Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a05
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 29 0.047
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.1
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.1
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.1
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 3.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.4
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 7.1
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 29.1 bits (62), Expect = 0.047
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 378 LVSWLPYFKNTFVKPFTDSPD 316
+V WLP+F V+PF +PD
Sbjct: 382 IVCWLPFFVLALVRPFLKNPD 402
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 52 NEREYRKYGETSKERSRNRTEREKSKEPKII 82
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 52 NEREYRKYGETSKERSRNRTEREKSKEPKII 82
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 52 NEREYRKYGETSKERSRNRTEREKSKEPKII 82
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 52 NEREYRKYGETSKERSRNRTEREKSKEPKII 82
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 285 NEREYRKYGETSKERSRNRTEREKSKEPKII 315
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 285 NEREYRKYGETSKERSRNRTEREKSKEPKII 315
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 285 NEREYRKYGETSKERSRNRTEREKSKEPKII 315
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 285 NEREYRKYGETSKERSRNRTEREKSKEPKII 315
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 285 NEREYRKYGETSKERSRNRTEREKSKEPKII 315
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 95 NQQSRTSYGS*KKEKKLNKTNSAANKYKQII 3
N++ YG KE+ N+T +K +II
Sbjct: 274 NEREYRKYGETSKERSRNRTEREKSKEPKII 304
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 342 VKPFTDSPDYSFTTDE 295
+K +D+ DYS TTDE
Sbjct: 224 IKHESDNSDYSHTTDE 239
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 654 IPLSSGPFYCIGTSGAARQLGI 719
+P S+GP C+G A +L I
Sbjct: 479 VPFSAGPRSCVGRKYAMLKLKI 500
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 321 PDYSFTTDEYLAVVPDLPILMLH 253
P+ DE+ +V P P+L+LH
Sbjct: 868 PNLVEVLDEFPSVRPFAPLLLLH 890
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,433
Number of Sequences: 438
Number of extensions: 4823
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -