Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13p23
(871 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030442-1|ABP87884.1| 820|Drosophila melanogaster FI01201p pro... 32 0.89
BT011491-1|AAR99149.1| 820|Drosophila melanogaster GM05638p pro... 32 0.89
AJ133756-1|CAB51359.1| 820|Drosophila melanogaster jim zinc fin... 32 0.89
AE014296-3720|AAX52769.1| 820|Drosophila melanogaster CG11352-P... 32 0.89
AE014296-3719|AAF51862.1| 820|Drosophila melanogaster CG11352-P... 32 0.89
AE014296-3718|AAN12203.1| 820|Drosophila melanogaster CG11352-P... 32 0.89
BT024238-1|ABC86300.1| 385|Drosophila melanogaster LD04512p pro... 31 2.1
AE014297-2780|AAF55756.1| 556|Drosophila melanogaster CG4360-PA... 31 2.1
U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription ... 31 2.7
L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger pr... 31 2.7
AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC... 31 2.7
AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB... 31 2.7
AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA... 31 2.7
AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD... 31 2.7
AE014298-1976|AAF48332.1| 802|Drosophila melanogaster CG11071-P... 30 3.6
AE014134-1179|AAF52446.2| 746|Drosophila melanogaster CG31632-P... 30 3.6
X03414-1|CAA27148.1| 466|Drosophila melanogaster Kr polypeptide... 30 4.8
BT023706-1|AAY85106.1| 541|Drosophila melanogaster IP01347p pro... 30 4.8
BT022164-1|AAY51558.1| 541|Drosophila melanogaster IP01345p pro... 30 4.8
BT022143-1|AAY51538.1| 474|Drosophila melanogaster IP01468p pro... 30 4.8
AY071280-1|AAL48902.1| 501|Drosophila melanogaster RE30918p pro... 30 4.8
AF212313-1|AAF32281.1| 541|Drosophila melanogaster senseless pr... 30 4.8
AF212312-1|AAF32280.1| 541|Drosophila melanogaster senseless pr... 30 4.8
AE014297-1521|AAF54813.1| 501|Drosophila melanogaster CG5245-PA... 30 4.8
AE014296-2268|AAN11834.1| 541|Drosophila melanogaster CG32120-P... 30 4.8
AE013599-4029|AAF47321.1| 502|Drosophila melanogaster CG3340-PA... 30 4.8
U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger nu... 29 6.3
AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p pro... 29 6.3
AY051819-1|AAK93243.1| 346|Drosophila melanogaster LD32747p pro... 29 6.3
AL031227-3|CAA20227.1| 1891|Drosophila melanogaster EG:66A1.1,FB... 29 6.3
AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB... 29 6.3
AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA... 29 6.3
AE014134-750|AAF51003.2| 346|Drosophila melanogaster CG15436-PA... 29 6.3
AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p pro... 29 8.3
AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA pr... 29 8.3
AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA p... 29 8.3
AE014297-4188|AAF56753.2| 397|Drosophila melanogaster CG5540-PA... 29 8.3
AE014296-3085|AAF49207.3| 322|Drosophila melanogaster CG18223-P... 29 8.3
AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-P... 29 8.3
AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-P... 29 8.3
AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-P... 29 8.3
>BT030442-1|ABP87884.1| 820|Drosophila melanogaster FI01201p
protein.
Length = 820
Score = 32.3 bits (70), Expect = 0.89
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HTD PF S C ++ ++S LT+HL+
Sbjct: 349 RIHTDARPFPCSECGKRFRQQSHLTQHLR 377
>BT011491-1|AAR99149.1| 820|Drosophila melanogaster GM05638p
protein.
Length = 820
Score = 32.3 bits (70), Expect = 0.89
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HTD PF S C ++ ++S LT+HL+
Sbjct: 349 RIHTDARPFPCSECGKRFRQQSHLTQHLR 377
>AJ133756-1|CAB51359.1| 820|Drosophila melanogaster jim zinc finger
protein protein.
Length = 820
Score = 32.3 bits (70), Expect = 0.89
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HTD PF S C ++ ++S LT+HL+
Sbjct: 349 RIHTDARPFPCSECGKRFRQQSHLTQHLR 377
>AE014296-3720|AAX52769.1| 820|Drosophila melanogaster CG11352-PD,
isoform D protein.
Length = 820
Score = 32.3 bits (70), Expect = 0.89
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HTD PF S C ++ ++S LT+HL+
Sbjct: 349 RIHTDARPFPCSECGKRFRQQSHLTQHLR 377
>AE014296-3719|AAF51862.1| 820|Drosophila melanogaster CG11352-PC,
isoform C protein.
Length = 820
Score = 32.3 bits (70), Expect = 0.89
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HTD PF S C ++ ++S LT+HL+
Sbjct: 349 RIHTDARPFPCSECGKRFRQQSHLTQHLR 377
>AE014296-3718|AAN12203.1| 820|Drosophila melanogaster CG11352-PB,
isoform B protein.
Length = 820
Score = 32.3 bits (70), Expect = 0.89
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HTD PF S C ++ ++S LT+HL+
Sbjct: 349 RIHTDARPFPCSECGKRFRQQSHLTQHLR 377
>BT024238-1|ABC86300.1| 385|Drosophila melanogaster LD04512p
protein.
Length = 385
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HTD P+ HC + + S LT H+K
Sbjct: 162 KIHTDERPYKCKHCDKAFRQISTLTNHVK 190
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S+C + ++S LT HLK
Sbjct: 330 KIHTGDKPYTCSYCHMQFRQQSTLTNHLK 358
>AE014297-2780|AAF55756.1| 556|Drosophila melanogaster CG4360-PA
protein.
Length = 556
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HTD P+ HC + + S LT H+K
Sbjct: 162 KIHTDERPYKCKHCDKAFRQISTLTNHVK 190
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S+C + ++S LT HLK
Sbjct: 330 KIHTGDKPYTCSYCHMQFRQQSTLTNHLK 358
Score = 29.5 bits (63), Expect = 6.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
K HT P+ S CP++ ++S L HL+
Sbjct: 524 KIHTGEKPYNCSFCPKQFRQKSTLQNHLR 552
>U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription
factor protein.
Length = 2527
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HTD PF SHC + +LT+H++
Sbjct: 1788 HTDVRPFTCSHCNFSFKTKGNLTKHMQ 1814
>L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger protein
protein.
Length = 2529
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HTD PF SHC + +LT+H++
Sbjct: 1792 HTDVRPFTCSHCNFSFKTKGNLTKHMQ 1818
>AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC,
isoform C protein.
Length = 2532
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HTD PF SHC + +LT+H++
Sbjct: 1793 HTDVRPFTCSHCNFSFKTKGNLTKHMQ 1819
>AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB,
isoform B protein.
Length = 2532
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HTD PF SHC + +LT+H++
Sbjct: 1793 HTDVRPFTCSHCNFSFKTKGNLTKHMQ 1819
>AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA,
isoform A protein.
Length = 2532
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HTD PF SHC + +LT+H++
Sbjct: 1793 HTDVRPFTCSHCNFSFKTKGNLTKHMQ 1819
>AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD,
isoform D protein.
Length = 2577
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HTD PF SHC + +LT+H++
Sbjct: 1838 HTDVRPFTCSHCNFSFKTKGNLTKHMQ 1864
>AE014298-1976|AAF48332.1| 802|Drosophila melanogaster CG11071-PA
protein.
Length = 802
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HT PF+ C R +SDLTRHL+
Sbjct: 740 HTGERPFVCLFCGRAFGGKSDLTRHLR 766
>AE014134-1179|AAF52446.2| 746|Drosophila melanogaster CG31632-PA
protein.
Length = 746
Score = 30.3 bits (65), Expect = 3.6
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRH 786
H+DT P+ ++C ++ +++SD+ +H
Sbjct: 586 HSDTRPYPCNYCGKRFHQKSDMKKH 610
>X03414-1|CAA27148.1| 466|Drosophila melanogaster Kr polypeptide
protein.
Length = 466
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HT P+ SHC R+ + ++L RHL+
Sbjct: 270 RLHTGEKPYHCSHCDRQFVQVANLRRHLR 298
>BT023706-1|AAY85106.1| 541|Drosophila melanogaster IP01347p
protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRH 786
H+DT P+ +C ++ +++SD+ +H
Sbjct: 435 HSDTRPYPCQYCGKRFHQKSDMKKH 459
>BT022164-1|AAY51558.1| 541|Drosophila melanogaster IP01345p
protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRH 786
H+DT P+ +C ++ +++SD+ +H
Sbjct: 435 HSDTRPYPCQYCGKRFHQKSDMKKH 459
>BT022143-1|AAY51538.1| 474|Drosophila melanogaster IP01468p
protein.
Length = 474
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HT P+ SHC + ++S L RHL+
Sbjct: 439 HTGEKPYKCSHCSTRYTQKSSLGRHLR 465
>AY071280-1|AAL48902.1| 501|Drosophila melanogaster RE30918p
protein.
Length = 501
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HT P+ SHC R+ + ++L RHL+
Sbjct: 269 RLHTGEKPYHCSHCDRQFVQVANLRRHLR 297
>AF212313-1|AAF32281.1| 541|Drosophila melanogaster senseless
protein protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRH 786
H+DT P+ +C ++ +++SD+ +H
Sbjct: 435 HSDTRPYPCQYCGKRFHQKSDMKKH 459
>AF212312-1|AAF32280.1| 541|Drosophila melanogaster senseless
protein protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRH 786
H+DT P+ +C ++ +++SD+ +H
Sbjct: 435 HSDTRPYPCQYCGKRFHQKSDMKKH 459
>AE014297-1521|AAF54813.1| 501|Drosophila melanogaster CG5245-PA
protein.
Length = 501
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HT P+ SHC + ++S L RHL+
Sbjct: 466 HTGEKPYKCSHCSTRYTQKSSLGRHLR 492
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHL 783
+ H + PF SHC + RR+ RHL
Sbjct: 102 RLHAEERPFECSHCSKSFGRRTHYKRHL 129
>AE014296-2268|AAN11834.1| 541|Drosophila melanogaster CG32120-PA
protein.
Length = 541
Score = 29.9 bits (64), Expect = 4.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRH 786
H+DT P+ +C ++ +++SD+ +H
Sbjct: 435 HSDTRPYPCQYCGKRFHQKSDMKKH 459
>AE013599-4029|AAF47321.1| 502|Drosophila melanogaster CG3340-PA
protein.
Length = 502
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+ HT P+ SHC R+ + ++L RHL+
Sbjct: 270 RLHTGEKPYHCSHCDRQFVQVANLRRHLR 298
>U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger nuclear
protein hindsightprotein.
Length = 1920
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHL 783
HT PF SHCP +S+ RHL
Sbjct: 1470 HTGQKPFKCSHCPLLFTTKSNCDRHL 1495
>AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p protein.
Length = 1893
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHL 783
HT PF SHCP +S+ RHL
Sbjct: 1473 HTGQKPFKCSHCPLLFTTKSNCDRHL 1498
>AY051819-1|AAK93243.1| 346|Drosophila melanogaster LD32747p
protein.
Length = 346
Score = 29.5 bits (63), Expect = 6.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HT PF S C + + SDL RH++
Sbjct: 204 HTGERPFKCSQCSKTFIKSSDLRRHIR 230
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRH 786
++ HT PF SHCP+ + L +H
Sbjct: 257 FRSHTGERPFKCSHCPKAFAMKQHLKQH 284
>AL031227-3|CAA20227.1| 1891|Drosophila melanogaster
EG:66A1.1,FBgn0003053;peb protein.
Length = 1891
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHL 783
HT PF SHCP +S+ RHL
Sbjct: 1470 HTGQKPFKCSHCPLLFTTKSNCDRHL 1495
>AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB,
isoform B protein.
Length = 1894
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHL 783
HT PF SHCP +S+ RHL
Sbjct: 1473 HTGQKPFKCSHCPLLFTTKSNCDRHL 1498
>AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA,
isoform A protein.
Length = 1894
Score = 29.5 bits (63), Expect = 6.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHL 783
HT PF SHCP +S+ RHL
Sbjct: 1473 HTGQKPFKCSHCPLLFTTKSNCDRHL 1498
>AE014134-750|AAF51003.2| 346|Drosophila melanogaster CG15436-PA
protein.
Length = 346
Score = 29.5 bits (63), Expect = 6.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 860 HTDTXPFMXSHCPRKVYRRSDLTRHLK 780
HT PF S C + + SDL RH++
Sbjct: 204 HTGERPFKCSQCSKTFIKSSDLRRHIR 230
Score = 29.1 bits (62), Expect = 8.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 869 YKYHTDTXPFMXSHCPRKVYRRSDLTRH 786
++ HT PF SHCP+ + L +H
Sbjct: 257 FRSHTGERPFKCSHCPKAFAMKQHLKQH 284
>AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p
protein.
Length = 878
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+YH++ PFM C + DLTRH K
Sbjct: 241 RYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
>AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA
protein.
Length = 891
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+YH++ PFM C + DLTRH K
Sbjct: 241 RYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
>AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA
protein.
Length = 962
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+YH++ PFM C + DLTRH K
Sbjct: 241 RYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
>AE014297-4188|AAF56753.2| 397|Drosophila melanogaster CG5540-PA
protein.
Length = 397
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 161 NIILQETSLTRLFLLISAFQGFTSLLKYCWNFASVRNVFF---WTKIFNTAYSQGRLIDI 331
N+I+ + R + + F F L+ C + + +FF WT + AY G ++
Sbjct: 250 NLIIDYAAAIRPAVTRTIFVQFL-LIGICLGLSMINLLFFADIWTGLATVAYINGLMVQT 308
Query: 332 VARCYIC 352
C++C
Sbjct: 309 FPFCFVC 315
>AE014296-3085|AAF49207.3| 322|Drosophila melanogaster CG18223-PA,
isoform A protein.
Length = 322
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 25 SLRVGATHCQSYFEYTNIYMHICSLVTLM*NNDIVFISFI--YLFST*HNIAGN 180
S RVG YTN+YMH+ + +M NN+ + + YLF+T I GN
Sbjct: 256 SYRVGCGSKTLPSIYTNVYMHMDWINGIMNNNEANRLCYSPNYLFTTIGIIIGN 309
>AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-PA,
isoform A protein.
Length = 962
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+YH++ PFM C + DLTRH K
Sbjct: 241 RYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
>AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-PB,
isoform B protein.
Length = 891
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+YH++ PFM C + DLTRH K
Sbjct: 241 RYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
>AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-PD,
isoform D protein.
Length = 878
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 866 KYHTDTXPFMXSHCPRKVYRRSDLTRHLK 780
+YH++ PFM C + DLTRH K
Sbjct: 241 RYHSERKPFMCQVCGQGFTTSQDLTRHGK 269
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,557,918
Number of Sequences: 53049
Number of extensions: 578467
Number of successful extensions: 1741
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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