Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14b15
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 395 e-110
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 392 e-109
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 388 e-108
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 379 e-105
03_01_0034 + 318432-318825,318902-319851 152 3e-37
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 151 8e-37
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 151 8e-37
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 150 1e-36
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 150 1e-36
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 150 1e-36
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 150 1e-36
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 147 9e-36
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 70 2e-12
01_06_1014 - 33810112-33811995 31 0.74
12_02_1026 - 25478462-25479232,25479249-25479821 29 4.0
03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508 29 4.0
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 29 5.2
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 5.2
07_03_0700 + 20797600-20798064 28 6.9
07_01_0008 - 56178-57095 28 6.9
09_02_0118 - 4451228-4452565 28 9.2
04_01_0280 - 3757107-3758180 28 9.2
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 395 bits (972), Expect = e-110
Identities = 176/206 (85%), Positives = 194/206 (94%)
Frame = -2
Query: 749 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 570
QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV EIT
Sbjct: 233 QIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT 292
Query: 569 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFK 390
NA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK
Sbjct: 293 NAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFK 352
Query: 389 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEG 210
GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE +SR++HKFDLMYAKRAFVHWYVGEG
Sbjct: 353 CGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
Query: 209 MEEGEFSEAREDLAALEKDYEEVGMD 132
MEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 413 MEEGEFSEAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 392 bits (965), Expect = e-109
Identities = 174/207 (84%), Positives = 195/207 (94%)
Frame = -2
Query: 749 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 570
Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Query: 569 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFK 390
N+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK
Sbjct: 293 NSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFK 352
Query: 389 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEG 210
GINYQPP+VVP GDLAKVQRAVCM+SN+T++ E +SR++HKFDLMY+KRAFVHWYVGEG
Sbjct: 353 CGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEG 412
Query: 209 MEEGEFSEAREDLAALEKDYEEVGMDS 129
MEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 413 MEEGEFSEAREDLAALEKDYEEVGAES 439
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 388 bits (956), Expect = e-108
Identities = 173/206 (83%), Positives = 194/206 (94%)
Frame = -2
Query: 749 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 570
Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEIT
Sbjct: 233 QVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Query: 569 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFK 390
N+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK
Sbjct: 293 NSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFK 352
Query: 389 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEG 210
GINYQPP+VVPGGDLAKVQRAVCM+SN+T++ E +SR++ KFDLMY+KRAFVHWYVGEG
Sbjct: 353 CGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEG 412
Query: 209 MEEGEFSEAREDLAALEKDYEEVGMD 132
MEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 413 MEEGEFSEAREDLAALEKDYEEVGSE 438
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 379 bits (933), Expect = e-105
Identities = 167/206 (81%), Positives = 190/206 (92%)
Frame = -2
Query: 749 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 570
Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ SV EIT
Sbjct: 314 QVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEIT 373
Query: 569 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFK 390
N+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ +IKT+RT+QFVDWCPTGFK
Sbjct: 374 NSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFK 433
Query: 389 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEG 210
GINYQPPT VPGGDLAKV+RAVCM+SN TA+AE +SR++ KFDLMYAKRAFVHWYVGEG
Sbjct: 434 CGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEG 493
Query: 209 MEEGEFSEAREDLAALEKDYEEVGMD 132
MEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 494 MEEGEFSEAREDLAALEKDYEEVGAE 519
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 152 bits (369), Expect = 3e-37
Identities = 70/200 (35%), Positives = 117/200 (58%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKST 352
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PPT ++ A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 353 VCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 405 EMEFTEAESNMNDLVSEYQQ 424
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 151 bits (365), Expect = 8e-37
Identities = 69/200 (34%), Positives = 116/200 (58%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP ++ A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 353 VCDIPP--------RGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 405 EMEFTEAESNMNDLVAEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 151 bits (365), Expect = 8e-37
Identities = 69/200 (34%), Positives = 116/200 (58%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP ++ A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 353 VCDIPPN--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 405 EMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 150 bits (364), Expect = 1e-36
Identities = 69/200 (34%), Positives = 116/200 (58%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP ++ A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 353 VCDIPP--------IGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 405 EMEFTEAESNMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 150 bits (364), Expect = 1e-36
Identities = 69/200 (34%), Positives = 115/200 (57%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 254 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 313
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 314 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 373
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP + A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 374 VCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 425
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 426 EMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 150 bits (364), Expect = 1e-36
Identities = 69/200 (34%), Positives = 115/200 (57%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 233 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 292
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 293 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP + A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 353 VCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 404
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 405 EMEFTEAESNMNDLVSEYQQ 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 150 bits (363), Expect = 1e-36
Identities = 69/200 (34%), Positives = 115/200 (57%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 413 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 472
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 473 MWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 532
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP + A + N+T+I E + R++ +F M+ ++AF+HWY GEGM+
Sbjct: 533 VCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMD 584
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 585 EMEFTEAESNMNDLVSEYQQ 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 147 bits (356), Expect = 9e-36
Identities = 68/200 (34%), Positives = 114/200 (57%)
Frame = -2
Query: 743 VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 564
+S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T
Sbjct: 249 MSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQ 308
Query: 563 CFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVG 384
++ N M DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K
Sbjct: 309 MWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 368
Query: 383 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGME 204
+ PP + A + N+T+I E + R++ +F M+ ++AF+HWY EGM+
Sbjct: 369 VCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMD 420
Query: 203 EGEFSEAREDLAALEKDYEE 144
E EF+EA ++ L +Y++
Sbjct: 421 EMEFTEAESNMNDLVAEYQQ 440
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 69.7 bits (163), Expect = 2e-12
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Frame = -2
Query: 746 IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEIT 570
++S+ T +LR+ G +N DL +L+P PR HF + Y P+ + + + +V ++
Sbjct: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVM 294
Query: 569 NACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWC 405
+ N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F++W
Sbjct: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWG 354
Query: 404 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHW 225
P A +Q + ML+N T+I +S+ +++ + K+AF+
Sbjct: 355 P--------------------ASIQVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDN 394
Query: 224 Y----VGEGMEEGEFSEAREDLAALEKDYE 147
Y + E + EF E+RE + +L +Y+
Sbjct: 395 YRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.74
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 248 AKRAFVHWYVGEGMEEGEFSEAREDL 171
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>12_02_1026 - 25478462-25479232,25479249-25479821
Length = 447
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -1
Query: 411 LVPDRIQGGDKLSATNCGTGWRFGEGAARRVHA----VQYYCHSRGV 283
LV + GGD LS R E AARRV YCH+RGV
Sbjct: 99 LVMELATGGDLLSRLAALPRRRLPESAARRVFVQLVDALSYCHARGV 145
>03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508
Length = 234
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 223 YQCTNARLAYIKSNLWLRRDHASAMAVVLDSMH 321
Y+ N R+ Y+KSN W H A + ++D++H
Sbjct: 112 YKIENYRVLYLKSNCW----HEGASSEIIDAIH 140
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 160 RKTTKRWEWIPVRAREKAARNINFTIYFLGCLWILLRSRVCFSLWL 23
R+ T +W+ P +E+A + T+ + W LR R C + +L
Sbjct: 343 RQETVQWKLFPFSLQERAKQWYTSTVGCVNGSWEKLRDRFCLAFFL 388
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 707 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 579
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>07_03_0700 + 20797600-20798064
Length = 154
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 280 LASTTSLI*CMPSVHS--CIGTWERGWRKASFQKPVRI 173
+ S+ +++ C P + C+G W+ WR+A ++ + I
Sbjct: 69 MVSSAAVLFCFPGIWGPFCLGLWKTIWRRAGWRGLINI 106
>07_01_0008 - 56178-57095
Length = 305
Score = 28.3 bits (60), Expect = 6.9
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 182 GLLKTRLPPSPLPRTNARMHAWHTSNQTCG*GETTPLLWQ*YWTACTRRAA-PSPNLHPV 358
G + L PS P AR+H+W N T Q +A +RR A P +LHP+
Sbjct: 118 GTAASHLAPSSAP---ARLHSWIHYNATSA-------TLQLRLSATSRRPALPLLSLHPL 167
Query: 359 PQLVADSLSPP*ILSGTSLQTEWCVSF*W 445
P L +L+G + C F W
Sbjct: 168 PPSALLLLRTKPMLAGFTSSATNCTLFAW 196
>09_02_0118 - 4451228-4452565
Length = 445
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +2
Query: 197 RLPPSPLPRTNARMHAWHTSNQTCG*GETTPLLWQ*YWTACT----RRAAPSPNLHPVPQ 364
RL P+ L R H W + C PLL + A T AP LHP
Sbjct: 28 RLAPADLLRAALVCHRWRRAAARCVMAAPPPLLGYFFHPADTPLTAHIVAPIAALHPAAF 87
Query: 365 LVADSLSP 388
+ DS SP
Sbjct: 88 VPLDSSSP 95
>04_01_0280 - 3757107-3758180
Length = 357
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -3
Query: 160 RKTTKRWEWIPVRAREKAARNINFTIYFLGCLWILLRSRVCFSLW 26
+K T RW+ P E+A + T+ + W L+ R+C + +
Sbjct: 74 KKETVRWKLFPFSLHERAKQWYTSTVGCVNSDWEKLQDRLCLAFF 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,544,073
Number of Sequences: 37544
Number of extensions: 516327
Number of successful extensions: 1557
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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