BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14b03
(797 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 96 4e-22
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 85 1e-18
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 66 5e-13
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 60 2e-11
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 55 9e-10
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 55 9e-10
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 53 3e-09
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 5.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 7.6
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 7.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.6
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 95.9 bits (228), Expect = 4e-22
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Frame = -3
Query: 738 RQMASGLQYLHSKNIAHRDLKCENILLSRRFN---VKLADFGFARFCTDGENRRVLSQTY 568
+Q+ + + H + HRDLK EN+LL+ + VKLADFG A GE + +
Sbjct: 16 QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA-IEVQGEAQAWFG--F 72
Query: 567 CGSAAYAAPEVVSGTPYNPKLADVWSLGIILFIMLNGSMPFDDTNLRKLLKDQMSRNWVF 388
G+ Y +PEV+ PY K D+W+ G+IL+I+L G PF D + +L + ++ +
Sbjct: 73 AGTPGYLSPEVLKKEPYG-KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDY 131
Query: 387 RSRIRDSVSPAAKSIVRHILEPDITLRLTLDRVLSHEWTRPRKDKSASLMGR 232
S D+V+P AK+++ +L + + R+T L H W R ++ AS++ R
Sbjct: 132 PSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQR-ERVASVVHR 182
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 84.6 bits (200), Expect = 1e-18
Identities = 43/114 (37%), Positives = 65/114 (57%)
Frame = -3
Query: 786 IKRNGVVPENQXKLWFRQMASGLQYLHSKNIAHRDLKCENILLSRRFNVKLADFGFARFC 607
++ G + + + + YLHS+NI +RDLK EN+LL + VKL DFGFA+
Sbjct: 457 LRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRL 516
Query: 606 TDGENRRVLSQTYCGSAAYAAPEVVSGTPYNPKLADVWSLGIILFIMLNGSMPF 445
G + T+CG+ Y APEV+ ++ AD WSLG+++F +L G+ PF
Sbjct: 517 DHGRK----TWTFCGTPEYVAPEVILNKGHDIS-ADYWSLGVLMFELLTGTPPF 565
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 65.7 bits (153), Expect = 5e-13
Identities = 43/163 (26%), Positives = 77/163 (47%)
Frame = -3
Query: 771 VVPENQXKLWFRQMASGLQYLHSKNIAHRDLKCENILLSRRFNVKLADFGFARFCTDGEN 592
++ +N+ + + LQ+ H+ I H D+K +NIL+S+ KL DFG + G
Sbjct: 151 ILIKNERICILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLI--GAP 208
Query: 591 RRVLSQTYCGSAAYAAPEVVSGTPYNPKLADVWSLGIILFIMLNGSMPFDDTNLRKLLKD 412
+ + G+ Y APEV+ P AD++SLGI+ + ML +PF + ++
Sbjct: 209 NEI--DKFYGTPGYTAPEVIKQNRPTP-AADIYSLGIVAWQMLFRKLPFAGLHSHTIIYL 265
Query: 411 QMSRNWVFRSRIRDSVSPAAKSIVRHILEPDITLRLTLDRVLS 283
+ I D K++ + + +IT R T + V++
Sbjct: 266 SAKGHRPIDDNIDDEFKGTYKTLYKQMWSQNITERPTTNEVIT 308
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 60.1 bits (139), Expect = 2e-11
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = -3
Query: 738 RQMASGLQYLHSKNIAHRDLKCENILLSRRFNVKLADFGFARFCTDGENRRVLSQTYCGS 559
R +ASG+QYL N HRDL N+L++ K+ADFG +R ++
Sbjct: 742 RGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIP 801
Query: 558 AAYAAPEVVSGTPYNPKLADVWSLGIILF-IMLNGSMPFDDTNLRKLLK 415
+ APE ++ + +DVWS+GI+ + +M G P+ + + + ++K
Sbjct: 802 VRWTAPEAIAFRKFT-SASDVWSMGIVCWEVMSYGERPYWNWSNQDVIK 849
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 54.8 bits (126), Expect = 9e-10
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = -3
Query: 723 GLQYLHSKNIAHRDLKCENILLSRRFNVKLADFGFARFCTDGENRRVLSQTYCGSAAYAA 544
G++YLHS+ + HRD+K +N+LL KL DFG FC ++ + G+ + A
Sbjct: 709 GIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG---FCI---TEVMMLGSIVGTPVHMA 762
Query: 543 PEVVSGTPYNPKLADVWSLGIILFIMLNG 457
PE++SG + DV++ GI+ + + G
Sbjct: 763 PELLSG--HYDSSVDVYAFGILFWYLCAG 789
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 54.8 bits (126), Expect = 9e-10
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = -3
Query: 723 GLQYLHSKNIAHRDLKCENILLSRRFNVKLADFGFARFCTDGENRRVLSQTYCGSAAYAA 544
G++YLHS+ + HRD+K +N+LL KL DFG FC ++ + G+ + A
Sbjct: 747 GIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFG---FCI---TEVMMLGSIVGTPVHMA 800
Query: 543 PEVVSGTPYNPKLADVWSLGIILFIMLNG 457
PE++SG + DV++ GI+ + + G
Sbjct: 801 PELLSG--HYDSSVDVYAFGILFWYLCAG 827
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 53.2 bits (122), Expect = 3e-09
Identities = 26/76 (34%), Positives = 46/76 (60%)
Frame = -3
Query: 786 IKRNGVVPENQXKLWFRQMASGLQYLHSKNIAHRDLKCENILLSRRFNVKLADFGFARFC 607
I++ G E + ++A GL +LH + I +RDLK +N+LL + ++K+ADFG C
Sbjct: 76 IQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFG---MC 132
Query: 606 TDGENRRVLSQTYCGS 559
+G + ++T+CG+
Sbjct: 133 KEGISGDKTTKTFCGT 148
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 277 FMGEYTVKCQSQCNIGFEDMTNDRLGCW 360
F + TVK S+ + + N+ L CW
Sbjct: 301 FDSQLTVKAVSKNGVLLFGLANNTLSCW 328
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -1
Query: 92 LAIKSGQVYNHFFIW 48
L++K+ + YN+++IW
Sbjct: 134 LSLKNIEPYNNYYIW 148
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 426 KLLKDQMSRNWVFRSRIRDSVS 361
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.6
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -1
Query: 92 LAIKSGQVYNHFFIW 48
L++K+ + YN+++IW
Sbjct: 134 LSLKNIEPYNNYYIW 148
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,842
Number of Sequences: 438
Number of extensions: 4759
Number of successful extensions: 49
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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