Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14a08
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062195-1|AAL58556.1|  139|Anopheles gambiae cytochrome P450 CY...    31   0.056
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    28   0.30 
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    27   0.68 
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    27   0.68 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    27   0.68 
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    24   4.8  

>AY062195-1|AAL58556.1|  139|Anopheles gambiae cytochrome P450
           CYP4H18 protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.056
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = -2

Query: 505 LSLTIAFLNKYK--KYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQ 332
           +S TI  L K++  + R  + ID +L E K  +  TN  L+         DF YLD   +
Sbjct: 17  ISFTILHLAKHQDVQQRLYEEIDRMLGEEKTNVPLTNALLQ---------DFKYLDMVIK 67

Query: 331 EIKPLKLEVPILHMAIIDTLGTTRSLPESG 242
           E   L   VPI+   +++ +    ++  +G
Sbjct: 68  ESLRLVPPVPIIGRKLLEDMEINGAIIPAG 97


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = -2

Query: 589  LREEAKKTQLVGKENPISIPVIFIEILVLSLTIAFLNKYKKYRAKDRID--ELLNESKEA 416
            L EEA K +   +E  ++I         +   I  L K +      R++  ++L   +  
Sbjct: 961  LEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETK 1020

Query: 415  IRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKPLK 314
            +++T + L  W+L+  P     + EEP + +PLK
Sbjct: 1021 LQETKDTLPHWQLQLKPLKLHEIPEEPPQ-EPLK 1053


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 433 NESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKPLKLEVP 302
           +E  E +R   +FL+  +   +  +   L++EP E KP + E P
Sbjct: 107 SEEDENLRAPRDFLDAGKPNDLQQEGETLNKEPVETKPQESEPP 150


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -2

Query: 466 YRAKDRIDELLNESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMA 287
           YR    ID  L  ++EA  Q  E    WR      D +YL+  P + + L+ ++  +  A
Sbjct: 128 YREVIEIDARLVPAQEASCQLGEASAGWRRLTGAADSTYLEMVPLDEQDLRSKLEEVRAA 187

Query: 286 IIDTL 272
            I++L
Sbjct: 188 GINSL 192


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -2

Query: 466 YRAKDRIDELLNESKEAIRQTNEFLEKWRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMA 287
           YR    ID  L  ++EA  Q  E    WR      D +YL+  P + + L+ ++  +  A
Sbjct: 128 YREVIEIDARLVPAQEASCQLGEASAGWRRLTGAADSTYLEMVPLDEQDLRSKLEEVRAA 187

Query: 286 IIDTL 272
            I++L
Sbjct: 188 GINSL 192


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 575 RLLSQCFLHETSYLAEYRLEHINETI 652
           R L   F+H+   L   +L H+N+TI
Sbjct: 209 RDLKNAFVHDKFQLGYTQLPHVNQTI 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,258
Number of Sequences: 2352
Number of extensions: 15978
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)