Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14b18
(716 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 24 1.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 24 1.2
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 23 2.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.7
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.7
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.7
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.2
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = -2
Query: 241 SLLKQPQIQRGLLNTRML----IAFIAMVGQSGSATLWLNSPHGSPLLSQISRTYHSEKY 74
SL K P + LNTRML AF +GS LN + ++ + +K
Sbjct: 468 SLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKL 527
Query: 73 CSAVNQFSNEMEQIN 29
N F+++++ I+
Sbjct: 528 NMFYNNFNSDIKSIS 542
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.2
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = -2
Query: 241 SLLKQPQIQRGLLNTRML----IAFIAMVGQSGSATLWLNSPHGSPLLSQISRTYHSEKY 74
SL K P + LNTRML AF +GS LN + ++ + +K
Sbjct: 468 SLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKL 527
Query: 73 CSAVNQFSNEMEQIN 29
N F+++++ I+
Sbjct: 528 NMFYNNFNSDIKSIS 542
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 592 IQVITPEEIAARLSEQQSREEEPSTSEKSNANDLYE 485
+ +T EE+ RL +QS + + ++ AND+ E
Sbjct: 14 VGALTIEELKTRLHTEQSVCKTETGIDQQKANDVIE 49
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 364 ADRALRNTGCNVAAAASWLVGDRGSSVFELVDGL 263
+DR R+ C + A SWL +R ++++G+
Sbjct: 679 SDRLSRDLYCGIRAGLSWL--ERIQIALDVLEGI 710
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 364 ADRALRNTGCNVAAAASWLVGDRGSSVFELVDGL 263
+DR R+ C + A SWL +R ++++G+
Sbjct: 717 SDRLSRDLYCGIRAGLSWL--ERIQIALDVLEGI 748
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 516 EVEGSSSRDCCSLSRAAISSGVIT*IRV 599
EV G +SR C ++ R + S V +RV
Sbjct: 137 EVIGGASRGCTAVLRCVVPSFVKDLVRV 164
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 516 EVEGSSSRDCCSLSRAAISSGVIT*IRV 599
EV G +SR C ++ R + S V +RV
Sbjct: 137 EVIGGASRGCTAVLRCVVPSFVKDLVRV 164
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 82 EKYCSAVNQFSNEMEQINPSTSRM 11
E CS ++ F NE +PS S M
Sbjct: 115 EYECSRIDYFPNEEYSPDPSDSTM 138
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 683 KTGGGRP*LRVVFGSTLRGSGPA 615
KT GG + F + LRG+G A
Sbjct: 265 KTEGGNAFFKGAFSNILRGTGGA 287
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 683 KTGGGRP*LRVVFGSTLRGSGPA 615
KT GG + F + LRG+G A
Sbjct: 265 KTEGGNAFFKGAFSNILRGTGGA 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,504
Number of Sequences: 438
Number of extensions: 3718
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -