Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14a24
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069505-1|AAL39650.1|  707|Drosophila melanogaster LD22655p pro...   239   2e-63
AE014134-664|AAN10382.1|  521|Drosophila melanogaster CG2818-PB,...   239   2e-63
AE014134-663|AAF51071.3|  707|Drosophila melanogaster CG2818-PA,...   239   2e-63
AY070640-1|AAL48111.1|  679|Drosophila melanogaster RH02475p pro...   134   1e-31
AE013599-3132|AAF46674.1|  679|Drosophila melanogaster CG9394-PA...   134   1e-31
AY089260-1|AAL89998.1|  739|Drosophila melanogaster AT04656p pro...   132   6e-31
AE014297-1471|AAF54771.1|  739|Drosophila melanogaster CG3942-PA...   132   6e-31
AE014296-3091|AAF49203.1|  699|Drosophila melanogaster CG11619-P...   104   1e-22
AY061498-1|AAL29046.1|  636|Drosophila melanogaster LD45843p pro...    99   7e-21
AE014296-3095|AAO41238.1|  770|Drosophila melanogaster CG18135-P...    99   7e-21
AE014296-3094|AAO41237.1|  711|Drosophila melanogaster CG18135-P...    99   7e-21
AE014296-3093|AAF49202.2|  653|Drosophila melanogaster CG18135-P...    99   7e-21
AE014296-3092|AAO41236.1|  636|Drosophila melanogaster CG18135-P...    99   7e-21

>AY069505-1|AAL39650.1|  707|Drosophila melanogaster LD22655p
           protein.
          Length = 707

 Score =  239 bits (586), Expect = 2e-63
 Identities = 115/207 (55%), Positives = 149/207 (71%), Gaps = 2/207 (0%)
 Frame = -2

Query: 699 RNQFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASED-PPCHVGYTYVLPNMFK 523
           + QFG      D+ + ++T  + +  AY ID YSYSSR A ED PP H+GY YVLPN+FK
Sbjct: 257 QEQFGTGCGPTDLVIFHLTVGDFENTAYLIDLYSYSSRVAKEDGPPNHLGYHYVLPNLFK 316

Query: 522 PSEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQE-KLCNLQVSYAKYWDSSWTGLEVGHR 346
            SEGNLELP+TC   HRPLG +  GYL V P     L ++ VSYA+YW+S WTGL+VGHR
Sbjct: 317 RSEGNLELPITCAKGHRPLGMMRLGYLIVKPSSLCALMDMSVSYARYWNSKWTGLDVGHR 376

Query: 345 GLGASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRK 166
           G G SFK K+   IRENTI SLK AA  GAD++EFDVQLSKD++PV+YHDF + +S+K K
Sbjct: 377 GSGTSFKAKDA-VIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSK 435

Query: 165 KEIEFTEMLELPVKDLTLEHLQKLKVH 85
             ++  + L LP+++L+LE L+KLKV+
Sbjct: 436 CSLQEHDFLALPMRELSLEQLKKLKVY 462


>AE014134-664|AAN10382.1|  521|Drosophila melanogaster CG2818-PB,
           isoform B protein.
          Length = 521

 Score =  239 bits (586), Expect = 2e-63
 Identities = 115/207 (55%), Positives = 149/207 (71%), Gaps = 2/207 (0%)
 Frame = -2

Query: 699 RNQFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASED-PPCHVGYTYVLPNMFK 523
           + QFG      D+ + ++T  + +  AY ID YSYSSR A ED PP H+GY YVLPN+FK
Sbjct: 71  QEQFGTGCGPTDLVIFHLTVGDFENTAYLIDLYSYSSRVAKEDGPPNHLGYHYVLPNLFK 130

Query: 522 PSEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQE-KLCNLQVSYAKYWDSSWTGLEVGHR 346
            SEGNLELP+TC   HRPLG +  GYL V P     L ++ VSYA+YW+S WTGL+VGHR
Sbjct: 131 RSEGNLELPITCAKGHRPLGMMRLGYLIVKPSSLCALMDMSVSYARYWNSKWTGLDVGHR 190

Query: 345 GLGASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRK 166
           G G SFK K+   IRENTI SLK AA  GAD++EFDVQLSKD++PV+YHDF + +S+K K
Sbjct: 191 GSGTSFKAKDA-VIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSK 249

Query: 165 KEIEFTEMLELPVKDLTLEHLQKLKVH 85
             ++  + L LP+++L+LE L+KLKV+
Sbjct: 250 CSLQEHDFLALPMRELSLEQLKKLKVY 276


>AE014134-663|AAF51071.3|  707|Drosophila melanogaster CG2818-PA,
           isoform A protein.
          Length = 707

 Score =  239 bits (586), Expect = 2e-63
 Identities = 115/207 (55%), Positives = 149/207 (71%), Gaps = 2/207 (0%)
 Frame = -2

Query: 699 RNQFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASED-PPCHVGYTYVLPNMFK 523
           + QFG      D+ + ++T  + +  AY ID YSYSSR A ED PP H+GY YVLPN+FK
Sbjct: 257 QEQFGTGCGPTDLVIFHLTVGDFENTAYLIDLYSYSSRVAKEDGPPNHLGYHYVLPNLFK 316

Query: 522 PSEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQE-KLCNLQVSYAKYWDSSWTGLEVGHR 346
            SEGNLELP+TC   HRPLG +  GYL V P     L ++ VSYA+YW+S WTGL+VGHR
Sbjct: 317 RSEGNLELPITCAKGHRPLGMMRLGYLIVKPSSLCALMDMSVSYARYWNSKWTGLDVGHR 376

Query: 345 GLGASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRK 166
           G G SFK K+   IRENTI SLK AA  GAD++EFDVQLSKD++PV+YHDF + +S+K K
Sbjct: 377 GSGTSFKAKDA-VIRENTITSLKNAAEHGADMVEFDVQLSKDLVPVVYHDFMIYVSLKSK 435

Query: 165 KEIEFTEMLELPVKDLTLEHLQKLKVH 85
             ++  + L LP+++L+LE L+KLKV+
Sbjct: 436 CSLQEHDFLALPMRELSLEQLKKLKVY 462


>AY070640-1|AAL48111.1|  679|Drosophila melanogaster RH02475p
           protein.
          Length = 679

 Score =  134 bits (323), Expect = 1e-31
 Identities = 65/204 (31%), Positives = 119/204 (58%), Gaps = 1/204 (0%)
 Frame = -2

Query: 693 QFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPSE 514
           ++G      D+ + +V      ++AY ++ Y+       ED    +GY+++L   F  +E
Sbjct: 238 EYGVPYATGDILMFHVNLEQLDRVAYLVEVYA---EQPDEDLVRLLGYSHLLHTSFSGTE 294

Query: 513 GNLELPVTCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGLGA 334
           G++ + +   +  R +G +   YL + P+++   +L+ S+A YW S+WT LE+GHRGLG 
Sbjct: 295 GDVSIDLISPLWQRVVGQLRIEYLHIRPMEKDGFDLRTSFANYWRSNWTALEIGHRGLGK 354

Query: 333 SFK-TKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEI 157
           S   T     + ENT+A++  ++  GADL+EFDVQL+ D++P+I+HDF + + +  K   
Sbjct: 355 SLTVTTNAAPLIENTVATMLASSELGADLVEFDVQLTSDLVPIIHHDFSIRVCIDSKTPT 414

Query: 156 EFTEMLELPVKDLTLEHLQKLKVH 85
              ++ E+ +KD++ E L+ LK +
Sbjct: 415 SKDDLTEVLLKDISYEQLKDLKTY 438


>AE013599-3132|AAF46674.1|  679|Drosophila melanogaster CG9394-PA
           protein.
          Length = 679

 Score =  134 bits (323), Expect = 1e-31
 Identities = 65/204 (31%), Positives = 119/204 (58%), Gaps = 1/204 (0%)
 Frame = -2

Query: 693 QFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPSE 514
           ++G      D+ + +V      ++AY ++ Y+       ED    +GY+++L   F  +E
Sbjct: 238 EYGVPYATGDILMFHVNLEQLDRVAYLVEVYA---EQPDEDLVRLLGYSHLLHTSFSGTE 294

Query: 513 GNLELPVTCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGLGA 334
           G++ + +   +  R +G +   YL + P+++   +L+ S+A YW S+WT LE+GHRGLG 
Sbjct: 295 GDVSIDLISPLWQRVVGQLRIEYLHIRPMEKDGFDLRTSFANYWRSNWTALEIGHRGLGK 354

Query: 333 SFK-TKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEI 157
           S   T     + ENT+A++  ++  GADL+EFDVQL+ D++P+I+HDF + + +  K   
Sbjct: 355 SLTVTTNAAPLIENTVATMLASSELGADLVEFDVQLTSDLVPIIHHDFSIRVCIDSKTPT 414

Query: 156 EFTEMLELPVKDLTLEHLQKLKVH 85
              ++ E+ +KD++ E L+ LK +
Sbjct: 415 SKDDLTEVLLKDISYEQLKDLKTY 438


>AY089260-1|AAL89998.1|  739|Drosophila melanogaster AT04656p
           protein.
          Length = 739

 Score =  132 bits (318), Expect = 6e-31
 Identities = 58/182 (31%), Positives = 104/182 (57%)
 Frame = -2

Query: 699 RNQFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKP 520
           + +FG      D+ L + +   P++  Y +D Y+Y+ +A  ++PP H GY +++P+    
Sbjct: 256 QQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPPYHYGYGFLMPDQLLG 315

Query: 519 SEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           +EG+  + +TC   HRPL  +   YL + P+    C+L  SY +YW  +   + +GH+G 
Sbjct: 316 TEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFRCDLSHSYERYWRKNRLCMNIGHKGS 375

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G +++    + +RENT+   K+A  + AD++E DVQL++D   V+YHDF +   ++R   
Sbjct: 376 GNTYRL-GSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPS 434

Query: 159 IE 154
            E
Sbjct: 435 FE 436


>AE014297-1471|AAF54771.1|  739|Drosophila melanogaster CG3942-PA
           protein.
          Length = 739

 Score =  132 bits (318), Expect = 6e-31
 Identities = 58/182 (31%), Positives = 104/182 (57%)
 Frame = -2

Query: 699 RNQFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKP 520
           + +FG      D+ L + +   P++  Y +D Y+Y+ +A  ++PP H GY +++P+    
Sbjct: 256 QQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPPYHYGYGFLMPDQLLG 315

Query: 519 SEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           +EG+  + +TC   HRPL  +   YL + P+    C+L  SY +YW  +   + +GH+G 
Sbjct: 316 TEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFRCDLSHSYERYWRKNRLCMNIGHKGS 375

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G +++    + +RENT+   K+A  + AD++E DVQL++D   V+YHDF +   ++R   
Sbjct: 376 GNTYRL-GSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPS 434

Query: 159 IE 154
            E
Sbjct: 435 FE 436


>AE014296-3091|AAF49203.1|  699|Drosophila melanogaster CG11619-PA
           protein.
          Length = 699

 Score =  104 bits (249), Expect = 1e-22
 Identities = 53/166 (31%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
 Frame = -2

Query: 582 ASEDPPCHVGYTYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLTVCPIQE-KLCNL 406
           AS D    +G  Y+ P+  K S G L+LP+  ++++  +G +   YL V P+ + +  NL
Sbjct: 287 ASRDLQLSLGEAYIFPDQIKGSRGILQLPIFASLQNLAIGEITLPYLVVQPMPKVEAGNL 346

Query: 405 QVSYAKYWDSSWTGLEVGHRGLGASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLS 226
           + S+  YW  +W  L+VG+RGLGAS+  +   ++ ENTI S      +  D+++ DVQL+
Sbjct: 347 RASFHHYWPDNWPTLDVGYRGLGASY-FQSSTSLTENTIESYLAVLKAKGDMVQLDVQLT 405

Query: 225 KDMIPVIYHDFYVCISMKRKKEIEFTEMLELPVKDLTLEHLQKLKV 88
           KD +PV++H F    S   +   +  ++  + +++LT   L+  +V
Sbjct: 406 KDYVPVVWHGFGFYTSDTDRSVRDRFDLRFVLIRELTYSELKASRV 451


>AY061498-1|AAL29046.1|  636|Drosophila melanogaster LD45843p
           protein.
          Length = 636

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
 Frame = -2

Query: 690 FGREXKLNDVXLVNVTTPNPKQLA--YXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPS 517
           FG      D+ + ++T P  + +   + ++ YS S+          +G   ++ +    S
Sbjct: 216 FGVPYTKGDIVIFHITLPLERMMEQHFRLECYSMSNEL--------LGSATLVTSDLTGS 267

Query: 516 EGNLELPV-TCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           EG L LP+ +       L  +   Y+ V P +    + + +YA YW  SW  L+VGHRG 
Sbjct: 268 EGVLHLPIKSAKNADETLARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGN 327

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G S+   +  A RENTIAS   A    AD++E DV L+ D +PVIYHDF +  +    K+
Sbjct: 328 GKSY-IADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGL-RTAPPGKQ 385

Query: 159 IEFTEMLE-LPVKDLTLEHLQKLKVHS 82
           I   + LE + +KD+  E L++L++ S
Sbjct: 386 ISRPDQLEYVLIKDINYELLKRLRIFS 412


>AE014296-3095|AAO41238.1|  770|Drosophila melanogaster CG18135-PD,
           isoform D protein.
          Length = 770

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
 Frame = -2

Query: 690 FGREXKLNDVXLVNVTTPNPKQLA--YXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPS 517
           FG      D+ + ++T P  + +   + ++ YS S+          +G   ++ +    S
Sbjct: 350 FGVPYTKGDIVIFHITLPLERMMEQHFRLECYSMSNEL--------LGSATLVTSDLTGS 401

Query: 516 EGNLELPV-TCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           EG L LP+ +       L  +   Y+ V P +    + + +YA YW  SW  L+VGHRG 
Sbjct: 402 EGVLHLPIKSAKNADETLARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGN 461

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G S+   +  A RENTIAS   A    AD++E DV L+ D +PVIYHDF +  +    K+
Sbjct: 462 GKSY-IADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGL-RTAPPGKQ 519

Query: 159 IEFTEMLE-LPVKDLTLEHLQKLKVHS 82
           I   + LE + +KD+  E L++L++ S
Sbjct: 520 ISRPDQLEYVLIKDINYELLKRLRIFS 546


>AE014296-3094|AAO41237.1|  711|Drosophila melanogaster CG18135-PC,
           isoform C protein.
          Length = 711

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
 Frame = -2

Query: 690 FGREXKLNDVXLVNVTTPNPKQLA--YXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPS 517
           FG      D+ + ++T P  + +   + ++ YS S+          +G   ++ +    S
Sbjct: 291 FGVPYTKGDIVIFHITLPLERMMEQHFRLECYSMSNEL--------LGSATLVTSDLTGS 342

Query: 516 EGNLELPV-TCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           EG L LP+ +       L  +   Y+ V P +    + + +YA YW  SW  L+VGHRG 
Sbjct: 343 EGVLHLPIKSAKNADETLARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGN 402

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G S+   +  A RENTIAS   A    AD++E DV L+ D +PVIYHDF +  +    K+
Sbjct: 403 GKSY-IADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGL-RTAPPGKQ 460

Query: 159 IEFTEMLE-LPVKDLTLEHLQKLKVHS 82
           I   + LE + +KD+  E L++L++ S
Sbjct: 461 ISRPDQLEYVLIKDINYELLKRLRIFS 487


>AE014296-3093|AAF49202.2|  653|Drosophila melanogaster CG18135-PA,
           isoform A protein.
          Length = 653

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
 Frame = -2

Query: 690 FGREXKLNDVXLVNVTTPNPKQLA--YXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPS 517
           FG      D+ + ++T P  + +   + ++ YS S+          +G   ++ +    S
Sbjct: 233 FGVPYTKGDIVIFHITLPLERMMEQHFRLECYSMSNEL--------LGSATLVTSDLTGS 284

Query: 516 EGNLELPV-TCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           EG L LP+ +       L  +   Y+ V P +    + + +YA YW  SW  L+VGHRG 
Sbjct: 285 EGVLHLPIKSAKNADETLARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGN 344

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G S+   +  A RENTIAS   A    AD++E DV L+ D +PVIYHDF +  +    K+
Sbjct: 345 GKSY-IADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGL-RTAPPGKQ 402

Query: 159 IEFTEMLE-LPVKDLTLEHLQKLKVHS 82
           I   + LE + +KD+  E L++L++ S
Sbjct: 403 ISRPDQLEYVLIKDINYELLKRLRIFS 429


>AE014296-3092|AAO41236.1|  636|Drosophila melanogaster CG18135-PB,
           isoform B protein.
          Length = 636

 Score = 98.7 bits (235), Expect = 7e-21
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
 Frame = -2

Query: 690 FGREXKLNDVXLVNVTTPNPKQLA--YXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPS 517
           FG      D+ + ++T P  + +   + ++ YS S+          +G   ++ +    S
Sbjct: 216 FGVPYTKGDIVIFHITLPLERMMEQHFRLECYSMSNEL--------LGSATLVTSDLTGS 267

Query: 516 EGNLELPV-TCNVKHRPLGTVNFGYLTVCPIQEKLCNLQVSYAKYWDSSWTGLEVGHRGL 340
           EG L LP+ +       L  +   Y+ V P +    + + +YA YW  SW  L+VGHRG 
Sbjct: 268 EGVLHLPIKSAKNADETLARLRLPYVAVQPYRYSPLDFKNTYAHYWPKSWPNLDVGHRGN 327

Query: 339 GASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
           G S+   +  A RENTIAS   A    AD++E DV L+ D +PVIYHDF +  +    K+
Sbjct: 328 GKSY-IADAPAERENTIASFLSAHEHHADMIELDVHLTADGVPVIYHDFGL-RTAPPGKQ 385

Query: 159 IEFTEMLE-LPVKDLTLEHLQKLKVHS 82
           I   + LE + +KD+  E L++L++ S
Sbjct: 386 ISRPDQLEYVLIKDINYELLKRLRIFS 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,551,864
Number of Sequences: 53049
Number of extensions: 608594
Number of successful extensions: 1292
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)