Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14b14
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    26   1.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   4.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   6.9  

>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 355 T*RAGCFTENWKIGTYFLFYYRALYNKSSI 266
           T + GC  +NW  GT+  +Y+   Y  ++I
Sbjct: 190 TAKIGCAMQNWVSGTWQTYYFVCNYAVTNI 219


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 164  CLNNWLMVLITYCANRRNKFSIWPSYSVG 250
            C N  +  ++ Y    +N+F +WP    G
Sbjct: 1716 CPNTRIQAILRYQVLWKNRFQVWPRMEEG 1744


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 ALLTYMRVYISCLLCLNNWLMVLITYCANR 211
           ALLT++  YI    CL N     I Y A+R
Sbjct: 467 ALLTFLMFYIKKFACLVNSNPSAILYRASR 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,597
Number of Sequences: 2352
Number of extensions: 14482
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)