Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a14
(284 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 39 5e-04
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 38 9e-04
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 38 0.001
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 38 0.002
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 36 0.005
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 36 0.005
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 36 0.006
Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical pr... 33 0.025
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 33 0.025
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.025
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 33 0.025
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 33 0.033
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 33 0.044
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 32 0.076
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.13
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 31 0.18
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 30 0.31
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 29 0.41
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 29 0.41
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 29 0.54
U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine rece... 29 0.54
Z78413-3|CAB01659.1| 202|Caenorhabditis elegans Hypothetical pr... 29 0.71
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 29 0.71
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 29 0.71
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 29 0.71
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 29 0.71
Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical pr... 28 0.94
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 28 1.2
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 28 1.2
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 28 1.2
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 28 1.2
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 1.6
AC087079-16|AAO12401.2| 509|Caenorhabditis elegans Hypothetical... 27 1.6
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 27 1.6
AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical ... 27 2.2
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 27 2.9
U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine rece... 27 2.9
Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 26 3.8
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 26 3.8
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 26 3.8
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 26 3.8
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 26 3.8
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 26 3.8
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 26 3.8
AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 26 3.8
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 26 3.8
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 26 5.0
AF022972-4|AAC48236.2| 528|Caenorhabditis elegans Udp-glucurono... 26 5.0
AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical ... 26 5.0
Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z72509-6|CAA96650.1| 223|Caenorhabditis elegans Hypothetical pr... 25 6.6
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 25 6.6
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 25 6.6
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 25 6.6
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 25 6.6
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 25 6.6
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 25 6.6
AF040653-10|AAB95029.1| 580|Caenorhabditis elegans F-box b prot... 25 6.6
AF025460-4|AAB70987.1| 156|Caenorhabditis elegans Hypothetical ... 25 6.6
AF024503-11|AAG24091.2| 325|Caenorhabditis elegans Serpentine r... 25 6.6
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z83216-12|CAB05675.2| 323|Caenorhabditis elegans Hypothetical p... 25 8.7
Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z78065-4|CAB01514.2| 344|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z75537-5|CAA99837.3| 335|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 25 8.7
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 25 8.7
U51997-6|AAG24064.1| 159|Caenorhabditis elegans Hypothetical pr... 25 8.7
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 25 8.7
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 25 8.7
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 39.1 bits (87), Expect = 5e-04
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 95 MEYDCAVCLQKCQHPTKL-SCGHVFCFLCVK 6
++ +CAVC + PT + SCGH FCF+C+K
Sbjct: 20 IDKECAVCYSEMILPTTIPSCGHKFCFICLK 50
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 38.3 bits (85), Expect = 9e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 101 HNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 9
H ++C +CL P CGH+FC C+
Sbjct: 99 HQSSHECPICLANASFPVLTDCGHIFCCECI 129
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 37.9 bits (84), Expect = 0.001
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 98 NMEYDCAVCLQKCQHPTKL-SCGHVFCFLCVK 6
N++ +C +C K PT + +CGH FCF+C+K
Sbjct: 7 NIDAECPICQCKMIVPTTIPACGHKFCFICLK 38
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 37.5 bits (83), Expect = 0.002
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = -1
Query: 89 YDCAVCLQKCQHPTKLSCGHVFCFLCVK 6
+ C++CL+ ++P+ L CGH+FC+ C++
Sbjct: 253 FQCSICLEN-KNPSALFCGHLFCWTCIQ 279
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 92 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 6
E CAVC P KL C HVFC C++
Sbjct: 334 EQPCAVCHGDLLQPIKLECTHVFCKFCIE 362
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.005
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C +C P +L C H FC++C+K
Sbjct: 5 CTICHNTPNRPVRLDCNHEFCYICIK 30
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.006
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 83 CAVCLQKCQHPTKL-SCGHVFCFLCVK 6
C +C K PT++ +CGH FC++C+K
Sbjct: 107 CYICYYKLTIPTRIENCGHEFCYVCLK 133
>Z66561-4|CAA91457.2| 185|Caenorhabditis elegans Hypothetical
protein F08G12.5 protein.
Length = 185
Score = 33.5 bits (73), Expect = 0.025
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 83 CAVCLQKCQH-PTKLSCGHVFCFLCVK 6
CAVCL Q P L+CGH FC C++
Sbjct: 40 CAVCLNIFQGIPQTLTCGHSFCHRCIE 66
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.025
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C +CL + + P L C H FC+ C++
Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCLE 68
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 33.5 bits (73), Expect = 0.025
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 92 EYDCAVCLQKCQHPTKLSCGHVFCFLCVK 6
++ CAVCL P + CGH +C C++
Sbjct: 5 DFCCAVCLDFFVEPCIIECGHSYCRFCIE 33
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.025
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C +CL + + P L C H FC+ C++
Sbjct: 43 CPICLDRYKQPKLLPCQHTFCYPCLE 68
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 33.1 bits (72), Expect = 0.033
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = -1
Query: 98 NMEYDCAVCLQKCQ---H-PTKLSCGHVFCFLCVK 6
NM+ C++C+++ H P L CGH FC +C++
Sbjct: 21 NMKPTCSICMEEFDANSHIPKVLICGHSFCIICIE 55
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.044
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLC 12
C CLQ + P L CGH C +C
Sbjct: 110 CPHCLQIFEQPISLQCGHSLCLIC 133
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 31.9 bits (69), Expect = 0.076
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 92 EYDCAVCLQKCQHPTKLSCGHVFCFLC 12
E C +C++ + P L+CGH C +C
Sbjct: 4 ELKCTICIRFFEDPIILTCGHSLCRMC 30
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 31.1 bits (67), Expect = 0.13
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 89 YDCAVCLQKCQHPTKLSCGHVFCFLCV 9
++C +CL + CGH+FC+ C+
Sbjct: 24 FECNICLDAAKDAVVSLCGHLFCWPCL 50
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 30.7 bits (66), Expect = 0.18
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLS----CGHVFCFLCVK 6
C VC Q TKL+ CGH FC C++
Sbjct: 22 CQVCYQPFNETTKLARSLHCGHTFCTECIR 51
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 29.9 bits (64), Expect = 0.31
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLS----CGHVFCFLCVK 6
C VC TKL+ CGH FC C+K
Sbjct: 38 CQVCCTNYNETTKLARGLHCGHTFCTECIK 67
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 29.5 bits (63), Expect = 0.41
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C +C Q P ++CGH +C C++
Sbjct: 56 CPLCDQLFDRPVMVTCGHSYCEPCIE 81
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 29.5 bits (63), Expect = 0.41
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C +C Q P ++CGH +C C++
Sbjct: 56 CPLCDQLFDRPVMVTCGHSYCEPCIE 81
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 29.1 bits (62), Expect = 0.54
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 92 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 9
E C +C + P +C H+FC C+
Sbjct: 18 ELKCGICCSTYKDPILSTCFHIFCRSCI 45
>U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 9 protein.
Length = 341
Score = 29.1 bits (62), Expect = 0.54
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -2
Query: 130 YSSMLY*FSHIIWNMIVLFACKNVNIQQNYPAV----MFSVF 17
+S++L+ F H +W++++ FA +N + P+ MFSVF
Sbjct: 92 WSALLHLFIHSMWSLLLSFAYRNYILSSAPPSTWKVFMFSVF 133
>Z78413-3|CAB01659.1| 202|Caenorhabditis elegans Hypothetical
protein T01C3.3 protein.
Length = 202
Score = 28.7 bits (61), Expect = 0.71
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKL----SCGHVFCFLCV 9
+C VC QK T++ CGH C C+
Sbjct: 132 ECLVCYQKFDENTRIPRVMDCGHTLCDFCI 161
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 28.7 bits (61), Expect = 0.71
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -1
Query: 104 SHNMEYDCAVCLQKCQHPTKLS---CGHVFCFLCV 9
SH+ + C +CL++ + T+L CGH F CV
Sbjct: 310 SHSAQERCVICLEEYEEGTELRVLFCGHEFHPKCV 344
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 28.7 bits (61), Expect = 0.71
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Frame = -1
Query: 86 DCAVCLQKCQ-----HPTKLSCGHVFCFLCVKV 3
+C +C +K + P +CGH +C C++V
Sbjct: 137 ECKICFEKYEVTGNRSPRVFNCGHTYCESCIQV 169
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 28.7 bits (61), Expect = 0.71
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -1
Query: 86 DCAVCLQKCQ----H-PTKLSCGHVFCFLCVK 6
+C +C + + H P LSCGH +C +C++
Sbjct: 18 ECKICYKNYETSGDHCPRVLSCGHTYCEICIQ 49
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Frame = -1
Query: 86 DCAVCL---QKCQHPTKL--SCGHVFCFLCV 9
+C++C QH KL +CGH FC+ C+
Sbjct: 33 ECSICFFDFDDFQHLPKLLENCGHTFCYSCL 63
>Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical
protein F08B12.2 protein.
Length = 359
Score = 28.3 bits (60), Expect = 0.94
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSC-GHVFCFLCV 9
C +CL+K + T L G+VFC+ C+
Sbjct: 307 CPICLKKRVNDTALFVSGYVFCYTCI 332
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -1
Query: 116 VLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 9
+L + ++E +C +C++ + L C H FC C+
Sbjct: 118 ILTQTSDVEGNCVICMENI-NDLLLPCLHAFCIRCI 152
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +1
Query: 79 AQSYSILCEKINTACLSTHKLSHTYLPISKLLKYVCSFVVFHNFLTFQINFGWIRTNIM 255
+ S++I ++ T L +H +S +L KL++Y NF+ W+ T ++
Sbjct: 180 SSSWTINFVRVGTLILLSHDVSDVFLEGGKLVRYDAHNKNMTNFMFVLFFSSWVATRLI 238
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +1
Query: 79 AQSYSILCEKINTACLSTHKLSHTYLPISKLLKYVCSFVVFHNFLTFQINFGWIRTNIM 255
+ S++I ++ T L +H +S +L KL++Y NF+ W+ T ++
Sbjct: 180 SSSWTINFVRVGTLILLSHDVSDVFLEGGKLVRYDAHNKNMTNFMFVLFFSSWVATRLI 238
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Frame = -1
Query: 83 CAVCLQKCQH----PTKLSCGHVFCFLCV 9
C VC + H P L CGH FC C+
Sbjct: 24 CEVCFEVFNHENRPPKLLPCGHNFCESCI 52
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLC 12
C +C + + P LSC H C C
Sbjct: 8 CTICKNEFEEPILLSCQHTTCRKC 31
>AC087079-16|AAO12401.2| 509|Caenorhabditis elegans Hypothetical
protein Y37E3.16 protein.
Length = 509
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +1
Query: 79 AQSYSILCEKINTACLSTHKLSHTYLPI--SKLL-----KYVCSFVVFHNFLTFQI 225
+QS S+ K+N+ L ++S LP +LL +YVC F++ +N ++ I
Sbjct: 137 SQSESVDLAKVNSILLCIDQISSAILPTLTGELLDTFKWQYVCGFIIVYNLASWVI 192
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 65 KCQHPTKLSCGHVFCFLCVKV 3
KCQ P CG FCF C KV
Sbjct: 151 KCQRP---GCGREFCFKCRKV 168
>AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical
protein F56A6.5 protein.
Length = 191
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKL----SCGHVFCFLC 12
+C++C + H T++ +CGH C C
Sbjct: 5 ECSICYDEYDHDTQIPCIGTCGHTICDRC 33
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCV 9
C +C P L C H FC C+
Sbjct: 100 CTICYDIIVEPHTLRCQHSFCKKCI 124
>U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 13 protein.
Length = 325
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -2
Query: 130 YSSMLY*FSHIIWNMIVLFA 71
YS ML+ FSH +W++++ F+
Sbjct: 93 YSLMLHCFSHSLWSLLLSFS 112
>Z68004-3|CAA91983.2| 380|Caenorhabditis elegans Hypothetical
protein F47B10.3 protein.
Length = 380
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = -2
Query: 187 YTHI*VIWKWVDKYEIIYVYSSMLY*FSH----IIWNMIVLFACKNVNIQQNYPAVMFSV 20
YT W W+ + + YSS L+ F + W I++ A K + ++Y + +
Sbjct: 87 YTSSYTFWSWIHDSVVSFCYSSFLFNFQYGMVLYSWQSIIV-AVKKRPVTKSYTRWPYIL 145
Query: 19 FF 14
F
Sbjct: 146 LF 147
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 582 DCLNALQKKWHPTCFTCAH 600
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 1322 DCLNALQKKWHPTCFTCAH 1340
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 669 DCLNALQKKWHPTCFTCAH 687
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 543 DCLNALQKKWHPTCFTCAH 561
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 582 DCLNALQKKWHPTCFTCAH 600
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 1322 DCLNALQKKWHPTCFTCAH 1340
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 669 DCLNALQKKWHPTCFTCAH 687
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 86 DCAVCLQKCQHPTKLSCGH 30
DC LQK HPT +C H
Sbjct: 543 DCLNALQKKWHPTCFTCAH 561
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = -1
Query: 83 CAVCLQK---CQHPTKLSCGHVFCFLC 12
C C++K C H C H FC++C
Sbjct: 290 CHSCIEKAGGCNHIQCTRCRHHFCWMC 316
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = -1
Query: 92 EYDCAVCLQK--CQHPTKLSCGHVFCFLCV 9
E C +CL Q C H FCF C+
Sbjct: 65 ELQCTICLSTRFSQECRIEGCNHSFCFSCI 94
>AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical
protein Y54F10BM.6 protein.
Length = 280
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Frame = -1
Query: 83 CAVCLQKC-----QHPTKLSCGHVFCFLCVKV 3
C +CL + P ++CGH +C C+++
Sbjct: 65 CGICLAQYWSTGDMAPRVMNCGHTYCGSCIEI 96
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 26.2 bits (55), Expect = 3.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 59 QHPTKLSCGHVFCFLC 12
+HP L+CGH C C
Sbjct: 20 RHPKNLTCGHSICKAC 35
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = -1
Query: 83 CAVCLQKCQH-----PTKLSCGHVFCFLCVK 6
C +C + H P L CGH C C++
Sbjct: 199 CEICAHQFSHSDEYVPRVLVCGHTLCTSCIE 229
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 47 KLSCGHVFCFLCVK 6
KLSCGHVF C++
Sbjct: 330 KLSCGHVFHEFCIR 343
>AF022972-4|AAC48236.2| 528|Caenorhabditis elegans
Udp-glucuronosyltransferase protein37 protein.
Length = 528
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 88 MIVLFACKNVNIQQNYPAVMFSVFF 14
+I+LFAC NVN N+ ++FS F
Sbjct: 4 LILLFACFNVNFSYNF--LIFSPLF 26
>AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical
protein Y54E10A.6 protein.
Length = 507
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 73 QTAQSYSILCEKINTACLSTHKLSHTYLPI 162
QT S LCE + + TH+L LP+
Sbjct: 323 QTKMHASALCENRTLSAIGTHRLDSFQLPL 352
>Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical
protein F53F8.3 protein.
Length = 209
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 59 QHPTKLSCGHVFCFLCVK 6
Q P L CGH C CV+
Sbjct: 156 QTPRVLGCGHTMCMGCVQ 173
>Z72509-6|CAA96650.1| 223|Caenorhabditis elegans Hypothetical
protein F32G8.6 protein.
Length = 223
Score = 25.4 bits (53), Expect = 6.6
Identities = 6/23 (26%), Positives = 17/23 (73%)
Frame = +2
Query: 29 HDRRIVLLDVDIFASKQHNHIPY 97
HD +++ D+++F+ +H+ +P+
Sbjct: 98 HDEMVIVKDIEMFSLCEHHLVPF 120
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 25.4 bits (53), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 53 PTKLSCGHVFCFLC 12
P L+CGHV C +C
Sbjct: 20 PKNLNCGHVICPVC 33
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 6/31 (19%)
Frame = -1
Query: 83 CAVCLQK-----CQH-PTKLSCGHVFCFLCV 9
C +C + +H P L+CGH C C+
Sbjct: 6 CKICFDRFSDTDSEHIPRNLTCGHALCHKCI 36
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C C + + L C H+FC C+K
Sbjct: 782 CPSCKTRPKDCIMLKCYHLFCETCIK 807
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 83 CAVCLQKCQHPTKLSCGHVFCFLCVK 6
C C + + L C H+FC C+K
Sbjct: 785 CPSCKTRPKDCIMLKCYHLFCETCIK 810
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = -1
Query: 86 DCAVCL----QKCQHPTKLSCGHVFCFLCV 9
+C +C + + P + CGH C CV
Sbjct: 175 ECTICYLSYDNEARVPRVMKCGHTICHTCV 204
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = -1
Query: 86 DCAVCL----QKCQHPTKLSCGHVFCFLCV 9
+C +C + + P + CGH C CV
Sbjct: 175 ECTICYLSYDNEARVPRVMKCGHTICHTCV 204
>AF040653-10|AAB95029.1| 580|Caenorhabditis elegans F-box b protein
protein 49 protein.
Length = 580
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 142 SHTYLPISKLLKYVCSFV-VFHNFLTFQ 222
S YLP+++LL CSF+ F+ LT Q
Sbjct: 170 SSIYLPLNELLFVTCSFIDTFYPELTEQ 197
>AF025460-4|AAB70987.1| 156|Caenorhabditis elegans Hypothetical
protein F53A3.1 protein.
Length = 156
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 148 TYLPISKLLKYVCSFVVFHNFL 213
T+LP+ KL + +C F+V FL
Sbjct: 10 TWLPMIKLAQAICHFIVIMVFL 31
>AF024503-11|AAG24091.2| 325|Caenorhabditis elegans Serpentine
receptor, class u protein24 protein.
Length = 325
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 140 YLILIYPFPNYLNMCVV 190
YLI+I PF N L+ C+V
Sbjct: 280 YLIVIRPFTNDLDTCIV 296
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = -1
Query: 83 CAVCLQKCQH---PTKLSCGHVFCFLCVK 6
C++C + P L CGHV C C +
Sbjct: 16 CSICNRHFNETFLPVSLICGHVICRKCAE 44
>Z83216-12|CAB05675.2| 323|Caenorhabditis elegans Hypothetical
protein C08F11.4 protein.
Length = 323
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 140 YLILIYPFPNYLNMCVV 190
YLI+I PF N ++ CVV
Sbjct: 278 YLIVIRPFTNDIDTCVV 294
>Z82073-5|CAB63322.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.7 protein.
Length = 333
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 94 ILCEKINTACLSTHKLSHTYLPISKLLKYVCSFVVFHNFLTFQINFGWIRTNIMCLSWSY 273
+L + I+ L T + L S L C+ V F+ F + N W+RT L+W++
Sbjct: 84 LLIDFIDAKVLYTSMYILSALSTSSCLLLFCNSV-FNIFNMLRNNKSWLRTFSEWLAWTF 142
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = -1
Query: 83 CAVCLQKCQHPTK----LSCGHVFCFLCV 9
C VC + + L CGH FC CV
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHTFCTRCV 91
>Z78065-4|CAB01514.2| 344|Caenorhabditis elegans Hypothetical
protein T09E8.5 protein.
Length = 344
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 94 WNMIVLFACKNVNIQQNYPAVMF 26
WN + FA K + QNYP +F
Sbjct: 153 WNCQMTFAQKYEYLSQNYPECLF 175
>Z75537-5|CAA99837.3| 335|Caenorhabditis elegans Hypothetical
protein F18E2.4 protein.
Length = 335
Score = 25.0 bits (52), Expect = 8.7
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +1
Query: 64 FCKQTAQSYSILCEKINTACLSTHKLSHTYLPISKLLKYVCSFVVF----HNFLTFQINF 231
FC T Y+I C IN + + S + +CSF F +N L F +
Sbjct: 213 FCSGTCTLYAIYCVLINK--MQRGQKSKASRQVFIQSSIICSFNTFSAMSYNALMFTVPA 270
Query: 232 GWIRTNIMCLSWS 270
W+ I L WS
Sbjct: 271 PWV-IAIAELCWS 282
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = -1
Query: 83 CAVCLQKCQH---PTKLSCGHVFCFLCVK 6
C++C + P L CGHV C C +
Sbjct: 16 CSICNRHFNETFLPVSLICGHVICRKCAE 44
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 47 KLSCGHVFCFLCVKV 3
+L CGH+F F CV++
Sbjct: 3532 RLGCGHMFHFHCVRM 3546
>U51997-6|AAG24064.1| 159|Caenorhabditis elegans Hypothetical
protein F19G12.1 protein.
Length = 159
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = -1
Query: 83 CAVCLQKC-----QHPTKLSCGHVFCFLCVK 6
CAVCL + P SC H +C C++
Sbjct: 95 CAVCLDSYASRGPKKPKVFSCLHTYCDACIR 125
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 89 YDCAVCLQKCQHPTKLS-CGHVFCFLCVKV 3
+ C VC + Q CGH FC C+ V
Sbjct: 160 FSCDVCQELIQGSIMTKKCGHRFCDQCILV 189
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 56 HPTKLSCGHVFCFLCV 9
HP L+CGH C C+
Sbjct: 169 HPIILNCGHNLCRSCI 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,598,543
Number of Sequences: 27780
Number of extensions: 124361
Number of successful extensions: 508
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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