Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14b22
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456550-1|CAG30436.1| 415|Homo sapiens PRKCABP protein. 177 5e-44
BC017561-1|AAH17561.1| 415|Homo sapiens protein interacting wit... 177 5e-44
AL049654-1|CAB41082.1| 415|Homo sapiens hypothetical protein pr... 177 5e-44
AL031587-8|CAB37478.1| 415|Homo sapiens protein interacting wit... 177 5e-44
AK222640-1|BAD96360.1| 415|Homo sapiens protein kinase C, alpha... 177 5e-44
AB026491-1|BAA89294.1| 415|Homo sapiens PICK1 protein. 177 5e-44
AF231710-1|AAF97502.1| 415|Homo sapiens PICK1 protein protein. 172 1e-42
U52521-1|AAA97923.1| 341|Homo sapiens arfaptin 1 protein. 33 1.2
BC105116-1|AAI05117.1| 341|Homo sapiens ADP-ribosylation factor... 33 1.2
BC105114-1|AAI05115.1| 341|Homo sapiens ADP-ribosylation factor... 33 1.2
BC103759-1|AAI03760.1| 373|Homo sapiens ARFIP1 protein protein. 33 1.2
AK096509-1|BAC04806.1| 245|Homo sapiens protein ( Homo sapiens ... 33 1.2
AF124489-1|AAD29390.1| 373|Homo sapiens arfaptin-1b protein. 33 1.2
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 33 1.6
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 33 1.6
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 33 1.6
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 33 1.6
AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein. 33 1.6
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 33 1.6
AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid anti... 33 1.6
X97444-1|CAA66073.1| 146|Homo sapiens transmembrane protein pro... 32 2.7
AL365440-3|CAH70558.1| 313|Homo sapiens olfactory receptor, fam... 31 4.8
AB065641-1|BAC05867.1| 313|Homo sapiens seven transmembrane hel... 31 4.8
>CR456550-1|CAG30436.1| 415|Homo sapiens PRKCABP protein.
Length = 415
Score = 177 bits (430), Expect = 5e-44
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 790 KPILXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVE 611
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 229 KPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVS 288
Query: 610 TGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNET 431
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 289 TGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDC 348
Query: 430 LEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 349 YA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>BC017561-1|AAH17561.1| 415|Homo sapiens protein interacting with
PRKCA 1 protein.
Length = 415
Score = 177 bits (430), Expect = 5e-44
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 790 KPILXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVE 611
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 229 KPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVS 288
Query: 610 TGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNET 431
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 289 TGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDC 348
Query: 430 LEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 349 YA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>AL049654-1|CAB41082.1| 415|Homo sapiens hypothetical protein
protein.
Length = 415
Score = 177 bits (430), Expect = 5e-44
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 790 KPILXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVE 611
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 229 KPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVS 288
Query: 610 TGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNET 431
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 289 TGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDC 348
Query: 430 LEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 349 YA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>AL031587-8|CAB37478.1| 415|Homo sapiens protein interacting with
PRKCA 1 protein.
Length = 415
Score = 177 bits (430), Expect = 5e-44
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 790 KPILXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVE 611
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 229 KPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVS 288
Query: 610 TGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNET 431
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 289 TGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDC 348
Query: 430 LEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 349 YA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>AK222640-1|BAD96360.1| 415|Homo sapiens protein kinase C, alpha
binding protein variant protein.
Length = 415
Score = 177 bits (430), Expect = 5e-44
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 790 KPILXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVE 611
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 229 KPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVS 288
Query: 610 TGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNET 431
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 289 TGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDC 348
Query: 430 LEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 349 YA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>AB026491-1|BAA89294.1| 415|Homo sapiens PICK1 protein.
Length = 415
Score = 177 bits (430), Expect = 5e-44
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -3
Query: 790 KPILXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVE 611
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 229 KPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVS 288
Query: 610 TGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNET 431
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 289 TGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDC 348
Query: 430 LEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 349 YA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>AF231710-1|AAF97502.1| 415|Homo sapiens PICK1 protein protein.
Length = 415
Score = 172 bits (419), Expect = 1e-42
Identities = 83/161 (51%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Frame = -3
Query: 790 KPILXDMG-TYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRV 614
KP+L D+ TYLNKAIPDT+LTI+KY D KFEYLSYCLKVKEMDDEEY AL EPLYRV
Sbjct: 228 KPMLTDLNITYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRV 287
Query: 613 ETGNYEYRLILRCRQDARTRFARLRSDXXXXXXXXXXXKAQDVAHQLKKFIQGLAVYHNE 434
TGNYEYRLILRCRQ+AR RF+++R D QD+ QL++ + ++ Y+N+
Sbjct: 288 STGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYND 347
Query: 433 TLEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIE 311
++ ++ +FP+EVDL+ Y + D ++E+ E
Sbjct: 348 CYA-VLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEE 387
>U52521-1|AAA97923.1| 341|Homo sapiens arfaptin 1 protein.
Length = 341
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 781 LXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMD 662
+ + T +NK I DT +T+++Y + EY +Y ++E++
Sbjct: 207 IASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN 246
>BC105116-1|AAI05117.1| 341|Homo sapiens ADP-ribosylation factor
interacting protein 1 (arfaptin 1) protein.
Length = 341
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 781 LXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMD 662
+ + T +NK I DT +T+++Y + EY +Y ++E++
Sbjct: 207 IASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN 246
>BC105114-1|AAI05115.1| 341|Homo sapiens ADP-ribosylation factor
interacting protein 1 (arfaptin 1) protein.
Length = 341
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 781 LXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMD 662
+ + T +NK I DT +T+++Y + EY +Y ++E++
Sbjct: 207 IASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN 246
>BC103759-1|AAI03760.1| 373|Homo sapiens ARFIP1 protein protein.
Length = 373
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 781 LXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMD 662
+ + T +NK I DT +T+++Y + EY +Y ++E++
Sbjct: 239 IASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN 278
>AK096509-1|BAC04806.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ39190 fis, clone OCBBF2004647, highly similar to
ARFAPTIN 1. ).
Length = 245
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 781 LXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMD 662
+ + T +NK I DT +T+++Y + EY +Y ++E++
Sbjct: 111 IASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN 150
>AF124489-1|AAD29390.1| 373|Homo sapiens arfaptin-1b protein.
Length = 373
Score = 33.1 bits (72), Expect = 1.2
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -3
Query: 781 LXDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMD 662
+ + T +NK I DT +T+++Y + EY +Y ++E++
Sbjct: 239 IASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN 278
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2983 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 3042
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 3043 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 3090
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2983 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 3042
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 3043 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 3090
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2983 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 3042
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 3043 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 3090
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2983 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 3042
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 3043 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 3090
>AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.
Length = 3060
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2657 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 2716
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 2717 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 2764
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2983 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 3042
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 3043 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 3090
>AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid antigen 1
eB protein.
Length = 3060
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = -3
Query: 358 KSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDN---EHND-ATEQLL 191
K + +EDV + A ++E+ L VN+T+E ++ + N + ND +++ +
Sbjct: 2657 KDVAKPNEDVPSHVLITAPPMKEHLQLGVNNTKEKSTSTQKDSPLNDMIQSNDLCSKESI 2716
Query: 190 PGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQ--NGLMDD 50
G T +I + + L++L+ + D G ND S + NGL +D
Sbjct: 2717 SGGGT-EISQFTPESIEATLSILSRKHVEDVGKNDFLQSERCANGLGND 2764
>X97444-1|CAA66073.1| 146|Homo sapiens transmembrane protein
protein.
Length = 146
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = -3
Query: 391 EVDLSQNCFQYKSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDD 224
+ D+ + CF+ K GQI + + D+++ E++ Y +++ + + +K R +D
Sbjct: 86 DYDMFEVCFESKETGQIPDQLVILDMKHGVEVKNYREIAKVEKLKPLEVKLRHLED 141
>AL365440-3|CAH70558.1| 313|Homo sapiens olfactory receptor, family
10, subfamily K, member 1 protein.
Length = 313
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 596 FIIPGFHSVQRLLQSVIPVFLVIHLFDLQT 685
F++ GF S+ RL Q + +FL+++LF L T
Sbjct: 12 FVVLGFSSLARLQQLLFVIFLLLYLFTLGT 41
>AB065641-1|BAC05867.1| 313|Homo sapiens seven transmembrane helix
receptor protein.
Length = 313
Score = 31.1 bits (67), Expect = 4.8
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 596 FIIPGFHSVQRLLQSVIPVFLVIHLFDLQT 685
F++ GF S+ RL Q + +FL+++LF L T
Sbjct: 12 FVVLGFSSLARLQQLLFVIFLLLYLFTLGT 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,769,975
Number of Sequences: 237096
Number of extensions: 2125661
Number of successful extensions: 6280
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6273
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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