALRSEISDLQNE 141
>01_06_0787 -
31999632-32000045,32000128-32000214,32000295-32000584,
32000670-32000844,32000930-32001142,32001227-32001328,
32001418-32001822,32001922-32002134,32002312-32002357,
32002602-32002867,32003936-32004012,32004095-32004170,
32004339-32004418,32004945-32005036,32005132-32005171,
32005301-32005400,32005815-32005962,32006071-32006153,
32006207-32006383
Length = 1027
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = -1
Query: 354 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYD 175
K+RRR +R A RI K+ ++ Q ++ + EN+ ++ E+E L+ ++
Sbjct: 360 KKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQAVQ-ERHENSLLKSELEKLQDEHR 418
Query: 174 ALKRFATMKS 145
A++ A S
Sbjct: 419 AMRELAKKPS 428
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,647,281
Number of Sequences: 37544
Number of extensions: 300268
Number of successful extensions: 882
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -