Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14b18
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.58 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.1  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   4.1  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    24   5.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.5  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -1

Query: 212 RSA*YEDADSFHSYGRSKRKRDAVAELPSRESAAVSNLENISFREVLLG 66
           RSA  E   S     +  +K+     LP  E+  +   ENI   +VL G
Sbjct: 141 RSAQRETPKSSGGQSKQPKKKKKKRSLPKPEAVVIEKCENIDLAKVLKG 189


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 166 GQSGSATLWLNSPHGSPLLSQISRTYHSEKYCSAVNQFSNEMEQINP 26
           G S SATL+ N PH   ++  + R + S +      QF  +     P
Sbjct: 687 GFSLSATLFTNHPHRLEIIPNLLRVFVSIEMTGQSVQFEQKFNYRRP 733


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 27/109 (24%), Positives = 40/109 (36%)
 Frame = +3

Query: 255 PSGRPSTNSKTLDPLSPTSQEAAAATLHPVFLNALSASSCEKPRXXXXXXXXXXXXXXXL 434
           P   P T  K  + LSPT    AAA    +   A +A+S  KP                 
Sbjct: 548 PMFNPDTR-KFENMLSPTMASQAAAAAAAISAAAAAANSSFKPDFSTAAAVAN------- 599

Query: 435 TLHSRNFSKNRCKCPARSYRSFAFDFSEVEGSSSRDCCSLSRAAISSGV 581
           +  S  FS         +  +F  DF  +  SS+    +   AA+++ V
Sbjct: 600 SFKSEQFSSAAAAVANYALGTFKSDFPPIPNSSAAAAAAAVAAAVAASV 648


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 679 LAAAGRNYESSLAQLCAALDQPKRAQQTLIQVITPEE 569
           + A+G N    +  LC+    P  A++ L++VI  +E
Sbjct: 87  IIASGENDRVQVIALCSISKIPSCARRCLLEVIATQE 123


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 283 FELVDGLPDGPILQSLLKQPQIQRGL-LNTRML 188
           ++ VDGL DGP  +    +P+ +RG  L+T+ L
Sbjct: 169 YDDVDGLGDGPTARDATVRPE-ERGCGLSTKQL 200


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 136 NSPHGSPLLSQISRTYHSEKYCSAVNQFSNEMEQINPSTSRM 11
           NSP GS L +  S         S+ N  SN     +PS SRM
Sbjct: 185 NSPLGSLLAAVTSPVLSRISSASSPNLSSNGSTLSSPSGSRM 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,601
Number of Sequences: 2352
Number of extensions: 13667
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)