Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a07
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 434 e-122
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 431 e-121
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 427 e-120
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 417 e-117
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 168 4e-42
03_01_0034 + 318432-318825,318902-319851 168 4e-42
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 168 4e-42
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 168 5e-42
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 166 2e-41
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 166 2e-41
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 166 2e-41
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 163 1e-40
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 81 8e-16
01_06_1014 - 33810112-33811995 31 0.81
12_02_1026 - 25478462-25479232,25479249-25479821 29 4.3
03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508 29 4.3
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 29 5.7
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 5.7
07_03_0700 + 20797600-20798064 28 7.5
07_01_0008 - 56178-57095 28 7.5
09_02_0118 - 4451228-4452565 28 9.9
04_01_0280 - 3757107-3758180 28 9.9
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 434 bits (1069), Expect = e-122
Identities = 194/226 (85%), Positives = 213/226 (94%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
CRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +Y
Sbjct: 213 CRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
APVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 273 APVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
TIKTKRT+QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE +SR++
Sbjct: 333 ATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRID 392
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 125
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 431 bits (1061), Expect = e-121
Identities = 191/227 (84%), Positives = 214/227 (94%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
CRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +Y
Sbjct: 213 CRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSY 272
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
APVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 273 APVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
TIKTKRTIQFVDWCPTGFK GINYQPP+VVP GDLAKVQRAVCM+SN+T++ E +SR++
Sbjct: 333 ATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRID 392
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 122
HKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 393 HKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 427 bits (1052), Expect = e-120
Identities = 190/226 (84%), Positives = 213/226 (94%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
CRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +Y
Sbjct: 213 CRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSY 272
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
APVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 273 APVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
TIKTKRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN+T++ E +SR++
Sbjct: 333 ATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRID 392
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 125
KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 393 IKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 417 bits (1027), Expect = e-117
Identities = 184/226 (81%), Positives = 209/226 (92%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C+R+LDIERPTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +Y
Sbjct: 294 CKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSY 353
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+IS EKA+HEQ SV EITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 354 APIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 413
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
+IKT+RT+QFVDWCPTGFK GINYQPPT VPGGDLAKV+RAVCM+SN TA+AE +SR++
Sbjct: 414 HSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRID 473
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 125
KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 474 RKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 168 bits (409), Expect = 4e-42
Identities = 78/222 (35%), Positives = 128/222 (57%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 211 CFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP ++ A + N+T+I E + R++
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLKMAATFVGNSTSIQEMFRRVS 382
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 168 bits (409), Expect = 4e-42
Identities = 78/222 (35%), Positives = 129/222 (58%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 211 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PPT ++ A + N+T+I E + R++
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVS 382
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 168 bits (409), Expect = 4e-42
Identities = 78/222 (35%), Positives = 128/222 (57%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 211 CFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP ++ A + N+T+I E + R++
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSSVCDIPPN--------GLKMASTFIGNSTSIQEMFRRVS 382
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 168 bits (408), Expect = 5e-42
Identities = 78/222 (35%), Positives = 128/222 (57%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 211 CFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP ++ A + N+T+I E + R++
Sbjct: 331 LNVQNKNSSYFVEWIPNNVKSSVCDIPP--------IGLKMASTFIGNSTSIQEMFRRVS 382
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 166 bits (404), Expect = 2e-41
Identities = 77/222 (34%), Positives = 127/222 (57%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 232 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 291
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 292 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 351
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP + A + N+T+I E + R++
Sbjct: 352 INVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVS 403
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 404 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 166 bits (404), Expect = 2e-41
Identities = 77/222 (34%), Positives = 127/222 (57%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 211 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 270
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 271 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 330
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP + A + N+T+I E + R++
Sbjct: 331 INVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVS 382
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 166 bits (403), Expect = 2e-41
Identities = 77/222 (34%), Positives = 127/222 (57%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 391 CFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 450
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 451 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 510
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP + A + N+T+I E + R++
Sbjct: 511 INVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVS 562
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 563 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 163 bits (397), Expect = 1e-40
Identities = 76/222 (34%), Positives = 126/222 (56%)
Frame = -1
Query: 802 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTY 623
C R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +
Sbjct: 227 CFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGF 286
Query: 622 APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 443
AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ +
Sbjct: 287 APLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQM 346
Query: 442 GTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLN 263
++ K + FV+W P K + PP + A + N+T+I E + R++
Sbjct: 347 INVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVS 398
Query: 262 HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 137
+F M+ ++AF+HWY EGM+E EF+EA ++ L +Y++
Sbjct: 399 EQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 81.4 bits (192), Expect = 8e-16
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 10/227 (4%)
Frame = -1
Query: 790 LDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV- 614
L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 218 LHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLT 277
Query: 613 ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNA 449
+ + + +V ++ + N MV R+ KY++ + +G+V P V+
Sbjct: 278 VERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHE 337
Query: 448 AIGTIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSR 269
++ I+ ++ + F++W P A +Q + ML+N T+I +S+
Sbjct: 338 SLQRIRERKLVNFIEWGP--------------------ASIQVSGLMLANHTSIRHLFSK 377
Query: 268 LNHKFDLMYAKRAFVHWY----VGEGMEEGEFSEAREDLAALEKDYE 140
+++ + K+AF+ Y + E + EF E+RE + +L +Y+
Sbjct: 378 CLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.81
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 241 AKRAFVHWYVGEGMEEGEFSEAREDL 164
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>12_02_1026 - 25478462-25479232,25479249-25479821
Length = 447
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -3
Query: 404 LVPDRIQGGDKLSATNCGTGWRFGEGAARRVHA----VQYYCHSRGV 276
LV + GGD LS R E AARRV YCH+RGV
Sbjct: 99 LVMELATGGDLLSRLAALPRRRLPESAARRVFVQLVDALSYCHARGV 145
>03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508
Length = 234
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 216 YQCTNARLAYIKSNLWLRRDHASAMAVVLDSMH 314
Y+ N R+ Y+KSN W H A + ++D++H
Sbjct: 112 YKIENYRVLYLKSNCW----HEGASSEIIDAIH 140
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -2
Query: 153 RKTTKRWEWIPVRAREKAARNINFTIYFLGCLWILLRSRVCFSLWL 16
R+ T +W+ P +E+A + T+ + W LR R C + +L
Sbjct: 343 RQETVQWKLFPFSLQERAKQWYTSTVGCVNGSWEKLRDRFCLAFFL 388
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 700 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 572
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>07_03_0700 + 20797600-20798064
Length = 154
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 273 LASTTSLI*CMPSVHS--CIGTWERGWRKASFQKPVRI 166
+ S+ +++ C P + C+G W+ WR+A ++ + I
Sbjct: 69 MVSSAAVLFCFPGIWGPFCLGLWKTIWRRAGWRGLINI 106
>07_01_0008 - 56178-57095
Length = 305
Score = 28.3 bits (60), Expect = 7.5
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +1
Query: 175 GLLKTRLPPSPLPRTNARMHAWHTSNQTCG*GETTPLLWQ*YWTACTRRAA-PSPNLHPV 351
G + L PS P AR+H+W N T Q +A +RR A P +LHP+
Sbjct: 118 GTAASHLAPSSAP---ARLHSWIHYNATSA-------TLQLRLSATSRRPALPLLSLHPL 167
Query: 352 PQLVADSLSPP*ILSGTSLQTEWCVSF*W 438
P L +L+G + C F W
Sbjct: 168 PPSALLLLRTKPMLAGFTSSATNCTLFAW 196
>09_02_0118 - 4451228-4452565
Length = 445
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +1
Query: 190 RLPPSPLPRTNARMHAWHTSNQTCG*GETTPLLWQ*YWTACT----RRAAPSPNLHPVPQ 357
RL P+ L R H W + C PLL + A T AP LHP
Sbjct: 28 RLAPADLLRAALVCHRWRRAAARCVMAAPPPLLGYFFHPADTPLTAHIVAPIAALHPAAF 87
Query: 358 LVADSLSP 381
+ DS SP
Sbjct: 88 VPLDSSSP 95
>04_01_0280 - 3757107-3758180
Length = 357
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -2
Query: 153 RKTTKRWEWIPVRAREKAARNINFTIYFLGCLWILLRSRVCFSLW 19
+K T RW+ P E+A + T+ + W L+ R+C + +
Sbjct: 74 KKETVRWKLFPFSLHERAKQWYTSTVGCVNSDWEKLQDRLCLAFF 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,963,603
Number of Sequences: 37544
Number of extensions: 545733
Number of successful extensions: 1628
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -