Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14b13
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    29   0.050
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   0.81 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   2.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   7.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.9  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 0.050
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 354 LVSWLPYFKNTFVKPFTDSPD 292
           +V WLP+F    V+PF  +PD
Sbjct: 382 IVCWLPFFVLALVRPFLKNPD 402


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = -3

Query: 630 LIRLGIWHILPNSE--IKDVADL--KTNNTFHELKNSRN 526
           LI  G+ ++   S    +D+AD   ++N TFHELK  R+
Sbjct: 12  LIMCGVQNLRARSVNIFQDIADCVDRSNMTFHELKKLRD 50


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 200 SWRLSYRTNWYSPENLRALRLLFKLFEREH 111
           SWR  +R NW S +  +  +L  ++  REH
Sbjct: 146 SWRPIFRQNWASLQPYK--KLSVEVVRREH 173


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 318 VKPFTDSPDYSFTTDE 271
           +K  +D+ DYS TTDE
Sbjct: 224 IKHESDNSDYSHTTDE 239


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 774 TIKTVQRKVVFSNCINFPRNLNYDSPSS 691
           T+K V  KV          NL Y+SPSS
Sbjct: 244 TLKEVDNKVYGMALSPVTHNLYYNSPSS 271


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 170 YSPENLRALRLLFKLF 123
           Y P+ LR +  LFKLF
Sbjct: 100 YYPQLLREMSALFKLF 115


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 170 YSPENLRALRLLFKLF 123
           Y P+ LR +  LFKLF
Sbjct: 100 YYPQLLREMSALFKLF 115


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 581 SLISEFGSICQIPNLMRKLSTIE 649
           S IS+ G   +  NL+ KLSTIE
Sbjct: 545 SRISKQGLFRRFYNLLGKLSTIE 567


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 297 PDYSFTTDEYLAVVPDLPILMLH 229
           P+     DE+ +V P  P+L+LH
Sbjct: 868 PNLVEVLDEFPSVRPFAPLLLLH 890


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 588 IKDVADLKTNNTFHELK 538
           +K + DL+T NT H  K
Sbjct: 389 LKKIPDLRTLNTLHSEK 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,505
Number of Sequences: 438
Number of extensions: 4938
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)