Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte14a02
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66526-1|CAA91433.1| 375|Homo sapiens pancreatic polypeptide re... 31 4.6
U42387-1|AAB07759.1| 375|Homo sapiens pancreatic polypeptide re... 31 4.6
U35232-1|AAC50280.1| 375|Homo sapiens neuropeptide Y4 receptor ... 31 4.6
CR541950-1|CAG46748.1| 375|Homo sapiens PPYR1 protein. 31 4.6
BC096238-1|AAH96238.1| 375|Homo sapiens pancreatic polypeptide ... 31 4.6
AY649986-1|AAV68197.1| 375|Homo sapiens pancreatic polypeptide ... 31 4.6
AY649985-1|AAV68196.1| 375|Homo sapiens pancreatic polypeptide ... 31 4.6
AY268432-1|AAP23199.1| 375|Homo sapiens pancreatic polypeptide ... 31 4.6
AL390716-1|CAI13318.1| 375|Homo sapiens pancreatic polypeptide ... 31 4.6
BC099637-1|AAH99637.1| 375|Homo sapiens pancreatic polypeptide ... 30 8.0
>Z66526-1|CAA91433.1| 375|Homo sapiens pancreatic polypeptide
receptor PP1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>U42387-1|AAB07759.1| 375|Homo sapiens pancreatic polypeptide
receptor protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>U35232-1|AAC50280.1| 375|Homo sapiens neuropeptide Y4 receptor
protein protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>CR541950-1|CAG46748.1| 375|Homo sapiens PPYR1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>BC096238-1|AAH96238.1| 375|Homo sapiens pancreatic polypeptide
receptor 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>AY649986-1|AAV68197.1| 375|Homo sapiens pancreatic polypeptide
receptor 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>AY649985-1|AAV68196.1| 375|Homo sapiens pancreatic polypeptide
receptor 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>AY268432-1|AAP23199.1| 375|Homo sapiens pancreatic polypeptide
receptor 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>AL390716-1|CAI13318.1| 375|Homo sapiens pancreatic polypeptide
receptor 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 4.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAVLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
>BC099637-1|AAH99637.1| 375|Homo sapiens pancreatic polypeptide
receptor 1 protein.
Length = 375
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 391 IIF*IIYTISFKQIHLMNSIPVIWNAESIQICI*RYIQNVKHLFLMNNTCL 543
++ + + + + +H+ NS+ W+ E+I IC I V HL M +TC+
Sbjct: 268 VVMVVAFAMLWLPLHVFNSLED-WHHEAIPICHGNLIFLVCHLLAMASTCV 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,981,449
Number of Sequences: 237096
Number of extensions: 2132920
Number of successful extensions: 4087
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4087
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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