Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14b09
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   1.5  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    25   2.6  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.6  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   6.1  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.0  
AY146733-1|AAO12093.1|  131|Anopheles gambiae odorant-binding pr...    23   8.0  
AJ697724-1|CAG26917.1|  131|Anopheles gambiae putative odorant-b...    23   8.0  
AF203338-1|AAF19833.1|  113|Anopheles gambiae immune-responsive ...    23   8.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +2

Query: 53   TDPATYFPREA*PL-ALARLISSCCPARMFSVFPPQARSTEAWRARP*LNVRTQGLLRST 229
            ++PA   P  + P  ++AR+++S   + +FS    Q ++ +A  ++P     T  LLR  
Sbjct: 1310 SEPAPAAPSNSTPSRSVARIVTSFTDSPLFSRRNRQPKAPDADSSKPQSESNTPILLRWN 1369

Query: 230  ALIAFRCTEASSSD*P 277
            A    R ++A S D P
Sbjct: 1370 ANRHNRQSKADSLDSP 1385


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 56  DPATYFPREA*PLALARLISSCCPARMFSVFPPQARS 166
           D A++  R     +L R+++  C A M  VFP Q  S
Sbjct: 251 DVASFTERVTSAESLERVMTEACDAAMARVFPSQGHS 287


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 642 LKIGRNTPSYQAIQENANVLARYASICQSQRI 547
           L+ GRN P + +  ENA +   +     SQR+
Sbjct: 99  LRFGRNDPLWTSFNENALLEENFEKRAPSQRL 130


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 174 ASVLRAWGGKTENILAGQQELIKRAKA 94
           ASV  A GG+    L GQQ L+ R  A
Sbjct: 496 ASVGNATGGQLAGELPGQQRLLSRQPA 522


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 480 TEVVLAAVYKALNDHHVYLEGTLLKPNMV 394
           T+++L   Y  L   H YL+  +L P+M+
Sbjct: 328 TQMLLITDYHELGSLHDYLQKRVLNPHML 356


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 733 RMHHPGSGRPRPALRPVQEGRLPLRQVALR 644
           RM  PG   P P    V E    L++V +R
Sbjct: 328 RMSRPGEPYPHPCRPTVDEKNKQLQEVEMR 357


>AY146733-1|AAO12093.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP23 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 714 LDDLAQRCAQYKKDGCHFA 658
           +D++ ++C + K+D C  A
Sbjct: 99  IDEMLEKCGEQKEDACETA 117


>AJ697724-1|CAG26917.1|  131|Anopheles gambiae putative
           odorant-binding protein OBPjj14 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 714 LDDLAQRCAQYKKDGCHFA 658
           +D++ ++C + K+D C  A
Sbjct: 99  IDEMLEKCGEQKEDACETA 117


>AF203338-1|AAF19833.1|  113|Anopheles gambiae immune-responsive
           trypsin-like serineprotease-related protein ISPR10
           protein.
          Length = 113

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = -2

Query: 507 HDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQSC 376
           ++L  +Q +    +  ++ A +D      GT++KP+ V     C
Sbjct: 5   NNLCSSQNIRSSTVRLIWSAQDDQQQSCVGTVIKPDTVITSIRC 48


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 239 LSTLWTSRGPGF*RSATGAPSRLRCSAP 156
           L  +W S  PG   +  G  + L C AP
Sbjct: 67  LQRIWCSNTPGLVAAEIGGTTFLSCYAP 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,571
Number of Sequences: 2352
Number of extensions: 17527
Number of successful extensions: 53
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)