Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a08
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 33 1.6
AJ316534-1|CAC48387.1| 1231|Homo sapiens serine/threonine protei... 33 1.6
AF390018-1|AAK91995.1| 1243|Homo sapiens putative protein kinase... 33 1.6
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 33 1.6
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 32 2.1
L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine cytidy... 32 2.8
BC046355-1|AAH46355.1| 367|Homo sapiens phosphate cytidylyltran... 32 2.8
BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein. 30 8.6
BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein LO... 30 8.6
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein. 30 8.6
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 442 ELLNESKEAIRQTNEFLEK--WRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMAI 284
ELL +++E +RQ E LE+ WRLRR+ + + Q K + E LH+A+
Sbjct: 466 ELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEE--LHLAV 518
>AJ316534-1|CAC48387.1| 1231|Homo sapiens serine/threonine protein
kinase protein.
Length = 1231
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +1
Query: 556 QPIAFFSPPLAMFSSRNKLSCRISFGTYQRNHCLTNNRPGINLKRRKCTSKCST 717
QP P AM SSR + + SF T +RN + PG + RR S ST
Sbjct: 1158 QPPPGIVAPAAMLSSRQRRLSKGSFPTSRRNSLQRSEPPGPGIMRRNSLSGSST 1211
>AF390018-1|AAK91995.1| 1243|Homo sapiens putative protein kinase WNK4
protein.
Length = 1243
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +1
Query: 556 QPIAFFSPPLAMFSSRNKLSCRISFGTYQRNHCLTNNRPGINLKRRKCTSKCST 717
QP P AM SSR + + SF T +RN + PG + RR S ST
Sbjct: 1170 QPPPGIVAPAAMLSSRQRRLSKGSFPTSRRNSLQRSEPPGPGIMRRNSLSGSST 1223
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome
associated protein protein.
Length = 2442
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 442 ELLNESKEAIRQTNEFLEK--WRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMAI 284
ELL +++E +RQ E LE+ WRLRR+ + + Q K + E LH+A+
Sbjct: 466 ELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEE--LHLAV 518
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal
Nek2-associated protein 1 protein.
Length = 2442
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 442 ELLNESKEAIRQTNEFLEK--WRLRRIPTDFSYLDEEPQEIKPLKLEVPILHMAI 284
ELL +++E +RQ E LE+ WRLRR+ + + Q K + E LH+A+
Sbjct: 466 ELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEDQQEE--LHLAV 518
>L28957-1|AAA72127.1| 367|Homo sapiens CTP:phosphocholine
cytidylyltransferase protein.
Length = 367
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = -2
Query: 499 LTIAFLNKYKKYRAKDRIDELLNESKEAIRQTNEFLEK 386
L ++F+N+ KKY ++R+D++ + K+ ++ EF++K
Sbjct: 230 LNVSFINE-KKYHLQERVDKVKEKVKDVEEKSKEFVQK 266
>BC046355-1|AAH46355.1| 367|Homo sapiens phosphate
cytidylyltransferase 1, choline, alpha protein.
Length = 367
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = -2
Query: 499 LTIAFLNKYKKYRAKDRIDELLNESKEAIRQTNEFLEK 386
L ++F+N+ KKY ++R+D++ + K+ ++ EF++K
Sbjct: 230 LNVSFINE-KKYHLQERVDKVKKKVKDVEEKSKEFVQK 266
>BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 74 LDTFR--SVQKSIIHIDVIRFVCQFIINRIR 160
LDTF+ S ++S HIDV+RF C IN +R
Sbjct: 12 LDTFKHPSAEQSS-HIDVVRFPCVVYINEVR 41
>BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein
LOC25962, isoform 2 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 74 LDTFR--SVQKSIIHIDVIRFVCQFIINRIR 160
LDTF+ S ++S HIDV+RF C IN +R
Sbjct: 12 LDTFKHPSAEQSS-HIDVVRFPCVVYINEVR 41
>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
Length = 1795
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 74 LDTFR--SVQKSIIHIDVIRFVCQFIINRIR 160
LDTF+ S ++S HIDV+RF C IN +R
Sbjct: 10 LDTFKHPSAEQSS-HIDVVRFPCVVYINEVR 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,752,266
Number of Sequences: 237096
Number of extensions: 2350374
Number of successful extensions: 8748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8748
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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