Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14a18
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.                  32   2.6  
AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein.              32   2.6  
AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein.              32   2.6  
AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein.     32   2.6  
AY534911-1|AAT02709.1|  578|Homo sapiens hypothetical rhabdomyos...    31   3.4  
AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protei...    31   3.4  
AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen ...    31   3.4  

>L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.
          Length = 164

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 178 GIAPTRIP-TKDLATPLNQIH*AVTITTRSLSQSSGWCAPETRANYLPPTSETGSSARAS 354
           G  P+ +P T   + P      A T +T S   +S   AP T +  L PT+ T S+   S
Sbjct: 36  GTTPSPVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAP-TTSTTLAPTTSTTSAPTTS 94

Query: 355 SCRTPT*SLNYRSSPNQS 408
           +  TPT S    S+P  S
Sbjct: 95  TTSTPTSSTT--STPQTS 110


>AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein.
          Length = 2298

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 292  PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 420
            P+  A+  P +SE   SA  SSC T + + +  SSP+  L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138


>AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein.
          Length = 2298

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 292  PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 420
            P+  A+  P +SE   SA  SSC T + + +  SSP+  L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138


>AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein.
          Length = 2147

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +1

Query: 292  PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 420
            P+  A+  P +SE   SA  SSC T + + +  SSP+  L EL
Sbjct: 945  PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 987


>AY534911-1|AAT02709.1|  578|Homo sapiens hypothetical
           rhabdomyosarcoma antigen MU-RMS-40.15 protein.
          Length = 578

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 523 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 389
           E++ EN ++ D   A+  ++ DCVT E+P   +   + E+   KN
Sbjct: 306 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 349


>AY028423-1|AAK27730.1|  852|Homo sapiens PRIP-interacting protein
           PIPMT protein.
          Length = 852

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 523 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 389
           E++ EN ++ D   A+  ++ DCVT E+P   +   + E+   KN
Sbjct: 580 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 623


>AF432215-1|AAL99922.1|  853|Homo sapiens CLL-associated antigen
           KW-2 protein.
          Length = 853

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 523 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 389
           E++ EN ++ D   A+  ++ DCVT E+P   +   + E+   KN
Sbjct: 581 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 624


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,840,804
Number of Sequences: 237096
Number of extensions: 2356682
Number of successful extensions: 6260
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6257
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)