Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a24
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical p... 103 2e-22
Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical p... 103 2e-22
Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical pr... 103 2e-22
Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical pr... 97 8e-21
Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical ... 47 1e-05
U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z81127-1|CAB03386.1| 325|Caenorhabditis elegans Hypothetical pr... 36 0.037
U00064-3|AAB52706.2| 375|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z47070-2|CAA87343.2| 340|Caenorhabditis elegans Hypothetical pr... 31 0.60
U15129-1|AAB60240.1| 225|Caenorhabditis elegans protein-L-isoas... 31 0.80
U09669-1|AAA82166.1| 225|Caenorhabditis elegans protein-L-isoas... 31 0.80
AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein carbo... 31 0.80
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 29 3.2
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 28 7.4
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 28 7.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 103 bits (246), Expect = 2e-22
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 16/188 (8%)
Frame = -2
Query: 609 DFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLTVCP 430
+F ++ SE+ +G Y LP+ + + G + LP N RP+G V+ YL V
Sbjct: 244 EFLAFYIEIFSEERK-RIGACYALPSSLQDASGIIHLPFI-NSSGRPIGQVSIEYLCVRA 301
Query: 429 IQEKLCNLQV---SYAKYWDSSWTGLEVGHRGLGASFKTKEGNAIRENTIASLKKAAASG 259
+ +L Q +Y ++W LEVGHRG G S+ TK A RENTI SL AA +G
Sbjct: 302 LT-RLDGPQFMDQTYCRHWKKR-NALEVGHRGAGNSY-TKFAMA-RENTIHSLNTAAKNG 357
Query: 258 ADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEIEF-----TEML--------ELPVKDL 118
AD +EFDVQL+KD I VIYHDF+V +S+ R+ + E L ELPVKDL
Sbjct: 358 ADYVEFDVQLTKDRIAVIYHDFHVLVSVARRDGLAMPPPMTREQLDSSNLDYHELPVKDL 417
Query: 117 TLEHLQKL 94
L L+ L
Sbjct: 418 KLSQLKLL 425
>Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 103 bits (246), Expect = 2e-22
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 16/188 (8%)
Frame = -2
Query: 609 DFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLTVCP 430
+F ++ SE+ +G Y LP+ + + G + LP N RP+G V+ YL V
Sbjct: 321 EFLAFYIEIFSEERK-RIGACYALPSSLQDASGIIHLPFI-NSSGRPIGQVSIEYLCVRA 378
Query: 429 IQEKLCNLQV---SYAKYWDSSWTGLEVGHRGLGASFKTKEGNAIRENTIASLKKAAASG 259
+ +L Q +Y ++W LEVGHRG G S+ TK A RENTI SL AA +G
Sbjct: 379 LT-RLDGPQFMDQTYCRHWKKR-NALEVGHRGAGNSY-TKFAMA-RENTIHSLNTAAKNG 434
Query: 258 ADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEIEF-----TEML--------ELPVKDL 118
AD +EFDVQL+KD I VIYHDF+V +S+ R+ + E L ELPVKDL
Sbjct: 435 ADYVEFDVQLTKDRIAVIYHDFHVLVSVARRDGLAMPPPMTREQLDSSNLDYHELPVKDL 494
Query: 117 TLEHLQKL 94
L L+ L
Sbjct: 495 KLSQLKLL 502
>Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 103 bits (246), Expect = 2e-22
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 16/188 (8%)
Frame = -2
Query: 609 DFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLTVCP 430
+F ++ SE+ +G Y LP+ + + G + LP N RP+G V+ YL V
Sbjct: 244 EFLAFYIEIFSEERK-RIGACYALPSSLQDASGIIHLPFI-NSSGRPIGQVSIEYLCVRA 301
Query: 429 IQEKLCNLQV---SYAKYWDSSWTGLEVGHRGLGASFKTKEGNAIRENTIASLKKAAASG 259
+ +L Q +Y ++W LEVGHRG G S+ TK A RENTI SL AA +G
Sbjct: 302 LT-RLDGPQFMDQTYCRHWKKR-NALEVGHRGAGNSY-TKFAMA-RENTIHSLNTAAKNG 357
Query: 258 ADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEIEF-----TEML--------ELPVKDL 118
AD +EFDVQL+KD I VIYHDF+V +S+ R+ + E L ELPVKDL
Sbjct: 358 ADYVEFDVQLTKDRIAVIYHDFHVLVSVARRDGLAMPPPMTREQLDSSNLDYHELPVKDL 417
Query: 117 TLEHLQKL 94
L L+ L
Sbjct: 418 KLSQLKLL 425
>Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 103 bits (246), Expect = 2e-22
Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 16/188 (8%)
Frame = -2
Query: 609 DFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLTVCP 430
+F ++ SE+ +G Y LP+ + + G + LP N RP+G V+ YL V
Sbjct: 321 EFLAFYIEIFSEERK-RIGACYALPSSLQDASGIIHLPFI-NSSGRPIGQVSIEYLCVRA 378
Query: 429 IQEKLCNLQV---SYAKYWDSSWTGLEVGHRGLGASFKTKEGNAIRENTIASLKKAAASG 259
+ +L Q +Y ++W LEVGHRG G S+ TK A RENTI SL AA +G
Sbjct: 379 LT-RLDGPQFMDQTYCRHWKKR-NALEVGHRGAGNSY-TKFAMA-RENTIHSLNTAAKNG 434
Query: 258 ADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEIEF-----TEML--------ELPVKDL 118
AD +EFDVQL+KD I VIYHDF+V +S+ R+ + E L ELPVKDL
Sbjct: 435 ADYVEFDVQLTKDRIAVIYHDFHVLVSVARRDGLAMPPPMTREQLDSSNLDYHELPVKDL 494
Query: 117 TLEHLQKL 94
L L+ L
Sbjct: 495 KLSQLKLL 502
>U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical
protein K10B3.6a protein.
Length = 757
Score = 97.5 bits (232), Expect = 8e-21
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 13/204 (6%)
Frame = -2
Query: 666 DVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTC 487
D + T + + LA+ I+FY R A +YVLP+ + G PV
Sbjct: 316 DYLVFRTRTVSLQNLAFRIEFYHGEKRCA---------LSYVLPSSMSGTHGATVSPVI- 365
Query: 486 NVKHRPLGTVNFGYLTVCPIQEKLCNLQV-----SYAKYWDSSWTGLEVGHRGLGASFKT 322
+ P+G +N Y+ V + NL + ++ +YW L++GHRG+G+S+
Sbjct: 366 GLSSAPVGHINVNYMIVKRNKYTDQNLDIDSMKTTFGRYWRKRNRMLQIGHRGMGSSYTK 425
Query: 321 KEGNAIRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKEIEFT-- 148
G RENTI SL +AA GAD +E DVQL+KD+ V+YHDF+V +++ + T
Sbjct: 426 NIGQ--RENTIFSLNEAARRGADYVEMDVQLTKDLKTVVYHDFHVLVAVAGRDSPSSTPT 483
Query: 147 ------EMLELPVKDLTLEHLQKL 94
+ E+ +KDLTL L L
Sbjct: 484 AAGENKSLHEIAIKDLTLAQLNLL 507
>Z78198-2|CAB01567.1| 296|Caenorhabditis elegans Hypothetical
protein F55C5.2 protein.
Length = 296
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -2
Query: 300 ENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHD 196
ENTI SLKKA G DL+EFD+ +S D +P++ HD
Sbjct: 45 ENTIESLKKAKEDGCDLVEFDIHMSSDGVPLLMHD 79
>AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical
protein T12B3.3 protein.
Length = 356
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -2
Query: 393 AKYWDSSWTGLEVG-HRGLGASFKTKEGNAIRENTIASLKKAAASGADLLEFDVQLSKDM 217
+K D+ ++G ++G HRG SF EN++A +A A GADL+EFDV L+KD
Sbjct: 53 SKNVDTFFSGFKIGGHRGAPKSFP--------ENSMAGFAQAKADGADLIEFDVALTKDG 104
Query: 216 IPVIYHD 196
V+ HD
Sbjct: 105 KAVLMHD 111
>U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical
protein K10B3.6b protein.
Length = 451
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = -2
Query: 666 DVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNMFKPSEGNLELPVTC 487
D + T + + LA+ I+FY R A +YVLP+ + G PV
Sbjct: 316 DYLVFRTRTVSLQNLAFRIEFYHGEKRCA---------LSYVLPSSMSGTHGATVSPVI- 365
Query: 486 NVKHRPLGTVNFGYLTVCPIQEKLCNLQV-----SYAKYWDSSWTGLEVGHRGLGASF 328
+ P+G +N Y+ V + NL + ++ +YW L++GHRG+G+S+
Sbjct: 366 GLSSAPVGHINVNYMIVKRNKYTDQNLDIDSMKTTFGRYWRKRNRMLQIGHRGMGSSY 423
>Z81127-1|CAB03386.1| 325|Caenorhabditis elegans Hypothetical
protein T22G5.1 protein.
Length = 325
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 306 IRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHD 196
I EN++ + + G L E D+Q++ D +PVI HD
Sbjct: 81 IPENSLEAFSAVKSEGGQLAEMDIQITMDGVPVICHD 117
>U00064-3|AAB52706.2| 375|Caenorhabditis elegans Hypothetical
protein ZC155.4 protein.
Length = 375
Score = 34.3 bits (75), Expect = 0.086
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 306 IRENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHD 196
I EN++ + G L E D+Q++ D +PVI HD
Sbjct: 131 IPENSLEAFSAVKREGGQLAEMDIQITLDGVPVICHD 167
>Z47070-2|CAA87343.2| 340|Caenorhabditis elegans Hypothetical
protein T09B9.3 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 309 AIRENTIASLKKAAASGADLLEFDVQLSKD-MIPVIYHD 196
++ +NTI + ++A +GAD + DV+++KD M+ V+ D
Sbjct: 77 SVHKNTIPAFRQAKQNGADTIVMDVRMTKDGMLIVLLPD 115
>U15129-1|AAB60240.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 612 IDFYSYSSRAASEDPPCHVGY--TYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLT 439
+D ++ RA ED P +GY T P+M + L+ + K +G+ GYLT
Sbjct: 35 VDRGDFAPRAPYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGS-GSGYLT 93
Query: 438 VC 433
VC
Sbjct: 94 VC 95
>U09669-1|AAA82166.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 612 IDFYSYSSRAASEDPPCHVGY--TYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLT 439
+D ++ RA ED P +GY T P+M + L+ + K +G+ GYLT
Sbjct: 35 VDRGDFAPRAPYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGS-GSGYLT 93
Query: 438 VC 433
VC
Sbjct: 94 VC 95
>AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform a protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 612 IDFYSYSSRAASEDPPCHVGY--TYVLPNMFKPSEGNLELPVTCNVKHRPLGTVNFGYLT 439
+D ++ RA ED P +GY T P+M + L+ + K +G+ GYLT
Sbjct: 35 VDRGDFAPRAPYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGS-GSGYLT 93
Query: 438 VC 433
VC
Sbjct: 94 VC 95
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 303 RENTIASLKKAAASGADLLEFDVQLSKDMIPVIYHDFYVCISMKRKKE 160
+EN + K +A++G ++L +VQLS M P + + VC R +E
Sbjct: 74 KENKLKCYKISASAGFEVLATNVQLSLAMYPKSF-NINVCFDFMRDQE 120
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -2
Query: 699 RNQFGREXKLNDVXLVNVTTPNPKQLAYXIDFYSYSSRAASEDPPCHVGYTYVLPNM 529
R+ G + NV P P Q +Y ++ S ++ + P H T++ PNM
Sbjct: 1197 RSYMGSSQGTRSMTYANVPYPEPPQPSYHSNWNSLQRQSNNNTSPQHHLSTFINPNM 1253
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 543 VLPNMFKPSEGNLELPVTCNVKHRPLGTV-NFGYLTVCPIQEKLCN 409
+LP+ + EGNL +P C+V +P G+V + P ++K N
Sbjct: 122 ILPHQWM--EGNLPMPSKCSVCEKPCGSVRKLIIFFLVPFEKKTSN 165
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 543 VLPNMFKPSEGNLELPVTCNVKHRPLGTV-NFGYLTVCPIQEKLCN 409
+LP+ + EGNL +P C+V +P G+V + P ++K N
Sbjct: 122 ILPHQWM--EGNLPMPSKCSVCEKPCGSVRKLIIFFLVPFEKKTSN 165
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 438 VCPIQEKLCNLQVSYAKYWDSSW 370
+ P ++CNL Y K+W S+W
Sbjct: 1952 IAPKILEICNLSGEYEKFWISTW 1974
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,436,749
Number of Sequences: 27780
Number of extensions: 321519
Number of successful extensions: 879
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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