Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14c07
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.50 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    26   1.2  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    25   2.7  
AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    23   8.1  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    23   8.1  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.50
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 169 AEVSVTGTSWLLSKQSLGNGLMEASERIVKKNTT 68
           AEV +TG   L  K+ +  GL  A ER     TT
Sbjct: 207 AEVLITGIDMLAKKEDVERGLQRALERTAVAATT 240


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 433 VSASSRLSIVVTLFRSR 383
           ++A   LS+V+TLFRSR
Sbjct: 89  IAAGGNLSVVITLFRSR 105


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 464 FYERMHNFGLGQRIIPTFD-SRYA-FPEPIPIKK 369
           F +R+ N+G+GQ + P  D SR+  +P+ I I++
Sbjct: 38  FEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQR 71


>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 RDYAIKYLFKEDMLSYFFRRVIKPFFVNS 299
           RD  ++YL   + +   FR VIK  FV++
Sbjct: 10  RDTPVRYLGYANEIGEAFRPVIKKIFVHA 38


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 RDYAIKYLFKEDMLSYFFRRVIKPFFVNS 299
           RD  ++YL   + +   FR VIK  FV++
Sbjct: 10  RDTPVRYLGYANEIGEAFRPVIKKIFVHA 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,755
Number of Sequences: 2352
Number of extensions: 16552
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)