Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a05
(756 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001585-1|AAN71340.1| 411|Drosophila melanogaster RE26090p pro... 86 4e-17
AE013599-2824|AAM68437.1| 411|Drosophila melanogaster CG15111-P... 86 4e-17
AE013599-2823|AAF57599.2| 393|Drosophila melanogaster CG15111-P... 86 4e-17
BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p pro... 33 0.42
AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-P... 33 0.42
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA... 33 0.42
AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p pro... 33 0.56
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 33 0.56
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 33 0.56
AE014298-120|AAF45561.2| 311|Drosophila melanogaster CG14632-PA... 30 3.0
AE014298-119|AAN09032.1| 402|Drosophila melanogaster CG14632-PB... 30 3.0
BT006332-1|AAP20828.1| 1054|Drosophila melanogaster LD18775p pro... 29 6.8
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 29 6.8
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 6.8
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 6.8
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 6.8
AE014298-1398|AAN09623.1| 1100|Drosophila melanogaster CG2990-PB... 29 6.8
AE014298-1397|AAF46543.1| 1119|Drosophila melanogaster CG2990-PA... 29 6.8
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 6.8
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 6.8
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 6.8
>BT001585-1|AAN71340.1| 411|Drosophila melanogaster RE26090p
protein.
Length = 411
Score = 86.2 bits (204), Expect = 4e-17
Identities = 50/153 (32%), Positives = 75/153 (49%)
Frame = -1
Query: 531 LGTAVAANFVSNLEELCQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPYFK 352
LGT VA + LC + S + R P ++LE+PF N++DEI HP +KL LP+F
Sbjct: 260 LGTGVATH-------LCAKLASLRERAPRGVILESPFTNIRDEIRMHPFAKLYKNLPWFN 312
Query: 351 NTFVKPFTDSPDYSFTTDEYLAVVPDLPILMLHSKGDRVVPYELAVKLQNKLVQSRKSSS 172
T +P + F +D ++ PI+++H++ D VVP+ L +L + R +S
Sbjct: 313 FTISQPMYTN-RLRFESDVHVLEFRQ-PIMIIHAEDDVVVPFNLGYRLYRIALDGRSRTS 370
Query: 171 APFTFQTFEREHSIGHNNLCEAKHFKSAITDFL 73
P F F GH LC A I F+
Sbjct: 371 GPVEFHRFGASRKYGHKYLCRAPELPGLIQKFV 403
Score = 43.2 bits (97), Expect = 4e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -1
Query: 738 LTAGVLVFQV--AVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLNI 568
L A +L+F + VLPL+FRY+ T QR ++F I +P+ L+ P S + RN I
Sbjct: 35 LQACLLIFFLIFVVLPLIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYI 93
>AE013599-2824|AAM68437.1| 411|Drosophila melanogaster CG15111-PB,
isoform B protein.
Length = 411
Score = 86.2 bits (204), Expect = 4e-17
Identities = 50/153 (32%), Positives = 75/153 (49%)
Frame = -1
Query: 531 LGTAVAANFVSNLEELCQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPYFK 352
LGT VA + LC + S + R P ++LE+PF N++DEI HP +KL LP+F
Sbjct: 260 LGTGVATH-------LCAKLASLRERAPRGVILESPFTNIRDEIRMHPFAKLYKNLPWFN 312
Query: 351 NTFVKPFTDSPDYSFTTDEYLAVVPDLPILMLHSKGDRVVPYELAVKLQNKLVQSRKSSS 172
T +P + F +D ++ PI+++H++ D VVP+ L +L + R +S
Sbjct: 313 FTISQPMYTN-RLRFESDVHVLEFRQ-PIMIIHAEDDVVVPFNLGYRLYRIALDGRSRTS 370
Query: 171 APFTFQTFEREHSIGHNNLCEAKHFKSAITDFL 73
P F F GH LC A I F+
Sbjct: 371 GPVEFHRFGASRKYGHKYLCRAPELPGLIQKFV 403
Score = 43.2 bits (97), Expect = 4e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -1
Query: 738 LTAGVLVFQV--AVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLNI 568
L A +L+F + VLPL+FRY+ T QR ++F I +P+ L+ P S + RN I
Sbjct: 35 LQACLLIFFLIFVVLPLIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYI 93
>AE013599-2823|AAF57599.2| 393|Drosophila melanogaster CG15111-PA,
isoform A protein.
Length = 393
Score = 86.2 bits (204), Expect = 4e-17
Identities = 50/153 (32%), Positives = 75/153 (49%)
Frame = -1
Query: 531 LGTAVAANFVSNLEELCQERGSEKLRLPDALVLEAPFNNLKDEIAKHPLSKLVSWLPYFK 352
LGT VA + LC + S + R P ++LE+PF N++DEI HP +KL LP+F
Sbjct: 242 LGTGVATH-------LCAKLASLRERAPRGVILESPFTNIRDEIRMHPFAKLYKNLPWFN 294
Query: 351 NTFVKPFTDSPDYSFTTDEYLAVVPDLPILMLHSKGDRVVPYELAVKLQNKLVQSRKSSS 172
T +P + F +D ++ PI+++H++ D VVP+ L +L + R +S
Sbjct: 295 FTISQPMYTN-RLRFESDVHVLEFRQ-PIMIIHAEDDVVVPFNLGYRLYRIALDGRSRTS 352
Query: 171 APFTFQTFEREHSIGHNNLCEAKHFKSAITDFL 73
P F F GH LC A I F+
Sbjct: 353 GPVEFHRFGASRKYGHKYLCRAPELPGLIQKFV 385
Score = 43.2 bits (97), Expect = 4e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -1
Query: 738 LTAGVLVFQV--AVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLNI 568
L A +L+F + VLPL+FRY+ T QR ++F I +P+ L+ P S + RN I
Sbjct: 17 LQACLLIFFLIFVVLPLIFRYSVTFQRGILFLTFIKYPKGLDLTKPESVGLYATRNFYI 75
>BT024279-1|ABC86341.1| 1108|Drosophila melanogaster IP14124p
protein.
Length = 1108
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -1
Query: 411 KDEIAKHPLSKLVSWLPYFKNTFVKPFTDSPDYSFTTDEYLAVVPDLPILMLHSKG 244
KD I + +SWL ++K + ++ Y+ + ++++ VV DLP+ LH+ G
Sbjct: 108 KDYILCQDIGHQLSWLTWYKEDLHEGYS----YACSVEDFIEVVKDLPLEDLHTNG 159
>AE014296-2211|AAF49869.1| 1371|Drosophila melanogaster CG14120-PA
protein.
Length = 1371
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -1
Query: 411 KDEIAKHPLSKLVSWLPYFKNTFVKPFTDSPDYSFTTDEYLAVVPDLPILMLHSKG 244
KD I + +SWL ++K + ++ Y+ + ++++ VV DLP+ LH+ G
Sbjct: 371 KDYILCQDIGHQLSWLTWYKEDLHEGYS----YACSVEDFIEVVKDLPLEDLHTNG 422
>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
protein.
Length = 3396
Score = 33.1 bits (72), Expect = 0.42
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 89 ADLKCFASHRLL*P--MLCSLSKV*KVNGALEDFLDCTNLFCNLTANS*GTTLSPFECSI 262
A ++CF ++L+ M CS ++ + ED +C++ C+LT T F C
Sbjct: 595 ARVQCFKGYKLIGSNIMRCSEAQKFEQPPTCEDINECSSSQCDLTTTECQNTNGSFHCQC 654
Query: 263 KIGRSGTT 286
+ G + TT
Sbjct: 655 RTGFTATT 662
>AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p
protein.
Length = 527
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 204 SVT*PPTHRERLCPLSNVASKSEGPEPRRDTHQS*TNSRENR 329
S+T PP +R RL +N ++ P RD + TN+RE R
Sbjct: 365 SLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNTREGR 406
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 204 SVT*PPTHRERLCPLSNVASKSEGPEPRRDTHQS*TNSRENR 329
S+T PP +R RL +N ++ P RD + TN+RE R
Sbjct: 798 SLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNTREGR 839
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 32.7 bits (71), Expect = 0.56
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 204 SVT*PPTHRERLCPLSNVASKSEGPEPRRDTHQS*TNSRENR 329
S+T PP +R RL +N ++ P RD + TN+RE R
Sbjct: 798 SLTPPPMNRSRLGGGNNRKGRNRSPRHERDNNSGSTNTREGR 839
>AE014298-120|AAF45561.2| 311|Drosophila melanogaster CG14632-PA,
isoform A protein.
Length = 311
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 651 RIPLSSGPFYCIGTSGAARQLGIPGRRPSAKR 746
+IPL+ G F GT+ A+ +G+P P++ R
Sbjct: 164 QIPLAQGRFTASGTTAASGAIGLPASTPNSPR 195
>AE014298-119|AAN09032.1| 402|Drosophila melanogaster CG14632-PB,
isoform B protein.
Length = 402
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 651 RIPLSSGPFYCIGTSGAARQLGIPGRRPSAKR 746
+IPL+ G F GT+ A+ +G+P P++ R
Sbjct: 164 QIPLAQGRFTASGTTAASGAIGLPASTPNSPR 195
>BT006332-1|AAP20828.1| 1054|Drosophila melanogaster LD18775p protein.
Length = 1054
Score = 29.1 bits (62), Expect = 6.8
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Frame = -1
Query: 708 AVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLNIEFRSIVDNFL-IR 532
AVL L +R NKT+ R +N + + +L S L E V L
Sbjct: 829 AVLSLQYRMNKTITR---LANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTH 885
Query: 531 LGTAVAANFVSNLEELCQERGSEKLRLPDAL-VLEAPFNNLKDEIAKHPLSKLVS 370
L AV + E CQE RL D +E F+ KDEI K K VS
Sbjct: 886 LEQAVTLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVS 940
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 779 SGGESADGSRPGTPLCDERPEV 800
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 1257 SGGESADGSRPGTPLCDERPEV 1278
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 1263 SGGESADGSRPGTPLCDERPEV 1284
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 1206 SGGESADGSRPGTPLCDERPEV 1227
>AE014298-1398|AAN09623.1| 1100|Drosophila melanogaster CG2990-PB,
isoform B protein.
Length = 1100
Score = 29.1 bits (62), Expect = 6.8
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Frame = -1
Query: 708 AVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLNIEFRSIVDNFL-IR 532
AVL L +R NKT+ R +N + + +L S L E V L
Sbjct: 829 AVLSLQYRMNKTITR---LANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTH 885
Query: 531 LGTAVAANFVSNLEELCQERGSEKLRLPDAL-VLEAPFNNLKDEIAKHPLSKLVS 370
L AV + E CQE RL D +E F+ KDEI K K VS
Sbjct: 886 LEQAVTLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVS 940
>AE014298-1397|AAF46543.1| 1119|Drosophila melanogaster CG2990-PA,
isoform A protein.
Length = 1119
Score = 29.1 bits (62), Expect = 6.8
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Frame = -1
Query: 708 AVLPLMFRYNKTVQRKVVFSNCINFPRNLNYDSPSSCSVTCGRNLNIEFRSIVDNFL-IR 532
AVL L +R NKT+ R +N + + +L S L E V L
Sbjct: 848 AVLSLQYRMNKTITR---LANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTH 904
Query: 531 LGTAVAANFVSNLEELCQERGSEKLRLPDAL-VLEAPFNNLKDEIAKHPLSKLVS 370
L AV + E CQE RL D +E F+ KDEI K K VS
Sbjct: 905 LEQAVTLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVS 959
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 1206 SGGESADGSRPGTPLCDERPEV 1227
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 1263 SGGESADGSRPGTPLCDERPEV 1284
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 754 SDGRFADGRRPGIPSCRAAPDV 689
S G ADG RPG P C P+V
Sbjct: 1263 SGGESADGSRPGTPLCDERPEV 1284
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,415,857
Number of Sequences: 53049
Number of extensions: 679386
Number of successful extensions: 2150
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2147
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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