Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14a24
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        26   1.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   4.0  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   5.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   7.0  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   9.3  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 426 QEKLCNLQVSYAKYWDSSWTGLEVGHRGLGASFKTKEGN 310
           + K C +Q  Y  + D +W    +   G GA F   E N
Sbjct: 336 RHKSCQIQTLYVSFRDLNWQDWIIAPDGFGAFFCFGECN 374


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 354  PLLTLSNLSPNTWH 395
            P L  S+LSPN WH
Sbjct: 1010 PSLNESSLSPNLWH 1023


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -2

Query: 462 TVNFGYLTVCPIQEKLCNLQVSYAKYWDSSW 370
           +VN G+  V  +  K+C +++S+ K W + +
Sbjct: 404 SVNHGFEAVYELT-KMCTIRMSFVKGWGAEY 433


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 354  PLLTLSNLSPNTWH 395
            P L  S+LSPN WH
Sbjct: 1008 PGLNESSLSPNLWH 1021


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 594 YMNKSLLXKPAAWDLVW 644
           Y NK++L   A W+ +W
Sbjct: 71  YANKAVLLSSAKWEQMW 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,726
Number of Sequences: 2352
Number of extensions: 13673
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)