Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14b06
(787 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 33 0.013
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 30 0.071
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 28 0.38
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 27 0.87
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 26 1.1
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 26 1.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 26 1.1
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 25 3.5
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 4.6
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 24 4.6
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 4.6
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 24 6.1
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 8.1
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 32.7 bits (71), Expect = 0.013
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = -1
Query: 730 QQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVHNVQ-----PKSKSNLQKNIKDP 572
+ H+ +H PYKC C + F +HM HN PK+K+++ K P
Sbjct: 371 ESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRP 428
Score = 32.3 bits (70), Expect = 0.017
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 730 QQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVH 623
Q HVN H G P++C C F + +H+ H
Sbjct: 171 QNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRH 206
Score = 32.3 bits (70), Expect = 0.017
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 775 CTYXQKKHSSKDYDXQQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVHNVQPK 608
CTY S + +H+ IH G PY C +C F + SN K +H V K
Sbjct: 245 CTYA----SPDKFKLTRHMRIHTGEKPYSCDVCFARF-TQSNSLKAHKMIHQVGNK 295
Score = 29.1 bits (62), Expect = 0.16
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 739 YDXQQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVHNVQPKSK 602
Y + H H G Y+C CP A S + H+L +H Q K
Sbjct: 340 YSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLL-LHTDQKPYK 384
Score = 25.8 bits (54), Expect = 1.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 730 QQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVH 623
++H+ H G P++C C A +HM R+H
Sbjct: 228 KRHIRTHTGEKPFQCPHCTYASPDKFKLTRHM-RIH 262
Score = 23.8 bits (49), Expect = 6.1
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -1
Query: 736 DXQQHV-NIHIGLLPYKCSLCPKAFA---SYSNHYK 641
D + HV N+H P KC C F SY H K
Sbjct: 312 DLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAK 347
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 30.3 bits (65), Expect = 0.071
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 322 STFQTSMVPPEYG-PDFVNKAIESSAFSGDYIDLDDHLMPH 203
ST TS VP G D++N ++S FSG + L H PH
Sbjct: 440 STTPTS-VPSSNGYGDYMNNCLQSGYFSGGFSSLHSHHSPH 479
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 27.9 bits (59), Expect = 0.38
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = -1
Query: 757 KHSSKDYDXQQHVNIHIGLLPYKCSLCPKAFASYSNHYKHMLRVH 623
++ +Y+ + N + G+ KC++C K F+ ++ HM +H
Sbjct: 363 QYQKHEYEVHRISNENFGI---KCTICHKLFSQRQDYQLHMRAIH 404
Score = 24.6 bits (51), Expect = 3.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = -1
Query: 694 YKCSLCPKAFASYSNHYKHMLRVHNV 617
++C+LC ++ + + KH VH +
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRI 374
Score = 23.4 bits (48), Expect = 8.1
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -1
Query: 694 YKCSLCPKAFASYSNHYKH 638
Y+C C F +N Y H
Sbjct: 292 YRCPACGNLFVELTNFYNH 310
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 26.6 bits (56), Expect = 0.87
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 472 YYHPYPLWFALTAFDQLQIVFLHSYLCHGILSWMDL*YFFVDSI 603
YY P F +T FD + L + C + W D+ Y+ D++
Sbjct: 309 YYWEGPN-FGITNFDNFGLSMLTVFQCVTLEGWTDMLYYIEDAM 351
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/63 (19%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 667 FASYSNHYKHMLRVHNVQPKSKSNLQKNIKDP---SKKECHDKDTNEEKQSVVDQKPLEQ 497
F Y NH ++ ++++ K + + + + P + C+D D E+ + + PL++
Sbjct: 130 FEQYRNHLHNIHQLYSDMLKDLARTEFDRRPPHWRTSNPCYDDDDEEDAAAAAAEFPLQK 189
Query: 496 TIM 488
++
Sbjct: 190 DVI 192
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 26.2 bits (55), Expect = 1.1
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 427 MFN-ETNNGDTVD--GPQLADIQPDNSAVAVFDFQSNNST 317
+FN +TNN ++ P +Q ++SAV +F+FQ N T
Sbjct: 1131 VFNTDTNNATELNIRYPAFMAVQANDSAVQLFNFQRNKLT 1170
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 26.2 bits (55), Expect = 1.1
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 427 MFN-ETNNGDTVD--GPQLADIQPDNSAVAVFDFQSNNST 317
+FN +TNN ++ P +Q ++SAV +F+FQ N T
Sbjct: 1132 VFNTDTNNATELNIRYPAFMAVQANDSAVQLFNFQRNKLT 1171
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 24.6 bits (51), Expect = 3.5
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = -1
Query: 535 EKQSVVDQKPLEQTIMDTDDSTVESIDPIALEKELQMFNETNNGDTVDGPQLADIQPDNS 356
E+ V+ + +E+ + D+ S+DP+ +E+E+ E +NG D L +++
Sbjct: 70 EQNYAVEVRDIERNDYNFDEPKT-SLDPVVVEEEI---IEESNGPDGDNLVLEQGSNNSN 125
Query: 355 AVAVFDFQ 332
+ + DF+
Sbjct: 126 SKDIVDFE 133
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 24.2 bits (50), Expect = 4.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 589 KNIKDPSKKECHDKDTNEEKQSVVDQKPLEQTIMDT 482
+NI P+ C+ E ++Q LEQT++ +
Sbjct: 103 RNIPFPAVTICNMNQLRREAAERIEQNTLEQTVLQS 138
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 24.2 bits (50), Expect = 4.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 589 KNIKDPSKKECHDKDTNEEKQSVVDQKPLEQTIMDT 482
+NI P+ C+ E ++Q LEQT++ +
Sbjct: 103 RNIPFPAVTICNMNQLRREAAERIEQNTLEQTVLQS 138
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.2 bits (50), Expect = 4.6
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 28 QYFGAHQTYCISICQCS*WKAC 93
Q+ + T+C ++C C + AC
Sbjct: 731 QFLCKYDTHCFALCHCCDFYAC 752
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 23.8 bits (49), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 344 DSYSTIVGLDVGKLGSINSVPVVGLIEHLQFLLKSDGINTLY 469
D T +G DVG+ GL++ L+ +KSDGI LY
Sbjct: 137 DFARTRLGADVGR--GAGEREFNGLLDCLKKTVKSDGIIGLY 176
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.4 bits (48), Expect = 8.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1
Query: 40 AHQTYCISICQCS*WKAC 93
++ T+C ++C C + AC
Sbjct: 771 SYNTHCFALCHCCEFDAC 788
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,603
Number of Sequences: 2352
Number of extensions: 19009
Number of successful extensions: 270
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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