Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14b08
         (663 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p pro...    32   0.80 
AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-P...    32   0.80 

>BT021382-1|AAX33530.1| 1449|Drosophila melanogaster LD40485p
           protein.
          Length = 1449

 Score = 31.9 bits (69), Expect = 0.80
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = -2

Query: 449 TCKSRTRQLRYNSAIIAAMSQPGRTKKDCGLVYQQLSEDLTGPATPKLSRY----APLHS 282
           T ++ +   RYN     +  +PG   +   L+Y +L  +  G A PK  RY    A + +
Sbjct: 704 TLRNVSSTQRYNLKDTVSNYEPGYYGESMDLLYHRLDLNQGGSAPPKTCRYFRQVATMDA 763

Query: 281 VTVNASNMSYESS-PFHHNN 225
            T+  S  ++ES   F HNN
Sbjct: 764 PTLFLSAAAFESPFGFLHNN 783


>AE013599-2992|AAF57485.1| 1449|Drosophila melanogaster CG16868-PA
           protein.
          Length = 1449

 Score = 31.9 bits (69), Expect = 0.80
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = -2

Query: 449 TCKSRTRQLRYNSAIIAAMSQPGRTKKDCGLVYQQLSEDLTGPATPKLSRY----APLHS 282
           T ++ +   RYN     +  +PG   +   L+Y +L  +  G A PK  RY    A + +
Sbjct: 704 TLRNVSSTQRYNLKDTVSNYEPGYYGESMDLLYHRLDLNQGGSAPPKTCRYFRQVATMDA 763

Query: 281 VTVNASNMSYESS-PFHHNN 225
            T+  S  ++ES   F HNN
Sbjct: 764 PTLFLSAAAFESPFGFLHNN 783


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,573,983
Number of Sequences: 53049
Number of extensions: 560213
Number of successful extensions: 1526
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)