Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13p23
(871 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X60155-1|CAB51740.1| 779|Homo sapiens zinc finger 41 protein. 33 1.0
M92443-1|AAA61312.1| 542|Homo sapiens zinc finger protein 41 pr... 33 1.0
BC121054-1|AAI21055.1| 744|Homo sapiens zinc finger protein 366... 33 1.0
BC121053-1|AAI21054.1| 744|Homo sapiens zinc finger protein 366... 33 1.0
BC015023-1|AAH15023.1| 779|Homo sapiens zinc finger protein 41 ... 33 1.0
AL590283-1|CAI41627.1| 779|Homo sapiens zinc finger protein 41 ... 33 1.0
AL590223-1|CAI41591.1| 779|Homo sapiens zinc finger protein 41 ... 33 1.0
AK097115-1|BAC04954.1| 744|Homo sapiens protein ( Homo sapiens ... 33 1.0
AB209520-1|BAD92757.1| 698|Homo sapiens zinc finger protein 41 ... 33 1.0
BC004992-1|AAH04992.1| 478|Homo sapiens zinc finger protein 577... 32 2.3
AY279347-1|AAQ62844.1| 697|Homo sapiens zinc finger protein 434... 31 5.4
AY261676-1|AAP57398.1| 485|Homo sapiens zinc finger protein pro... 31 5.4
AK000424-1|BAA91155.1| 216|Homo sapiens protein ( Homo sapiens ... 31 5.4
BC058040-1|AAH58040.1| 386|Homo sapiens ZNF557 protein protein. 31 7.2
BC031208-1|AAH31208.1| 404|Homo sapiens ZNF557 protein protein. 31 7.2
BC003020-1|AAH03020.1| 375|Homo sapiens ZNF557 protein protein. 31 7.2
AK095524-1|BAC04567.1| 359|Homo sapiens protein ( Homo sapiens ... 31 7.2
CR542112-1|CAG46909.1| 302|Homo sapiens KLF7 protein. 30 9.5
BX537890-1|CAD97885.1| 269|Homo sapiens hypothetical protein pr... 30 9.5
BC007307-1|AAH07307.1| 637|Homo sapiens Similar to zinc finger ... 30 9.5
AF165097-1|AAD48448.1| 487|Homo sapiens FANCC-interacting prote... 30 9.5
AF130255-1|AAD27708.1| 487|Homo sapiens testis zinc finger prot... 30 9.5
AF028840-1|AAB86475.1| 447|Homo sapiens Kruppel-associated box ... 30 9.5
AC008062-1|AAX88867.1| 268|Homo sapiens unknown protein. 30 9.5
AB015132-1|BAA33521.1| 302|Homo sapiens ubiquitous Kruppel like... 30 9.5
>X60155-1|CAB51740.1| 779|Homo sapiens zinc finger 41 protein.
Length = 779
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S C + ++RSDL RHL+
Sbjct: 347 KIHTGQKPYKCSECGKAFFQRSDLFRHLR 375
>M92443-1|AAA61312.1| 542|Homo sapiens zinc finger protein 41
protein.
Length = 542
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S C + ++RSDL RHL+
Sbjct: 110 KIHTGQKPYKCSECGKAFFQRSDLFRHLR 138
>BC121054-1|AAI21055.1| 744|Homo sapiens zinc finger protein 366
protein.
Length = 744
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
H+D+ PF +CP K + +LTRH+K
Sbjct: 527 HSDSKPFKCLYCPSKFTLKGNLTRHMK 553
>BC121053-1|AAI21054.1| 744|Homo sapiens zinc finger protein 366
protein.
Length = 744
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
H+D+ PF +CP K + +LTRH+K
Sbjct: 527 HSDSKPFKCLYCPSKFTLKGNLTRHMK 553
>BC015023-1|AAH15023.1| 779|Homo sapiens zinc finger protein 41
protein.
Length = 779
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S C + ++RSDL RHL+
Sbjct: 347 KIHTGQKPYKCSECGKAFFQRSDLFRHLR 375
>AL590283-1|CAI41627.1| 779|Homo sapiens zinc finger protein 41
protein.
Length = 779
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S C + ++RSDL RHL+
Sbjct: 347 KIHTGQKPYKCSECGKAFFQRSDLFRHLR 375
>AL590223-1|CAI41591.1| 779|Homo sapiens zinc finger protein 41
protein.
Length = 779
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S C + ++RSDL RHL+
Sbjct: 347 KIHTGQKPYKCSECGKAFFQRSDLFRHLR 375
>AK097115-1|BAC04954.1| 744|Homo sapiens protein ( Homo sapiens
cDNA FLJ39796 fis, clone SPLEN2005429, moderately
similar to Fugu rubripes zinc finger protein. ).
Length = 744
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
H+D+ PF +CP K + +LTRH+K
Sbjct: 527 HSDSKPFKCLYCPSKFTLKGNLTRHMK 553
>AB209520-1|BAD92757.1| 698|Homo sapiens zinc finger protein 41
variant protein.
Length = 698
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S C + ++RSDL RHL+
Sbjct: 266 KIHTGQKPYKCSECGKAFFQRSDLFRHLR 294
>BC004992-1|AAH04992.1| 478|Homo sapiens zinc finger protein 577
protein.
Length = 478
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRH 786
+ HT P+ S C R Y +SDLTRH
Sbjct: 283 RLHTGDKPYKCSDCGRTFYFKSDLTRH 309
>AY279347-1|AAQ62844.1| 697|Homo sapiens zinc finger protein 434
protein.
Length = 697
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRH 786
K HT P+ SHC R + S LTRH
Sbjct: 653 KTHTGEKPYRCSHCERGFTKNSALTRH 679
>AY261676-1|AAP57398.1| 485|Homo sapiens zinc finger protein
protein.
Length = 485
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRH 786
K HT P+ SHC R + S LTRH
Sbjct: 441 KTHTGEKPYRCSHCERGFTKNSALTRH 467
>AK000424-1|BAA91155.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ20417 fis, clone KAT02301. ).
Length = 216
Score = 31.1 bits (67), Expect = 5.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRH 786
K HT P+ SHC R + S LTRH
Sbjct: 172 KTHTGEKPYRCSHCERGFTKNSALTRH 198
>BC058040-1|AAH58040.1| 386|Homo sapiens ZNF557 protein protein.
Length = 386
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y HT P+ C R RRS+LT+H++
Sbjct: 311 YSIHTGEYPYECHDCGRTFRRRSNLTQHIR 340
>BC031208-1|AAH31208.1| 404|Homo sapiens ZNF557 protein protein.
Length = 404
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y HT P+ C R RRS+LT+H++
Sbjct: 311 YSIHTGEYPYECRDCGRTFRRRSNLTQHIR 340
>BC003020-1|AAH03020.1| 375|Homo sapiens ZNF557 protein protein.
Length = 375
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y HT P+ C R RRS+LT+H++
Sbjct: 311 YSIHTGEYPYECHDCGRTFRRRSNLTQHIR 340
>AK095524-1|BAC04567.1| 359|Homo sapiens protein ( Homo sapiens
cDNA FLJ38205 fis, clone FCBBF1000437, moderately
similar to ZINC FINGER PROTEIN 33A. ).
Length = 359
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y HT P+ C R RRS+LT+H++
Sbjct: 240 YSIHTGEYPYECHDCGRTFRRRSNLTQHIR 269
>CR542112-1|CAG46909.1| 302|Homo sapiens KLF7 protein.
Length = 302
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y+ HT PF +HC R R L H+K
Sbjct: 270 YRKHTGAKPFKCNHCDRCFSRSDHLALHMK 299
>BX537890-1|CAD97885.1| 269|Homo sapiens hypothetical protein
protein.
Length = 269
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y+ HT PF +HC R R L H+K
Sbjct: 237 YRKHTGAKPFKCNHCDRCFSRSDHLALHMK 266
>BC007307-1|AAH07307.1| 637|Homo sapiens Similar to zinc finger
protein 268 protein.
Length = 637
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRH 786
K HT P+ + C R R+S LTRH
Sbjct: 42 KIHTGEKPYKCNECSRTFSRKSSLTRH 68
>AF165097-1|AAD48448.1| 487|Homo sapiens FANCC-interacting protein
protein.
Length = 487
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y+ HT PF S CP++ S +T+HL+
Sbjct: 392 YRVHTGEKPFSCSLCPQRSRDFSAMTKHLR 421
>AF130255-1|AAD27708.1| 487|Homo sapiens testis zinc finger protein
protein.
Length = 487
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y+ HT PF S CP++ S +T+HL+
Sbjct: 392 YRVHTGEKPFSCSLCPQRSRDFSAMTKHLR 421
>AF028840-1|AAB86475.1| 447|Homo sapiens Kruppel-associated box
protein protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
KYHTD + C + +R SDL H K
Sbjct: 157 KYHTDEKTYKCEKCGKGFFRSSDLQHHQK 185
>AC008062-1|AAX88867.1| 268|Homo sapiens unknown protein.
Length = 268
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y+ HT PF +HC R R L H+K
Sbjct: 236 YRKHTGAKPFKCNHCDRCFSRSDHLALHMK 265
>AB015132-1|BAA33521.1| 302|Homo sapiens ubiquitous Kruppel like
factor protein.
Length = 302
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
Y+ HT PF +HC R R L H+K
Sbjct: 270 YRKHTGAKPFKCNHCDRCFSRSDHLALHMK 299
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,632,760
Number of Sequences: 237096
Number of extensions: 1864303
Number of successful extensions: 8143
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8143
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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