Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte14a02
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    29   0.16 
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    25   2.6  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   6.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   7.9  

>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 351 KRTYEALKEITLLFDTLKDSDRMPPP 274
           K TY+ALKE+T L   + ++ RM PP
Sbjct: 350 KITYDALKEMTYLDQVINETLRMYPP 375


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 626 NXCKKNVYQQCV 591
           N C++N YQQC+
Sbjct: 164 NTCRRNCYQQCI 175


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 399 ENDVQCTVTETFVK-TYKRTYEALKEITLLFDTLKDSDRMPPP 274
           E   QC V E   K   + TY+A+ ++  L   LK+S R  PP
Sbjct: 327 EKGRQC-VQEVLAKHNGEMTYDAIHDMKYLDQILKESLRKYPP 368


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 519  QMFHILYVSLDAYLDGFSIPDHRDTIH 439
            QMFH + V    +LDGF +      +H
Sbjct: 920  QMFHNIIVFRSLFLDGFKMYARLHLLH 946


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 519  QMFHILYVSLDAYLDGFSIPDHRDTIH 439
            QMFH + V    +LDGF +      +H
Sbjct: 921  QMFHNIIVFRSLFLDGFKMYARLHLLH 947


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -1

Query: 567  CQLDYSKQETSVVHQEQMFHILYVSLDAYLDGFSI-PDHRDTIHQMNLLEGNCIDNSEND 391
            C L   + + S++ + +   +LY S    +DGF   P  R    +    E    +  +N 
Sbjct: 1414 CDLQRQRTQQSIIERSRQNDMLYQSSKNAVDGFCYSPSDRQCAEEREQAEQR-FERQKNH 1472

Query: 390  VQCTVTE 370
             + T+ +
Sbjct: 1473 TKDTIRQ 1479


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 486 AYLDGFSIPDHRDTIHQMNLLEGNCIDNSE 397
           A ++G  I  + D I  + L+EGNC+D+ E
Sbjct: 627 AMVEGARIIGYADDI--VLLVEGNCVDDIE 654


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,781
Number of Sequences: 2352
Number of extensions: 15462
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)