Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14b09
(781 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1721 - 39426957-39428005,39428812-39428839 311 5e-85
05_04_0255 + 19462668-19462695,19463443-19464491 305 2e-83
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 290 1e-78
08_01_0142 - 1121762-1122822,1123087-1123114 284 5e-77
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 240 8e-64
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 95 4e-20
04_03_0368 + 15004949-15005659,15005789-15005848 37 0.021
10_08_0948 + 21754985-21755290,21756042-21756297,21756845-217569... 34 0.11
06_03_0828 + 25137782-25138312,25141349-25141588 34 0.15
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 33 0.34
06_01_0022 - 218860-219053,219707-220010 32 0.44
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 32 0.59
06_02_0238 - 13357877-13357954,13358186-13358302,13358537-133586... 32 0.59
02_02_0628 + 12365109-12365150,12366315-12366411,12366489-123665... 31 0.78
02_02_0415 - 9981345-9981440,9981716-9981784,9982035-9982155,998... 31 0.78
01_06_0352 + 28638453-28639391,28639486-28640034,28640388-286411... 31 0.78
07_01_1073 + 9566727-9566963,9566992-9567180 31 1.0
08_01_0905 - 8928261-8928875 30 1.8
08_01_0477 - 4205562-4206464 30 2.4
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 30 2.4
02_05_0285 - 27498946-27499122,27499944-27500108,27500828-275009... 30 2.4
09_02_0028 + 3109502-3110232,3110274-3110727 29 3.1
08_01_0331 + 2966362-2966477,2966561-2966924,2966949-2967050,296... 29 3.1
06_01_0093 - 776567-777335,777449-777747 29 3.1
04_01_0363 + 4754650-4755912 29 3.1
01_07_0274 + 42428947-42429108,42429405-42430178 29 3.1
08_02_0574 - 18867623-18868033,18869751-18870209 29 4.1
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 29 5.5
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 29 5.5
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 29 5.5
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 28 7.2
06_03_0139 + 17130980-17131594,17131740-17132009 28 7.2
04_04_0920 + 29429114-29430934 28 7.2
03_02_0119 - 5725588-5726688,5726793-5726894 28 7.2
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 9.6
10_01_0098 - 1193184-1193703,1193814-1193872 28 9.6
07_03_1293 - 25563431-25563545,25564078-25564196,25564300-255644... 28 9.6
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464... 28 9.6
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 28 9.6
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 28 9.6
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 311 bits (763), Expect = 5e-85
Identities = 151/245 (61%), Positives = 180/245 (73%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 601
GIKVDKG V + G+ E TTQG DDL +RCA+Y + G FAKWR VLKIG N PS +I
Sbjct: 101 GIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSID 160
Query: 600 ENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLE 421
NA LARYA ICQ +VPIVEPE+L DG HD++R VTE VLAA YKALN+HHV LE
Sbjct: 161 LNAQGLARYAIICQENGLVPIVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLE 220
Query: 420 GTLLKPNMVTAGQSCKKTYTPNDVARATVTALLRTVPAAVPGVTFLSGGQSEEEASVHLN 241
G+LLKPNMVT G KK +P +A TV AL RTVPAAVP + FLSGGQSEEEA+V+LN
Sbjct: 221 GSLLKPNMVTPGSESKKV-SPQLIAEYTVRALQRTVPAAVPAIVFLSGGQSEEEATVNLN 279
Query: 240 AINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGQASLGKYVA 61
A+N + K+PW L+FS+GRALQ S L+AWGGKTEN++ Q+ I R KAN +A+LG Y
Sbjct: 280 AMNKLSTKKPWALSFSFGRALQQSTLKAWGGKTENVVKAQKAFITRCKANSEATLGTYQG 339
Query: 60 GSVTG 46
+V G
Sbjct: 340 DAVLG 344
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 305 bits (750), Expect = 2e-83
Identities = 149/245 (60%), Positives = 177/245 (72%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 601
GIKVDKG + + G+E E TTQG DDL +RCA+Y + G FAKWR VLKIG N PS AI
Sbjct: 101 GIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAID 160
Query: 600 ENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLE 421
NA LARYA ICQ +VPIVEPE+L DG HD+DR V+EVVLAA YKALN+HHV LE
Sbjct: 161 LNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLE 220
Query: 420 GTLLKPNMVTAGQSCKKTYTPNDVARATVTALLRTVPAAVPGVTFLSGGQSEEEASVHLN 241
GTLLKPNMVT G KK +P +A TV L RTVPAAVP + FLSGGQSEEEA+++LN
Sbjct: 221 GTLLKPNMVTPGSDAKKV-SPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLN 279
Query: 240 AINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGQASLGKYVA 61
A+N + K+PW L+FS+GRALQ S L+AW GK ENI + + R KAN +A+LG Y
Sbjct: 280 AMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKG 339
Query: 60 GSVTG 46
+V G
Sbjct: 340 DAVLG 344
>06_03_0718 + 23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 290 bits (711), Expect = 1e-78
Identities = 143/239 (59%), Positives = 169/239 (70%), Gaps = 1/239 (0%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGR-NTPSYQAI 604
GIKVDKG V + G+ E TTQGLD L RCA+Y + G FAKWR VLKIG PS A+
Sbjct: 292 GIKVDKGTVDIAGTNGETTTQGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAV 351
Query: 603 QENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYL 424
++NA LARYA ICQ +VPIVEPE+L DG HD+ VTE VLAAVYK+LNDH V L
Sbjct: 352 KQNAEGLARYALICQENGLVPIVEPEILTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLL 411
Query: 423 EGTLLKPNMVTAGQSCKKTYTPNDVARATVTALLRTVPAAVPGVTFLSGGQSEEEASVHL 244
EGTLLKPNMVT G K + TV AL RTVP AVPG+ FLSGGQSEEEAS +L
Sbjct: 412 EGTLLKPNMVTPGSDSPKVGA-EVIGEYTVAALRRTVPPAVPGIVFLSGGQSEEEASQNL 470
Query: 243 NAINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGQASLGKY 67
NA+N +++ +PW LTFS+GRALQ S ++ WGGK EN+ A Q + R KAN +A+LGKY
Sbjct: 471 NAMNKLEVLKPWTLTFSFGRALQQSTIKKWGGKKENVAAAQAAFLARCKANSEATLGKY 529
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 284 bits (697), Expect = 5e-77
Identities = 146/249 (58%), Positives = 171/249 (68%), Gaps = 4/249 (1%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGR--NTPSYQA 607
GIKVDKG V L G++ E TTQG D L +RC +Y G FAKWR VL IGR + PS A
Sbjct: 101 GIKVDKGTVELAGTDRETTTQGHDGLGERCRRYYAAGARFAKWRAVLSIGRASSRPSQLA 160
Query: 606 IQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVY 427
+ NA LARYA ICQ +VPIVEPE+L DGEH ++ +VTE VLAA YKAL+DHHV
Sbjct: 161 VDANAQGLARYAIICQENGLVPIVEPEILVDGEHGIEACAEVTERVLAACYKALSDHHVL 220
Query: 426 LEGTLLKPNMVTAGQSCKKTYTPNDVARATVTALLRTVPAAVPGVTFLSGGQSEEEASVH 247
LEGTLLKPNMVT G + P VA TV ALLRTVP AVP + FLSGGQSEEEA+ +
Sbjct: 221 LEGTLLKPNMVTPGSDAARA-PPEVVAEHTVRALLRTVPPAVPAIVFLSGGQSEEEATRN 279
Query: 246 LNAINAVDL--KRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGQASLG 73
LNA+N V K+PW LTFS+GRALQ S L+AW GK EN+ Q L+ R +AN QA+LG
Sbjct: 280 LNAMNQVASRGKKPWSLTFSFGRALQQSTLKAWAGKAENVGKAQAALLARCRANSQATLG 339
Query: 72 KYVAGSVTG 46
Y + G
Sbjct: 340 AYAGDAAAG 348
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 240 bits (588), Expect = 8e-64
Identities = 126/240 (52%), Positives = 159/240 (66%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQ 601
GIKVDKG+VPL GS +E QGLD LA R A Y + G FAKWR V+ I N PS A++
Sbjct: 134 GIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIP-NGPSELAVK 192
Query: 600 ENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLE 421
E A LARYA+I Q +VPIVEPE+L DGEH +DR +V + V A + + +++V E
Sbjct: 193 EAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFE 252
Query: 420 GTLLKPNMVTAGQSCKKTYTPNDVARATVTALLRTVPAAVPGVTFLSGGQSEEEASVHLN 241
G LLKP+MVT G CK TP V+ T+ L R +P AVPG+ FLSGGQSE EA+ +LN
Sbjct: 253 GILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLN 312
Query: 240 AINAVDLKRPWVLTFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGQASLGKYVA 61
A+N PW ++FSY RALQ + L+ WGG+ EN+ A Q L+ RAKAN A LGKY +
Sbjct: 313 AMN--QGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTS 370
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 95.5 bits (227), Expect = 4e-20
Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Frame = -2
Query: 549 IVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQSCKK 370
+VPIVEPE+L DGEH ++R +V + V A + +++++V LEG LLKP+MVT G K
Sbjct: 263 LVPIVEPEILLDGEHRVERTFEVAQKVWADTFFHMSENNVMLEGILLKPSMVTPGAESKD 322
Query: 369 -TYTPNDVARATVTALLRTVPAAVPGVTFLSGGQSEEEASVHLNAIN-AVDLKRP--WVL 202
TP VA A+ R PA+ +LNA+N A P W +
Sbjct: 323 GAATPEQVAAAS----RRRCPASCSS----PAASRRWRRRGNLNAMNQAAPSANPWRWRV 374
Query: 201 TFSYGRALQASVLRAWGGKTENILAGQQELIKRAKANGQASLGK 70
+FSY RALQ + L+ WG + EN+ A Q EL A+ Q G+
Sbjct: 375 SFSYARALQNTCLKTWGSRRENVAAAQGELAGAARQVHQRRRGR 418
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGL 712
GI VDKG+VPL GS+ E GL
Sbjct: 241 GINVDKGLVPLAGSDPESLEDGL 263
>04_03_0368 + 15004949-15005659,15005789-15005848
Length = 256
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/60 (38%), Positives = 26/60 (43%)
Frame = +3
Query: 426 GTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGREHWRFPG 605
G RGG RP P+G G G AR R RQ+ G RWR + E WR G
Sbjct: 52 GKRGGAEPARAAAAARPPDPAGAG-GEAR---RRSGRQIRHGRGEARWRTTDLEPWRRGG 107
>10_08_0948 +
21754985-21755290,21756042-21756297,21756845-21756999,
21757077-21757349,21757582-21757776,21757867-21758058
Length = 458
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -2
Query: 636 IGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAV 457
IG+ S +AIQE R SI + +R ++E E + + + + ++ K + V +
Sbjct: 164 IGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHL 223
Query: 456 YKALNDHHV 430
K L DH V
Sbjct: 224 RKFLVDHSV 232
>06_03_0828 + 25137782-25138312,25141349-25141588
Length = 256
Score = 33.9 bits (74), Expect = 0.15
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Frame = +3
Query: 423 RGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGREHWRFP 602
R RG +A + ER + R R V R+ A S WRR+ W
Sbjct: 84 RRRRGRGAARRSHAEERRGGAASREIAMRRSGVAARS---AASTHSTPWRRTTGGRWARG 140
Query: 603 G*LGTRGCCGQSSARNATWRSGSRPSCTGRSAGR--GRPDPGW 725
G G R G +A A G R + +G GR GRPDP W
Sbjct: 141 G--GGRLEAGGGAAEEAG--GGERAAVSGEQRGRRRGRPDPIW 179
>12_02_0398 -
18586985-18587480,18587669-18587687,18588317-18588544,
18589699-18589966
Length = 336
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = +3
Query: 504 RARHQVRLRARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARNATWRSGSRPSC 683
R H+ R R + R G RR GR FP R G+ + +A G+ C
Sbjct: 31 RPVHRGRGRGGRRRRSGGDATGRRRGRVSGDFPA--KRRADRGRGGSCDAGRGGGAAGGC 88
Query: 684 TGRSAGRGRPDPG 722
TGR + RP PG
Sbjct: 89 TGRDSDFTRPPPG 101
>06_01_0022 - 218860-219053,219707-220010
Length = 165
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 420 PRGTRGGRSAPYTRRPERPQ-SPSGRGPGRARHQVR 524
P G RGG + Y RP P SPS P R Q+R
Sbjct: 7 PYGRRGGAAPSYVPRPRAPNPSPSAPAPARPPQQLR 42
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 780 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCH 664
G+ ++ V GS+ EC + LD+L YKK+GC+
Sbjct: 782 GVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCY 820
>06_02_0238 -
13357877-13357954,13358186-13358302,13358537-13358641,
13359301-13359393,13359801-13359888,13359979-13360028,
13361147-13361205,13361297-13361516,13361611-13361691,
13364034-13364111,13364203-13364298,13364370-13364435
Length = 376
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 342 ATVTALLRTVPAAVPGVTFLSGGQSEEEASVHLNAINAVDLKRPWVLTFSYGRALQASV 166
A VTALL +VP + P SGG+ + + LN + +D+ R ++L G ++ V
Sbjct: 131 AAVTALLCSVPISGPSDAASSGGKDKAKKPTRLNIV-GLDITRQFLLHIVSGTDVEKDV 188
>02_02_0628 +
12365109-12365150,12366315-12366411,12366489-12366554,
12367884-12367963,12368051-12368125,12368232-12368381,
12369816-12369881,12370141-12370206,12370653-12370763,
12370917-12371003,12371087-12371193,12372141-12372255,
12372472-12372537,12373521-12373615,12373700-12373880
Length = 467
Score = 31.5 bits (68), Expect = 0.78
Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 417 SPRGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQ-LAR-CVGSDRWR-RSGR 584
+P T G RS P T P S GRG G AR+Q+ RA + L+R GS R R R GR
Sbjct: 403 APTTTGGKRSQPATNG-NTPASKKGRGEGAARNQLVNRAFEGLSRGGRGSGRGRGRGGR 460
>02_02_0415 -
9981345-9981440,9981716-9981784,9982035-9982155,
9982441-9982622,9983320-9984921
Length = 689
Score = 31.5 bits (68), Expect = 0.78
Identities = 25/102 (24%), Positives = 36/102 (35%)
Frame = +3
Query: 423 RGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGREHWRFP 602
RG GG + P+ R +RP Q R L + RW R G R
Sbjct: 87 RGRHGGGARPWRRGEDRPARGGQHAADDGEVQGTRRGGDLKQRREGRRWTR-GETQARES 145
Query: 603 G*LGTRGCCGQSSARNATWRSGSRPSCTGRSAGRGRPDPGWC 728
G G G C + + R G + + G + + R + C
Sbjct: 146 GKAGNSGRCQSNGSGGNASRKGKKKAKGGENEVKLRVELDMC 187
>01_06_0352 +
28638453-28639391,28639486-28640034,28640388-28641195,
28641279-28641389,28641556-28641683
Length = 844
Score = 31.5 bits (68), Expect = 0.78
Identities = 33/113 (29%), Positives = 41/113 (36%)
Frame = +3
Query: 411 GVSPRGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGREH 590
G G G P R P +GRG G + RARQL G+ R +
Sbjct: 70 GEEGAGRGRGSGLPPIRAPRSLGVRAGRG-GAGPSRAAPRARQLN--FGAVGGRAGHGGN 126
Query: 591 WRFPG*LGTRGCCGQSSARNATWRSGSRPSCTGRSAGRGRPDPGWCIRLPIRT 749
+G G SS+ AT R R T R RGR GW + + T
Sbjct: 127 GGSSSGIGGGGPGRGSSSSGATGRRRQRAMATNRGRDRGRGGRGWRVPRSVGT 179
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 489 GRGPGRARHQVRLRARQLARCVGSDRWRRSGR--EHWRFPG*LGTR 620
G GPGR R+ R + ++R R GR WR P +GT+
Sbjct: 135 GGGPGRGSSSSGATGRRRQRAMATNRGRDRGRGGRGWRVPRSVGTQ 180
>07_01_1073 + 9566727-9566963,9566992-9567180
Length = 141
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 612 GTRGCCGQSSARNATWRSGSRPSCTGRSAGRGRPDPGWCIRLPIRTAGRHPCRP 773
GT CG S + TW GSR G+ R R P C + + AG C P
Sbjct: 78 GTSDGCGSGSGEDGTWSGGSRED--GQRRCRCRGSPPRCAPVEYQMAGCR-CAP 128
>08_01_0905 - 8928261-8928875
Length = 204
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Frame = +3
Query: 489 GRGPGRARHQVRLRARQLARCVGSDRWRRSG---REHWRFPG*LGTRGCCGQSSARNATW 659
G G R + R LA SD+W G R WR+ G++ + A+W
Sbjct: 86 GNGDRAGRRMMPAALRVLAMLRRSDQWIYDGGGVRYLWRYSVEQLAGVQLGEAKSGWASW 145
Query: 660 RSGSRPSCTGRSAGRGRPDPGWCIRLPIR 746
+ G++ GRGR G P R
Sbjct: 146 AAARVEKEEGKARGRGREKKGGTTSFPSR 174
>08_01_0477 - 4205562-4206464
Length = 300
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 630 GQSSARNATWRSGSRPSCTGRSAGRGRPDP-GWCIRLPIRTAGRHPCR 770
G SS T S S S + GRGRP P G + LP R R+P R
Sbjct: 3 GTSSVSARTASSLSSSSSSLDDGGRGRPPPAGSTLELPSRKHYRYPSR 50
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Frame = +3
Query: 426 GTRGGRSAPYTRRPE--------RPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSG 581
G G +AP RRP+ RP P GR GR+RH + + G DR RSG
Sbjct: 180 GDGDGEAAPLLRRPQLRSDYSTHRPP-PGGRSRGRSRHPRKAESTS-PSISGGDRGSRSG 237
Query: 582 REHWR 596
WR
Sbjct: 238 --PWR 240
>02_05_0285 -
27498946-27499122,27499944-27500108,27500828-27500960,
27501052-27501171,27502436-27502980
Length = 379
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/74 (36%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 459 RRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRW-RRSGREHWRFPG*LGTRGCCGQ 635
R P G G G RH LR L G+ R+ RRSGR R P L Q
Sbjct: 14 RLDSAPLLGGGGGGGGRRHGGALRRPSLR---GAARFLRRSGRRAMREPSLLVREAAADQ 70
Query: 636 SSARNATWRSGSRP 677
R A W + SRP
Sbjct: 71 LEERQADW-AYSRP 83
>09_02_0028 + 3109502-3110232,3110274-3110727
Length = 394
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 778 HQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDW 632
H G G R AV G + H G RPA+ VQ+G P R + W
Sbjct: 245 HHGVDGHRGAVSGGVVVLHRRLGGARPAVPRVQQGTKPSALGPQRQQQW 293
>08_01_0331 +
2966362-2966477,2966561-2966924,2966949-2967050,
2967127-2967209,2967306-2967422,2968085-2968187,
2968259-2968928,2969239-2969393,2969529-2969580,
2969734-2969825
Length = 617
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2
Query: 435 HVYLEGTLLKPNMVTAGQSCKKTYTPNDVARATVTALLRTVPA 307
+V E + LKP+MVT + ++++T N + T +LR++ A
Sbjct: 438 YVAEENSFLKPSMVTERSALQESFTTNKLQSFQETPVLRSMKA 480
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 716 PWVVHSSSDPNSGTTPLSTLMP 781
P+ HSSSDP S + PL +L+P
Sbjct: 67 PYSHHSSSDPMSASNPLVSLLP 88
>04_01_0363 + 4754650-4755912
Length = 420
Score = 29.5 bits (63), Expect = 3.1
Identities = 34/119 (28%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Frame = +3
Query: 402 WA*GVSPRGTRGGRSAPYTRRPE------RPQSPSG----RGPGRARHQVRLRARQLARC 551
W G PR RGGR R P+ R + +G G + R RAR+ +
Sbjct: 195 WRSGGEPRRRRGGRGGSRPREPDGSDGAVRRLAAAGVAGKAAAGGCTVRERWRARESSAK 254
Query: 552 VGSDR--WRRSGREHWRFPG*LGTRGCCGQSSARNATWRSGSRPSCTGRSAGRGRPDPG 722
G WRRS G G GQ R G R S GR G + G
Sbjct: 255 WGKRERGWRRSLNRERGGRTWPGEAGIAGQRGGSGRGERGGIRKSNPGRLRSAGERERG 313
>01_07_0274 + 42428947-42429108,42429405-42430178
Length = 311
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 107 LISSCCPARMFSVFPPQARSTE-AWRARP*LNVRTQGLLRSTALIAFRCTEASSSD*PPE 283
L+ C PA +PP A+ + R T G ++ L+A TEAS D PP
Sbjct: 19 LLLLCAPAASAGDYPPTAKGLSYGFYQRSCPKAETIGC-DASVLLARTATEASELDAPPN 77
Query: 284 RNVTP 298
+ P
Sbjct: 78 ETIRP 82
>08_02_0574 - 18867623-18868033,18869751-18870209
Length = 289
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 624 CCGQSSARNATWRSGSR--PSCTGRSAGRGRP 713
C G S+ +A + +R P+CTGRS+ G P
Sbjct: 90 CAGSSTTASAPTSTSTRAAPACTGRSSSTGLP 121
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -3
Query: 629 ATPPRTKLSRKTPMFSPATPPSVRANASCQLSSPKSYLMASTTWTAPRR*LRSFWPP 459
A P +++S T SP++ PS +++S S+P +A+ + +APRR PP
Sbjct: 96 AAAPSSRISAPT---SPSSAPSSPSSSSSSSSTPVRDAVAAESQSAPRRLAGGRAPP 149
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 28.7 bits (61), Expect = 5.5
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 480 SPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGREHWRFPG*LGTRGCCGQSSARN-AT 656
SP P RAR R R+ + GS R +RSG + WR G G R+ A
Sbjct: 379 SPFPLSPQRAR-----RRRRRSSGGGSVR-KRSGAQ-WRSGSARRRSGGGGSVRKRSCAQ 431
Query: 657 WRSGSRPSCTGRSAGRG 707
WRSGS S G +A RG
Sbjct: 432 WRSGSARSGGGGAARRG 448
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +3
Query: 423 RGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGREHWR 596
RG GGR + P R S S R G R + A R G++R R GR W+
Sbjct: 1383 RGQGGGREVWKSEGPHRGGSSSNRNQGGGRAVWKSEASH--RGSGNNRNRGGGRAVWK 1438
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 639 SARNATWRSGSRPSCTGRSAGRGRPDPGW 725
+A++A WR G RP+ T GR + + W
Sbjct: 27 TAKDARWRGGQRPAATPADEGRSQ-EAAW 54
>06_03_0139 + 17130980-17131594,17131740-17132009
Length = 294
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -1
Query: 223 PQEALGSDVQLRARPPGFGAPRLGREDREHSRRTAGADQAC*GQRSSFSREVRRWISHRL 44
P+ A S Q RARPP +P G E E+S++ ++ +SS ++ R IS RL
Sbjct: 161 PRSAAASGSQRRARPP--PSPLQGSELHEYSKKQRANNKE---TQSSAAKSRRERISERL 215
>04_04_0920 + 29429114-29430934
Length = 606
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 630 RNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEH 505
R TPS ++ LA + C P++EP+ LPD H
Sbjct: 18 RRTPSQTSLWTIRRQLASFVLHCSRSCASPLLEPKNLPDEFH 59
>03_02_0119 - 5725588-5726688,5726793-5726894
Length = 400
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 654 TWRSGSRPSCTGRSAGRGRPDPGWCIRL 737
T + ++P TG G GRP PG C+ L
Sbjct: 364 TTTTPAKPPLTGPRGGDGRPLPGGCLTL 391
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 620 PRTKLSRKTPMFSPATPPSVRANASCQLSSPKSYLMASTTWTAPRR 483
P L TP + P+TPPS + L+ P+ ++T T PRR
Sbjct: 177 PPFALQPPTPSWRPSTPPSAKT-----LTPPRRSPSPASTLTPPRR 217
>10_01_0098 - 1193184-1193703,1193814-1193872
Length = 192
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 645 RNATWRSGSRPSCTGRSAGRGRPDPG---WCIRLPIRTAGRHPCRP 773
R + + G P + R A R PDPG W P G HPCRP
Sbjct: 20 RKFSLKRGEIPP-SARPASRP-PDPGGESWAAWEPNALVGLHPCRP 63
>07_03_1293 -
25563431-25563545,25564078-25564196,25564300-25564467,
25564565-25564627,25564709-25564816,25565125-25565237,
25565313-25565609,25565724-25565802,25566116-25566224,
25566324-25566365,25567023-25567153,25568100-25568648
Length = 630
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 632 AATPPRTKLSRKTPMFSPATPPSVRANASCQLSSPKSYLMASTTWTAPRR*LRSFWPP 459
AATP +P F +TP A+ SSP+ S T RR LR +PP
Sbjct: 37 AATPAWKTKPWASPFFGFSTPSPSPAHHLFSASSPRRSPAPSAPTTPARRLLRLPFPP 94
>05_01_0006 -
44159-44206,44805-44850,45730-45818,46377-46394,
46490-46609,46702-46772,47038-47086,47567-47658,
47769-47811,47928-48049,48143-48426,48961-49148,
49220-49336,49516-49557,49991-50101,50530-50688,
50710-50769,50850-50927,51010-51103,51182-51483,
51659-51721,51808-51936
Length = 774
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 420 PRGTRGGRSAPYTRRPERPQSPSGRGPGRARHQ 518
PR G +SAP +R P +PS R RH+
Sbjct: 135 PRKLSGEQSAPESRVPSHLSTPSSRSLSPTRHR 167
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 714 DPGWCIRLPIRTAGRHPCRP*C 779
D W +P+R + +HPC P C
Sbjct: 748 DTAWVAMVPLRGSRQHPCFPQC 769
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 640 EDWPQHPLVPSYPGKRQCSRPLRLHLSEPTHRANCR 533
E +PQ P VPS P R LRL P ++ R
Sbjct: 10 EKYPQMPHVPSEPSNPTIGRSLRLRRISPPYQLIAR 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,537,990
Number of Sequences: 37544
Number of extensions: 553077
Number of successful extensions: 2624
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2612
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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