Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13p14
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    30   0.008
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    30   0.008
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    28   0.024
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    27   0.055
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    27   0.073
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.13 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.17 
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   0.89 
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   0.89 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   1.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   2.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   2.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   2.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.8  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   4.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   6.3  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 29.9 bits (64), Expect = 0.008
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = -2

Query: 325 GRQMLIRERHFLFLLLIYVDCHIVGDKAHLTELKKICEHAYGCFHDTII--VCGKSVNEA 152
           GR       HF       + C  V DK+   +L  ICE  Y  F +  +  +C K+    
Sbjct: 33  GRSPAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQLHNLCRKNCFTT 92

Query: 151 RTFLDLCDLYEYSCEYSMVFRHVKEDDG 68
             F    D  + S E + +   +K+  G
Sbjct: 93  DYFKGCIDTLQRSDEEAQIQLWIKQIRG 120


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 29.9 bits (64), Expect = 0.008
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = -2

Query: 325 GRQMLIRERHFLFLLLIYVDCHIVGDKAHLTELKKICEHAYGCFHDTII--VCGKSVNEA 152
           GR       HF       + C  V DK+   +L  ICE  Y  F +  +  +C K+    
Sbjct: 33  GRSPAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQLHNLCRKNCFTT 92

Query: 151 RTFLDLCDLYEYSCEYSMVFRHVKEDDG 68
             F    D  + S E + +   +K+  G
Sbjct: 93  DYFKGCIDTLQRSDEEAQIQLWIKQIRG 120


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 0.024
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 47  FLRVWTNSVIFFDVPENHAVFAGVFVQI 130
           F  +WT +VIF  + +N  VFAG+ V I
Sbjct: 116 FFLLWTPAVIFVVLSKNGIVFAGLIVFI 143


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 27.1 bits (57), Expect = 0.055
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = -2

Query: 325 GRQMLIRERHFLFLLLIYVDCHIVGDKAHLTELKKICEHAYGCFHD 188
           GR       HF       + C  V DK+   +L  ICE  Y  F +
Sbjct: 33  GRSPAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFRE 78


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 0.073
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 159 TKPVHFWTSAICTNTPANTAWFSGTSKKMTEFV 61
           T   ++W +  C N    T +F+  +KK+ +F+
Sbjct: 51  TNRKYYWLNVCCLNLSIVTIFFNFATKKLEQFI 83


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.8 bits (54), Expect = 0.13
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 202 GCFHDTIIVCGKSVNEARTFLDLCDLYEYSCEYSMVFRHVKE 77
           G     +I    +V EA+TF+D C  Y+   ++++ FR+  E
Sbjct: 681 GSLLQMVISMDSTVEEAKTFVDRC--YKMQEQFTLNFRNSDE 720


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 238 LTELKKICEHAYGCFHDTIIV 176
           L+ ++  C+  Y CFH T+++
Sbjct: 135 LSFIENYCQFLYNCFHSTLLL 155


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 78  SLTCLKTMLYSQEY 119
           +L CLKT + SQEY
Sbjct: 9   ALACLKTYVSSQEY 22


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 78  SLTCLKTMLYSQEY 119
           +L CLKT + SQEY
Sbjct: 9   ALACLKTYVSSQEY 22


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
 Frame = -2

Query: 250 DKAHLTELKKICEHAYGC-FHDTIIVCGKSVNEART----FLDLCDLY-EYSC-EYSMVF 92
           DK +    K+I E A+   + D I     +  E +T    F  + +L  +++C EY  VF
Sbjct: 226 DKEYRARRKEIAEIAFAYKYGDPIPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRVF 285

Query: 91  RHVKEDDGICPN 56
           + ++E+D   P+
Sbjct: 286 KMLQEEDIFTPD 297


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 179 YDRVVKTTVRMLAYFFKFCQV 241
           Y    K  +R L++F+K C +
Sbjct: 3   YFNYSKKDIRSLSFFYKICNI 23


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 179 YDRVVKTTVRMLAYFFKFCQV 241
           Y    K  +R L++F+K C +
Sbjct: 3   YFNYSKKDIRSLSFFYKICNI 23


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -2

Query: 121 EYSCEYSMVFRHVKED 74
           +YSCEY++V+  +KE+
Sbjct: 189 DYSCEYNLVW--IKEE 202


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 316 MLIRERHFLFLLLIYVDC 263
           +L+   + LFLL ++ DC
Sbjct: 285 LLVDSTYCLFLLFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 316 MLIRERHFLFLLLIYVDC 263
           +L+   + LFLL ++ DC
Sbjct: 285 LLVDSTYCLFLLFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 316 MLIRERHFLFLLLIYVDC 263
           +L+   + LFLL ++ DC
Sbjct: 285 LLVDSTYCLFLLFVFCDC 302


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 127 LYEYSCEYSMVFRHVKEDDGICPN 56
           +YE SC+YS V     E+  +  N
Sbjct: 36  IYEPSCQYSPVSNSDSENSEVSSN 59


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 14/62 (22%), Positives = 25/62 (40%)
 Frame = +2

Query: 86  VPENHAVFAGVFVQIAEVQKCTGFVNRFTTDYDRVVKTTVRMLAYFFKFCQVSFISNYMT 265
           VP +    A  +  + E+ K   F+N  T D+    + TV   +  F     +     +T
Sbjct: 680 VPASFEAIAAGY-DVPEISKYLDFINVMTYDFHGQWERTVGHNSPLFPLESATSYQKKLT 738

Query: 266 ID 271
           +D
Sbjct: 739 VD 740


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 188 VVKTTVRMLAYFFKFCQVSF 247
           VV   +  +AYFF F  + F
Sbjct: 57  VVSVLMDFIAYFFNFWTILF 76


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 168 NLLTKPVHFWTSAICTNTPANTAWFSGTSKKMTEFV 61
           N +T+PV FW       T + T+   G    M+E V
Sbjct: 70  NRITQPVLFWIHGGDFVTGSGTSEMYGPDYLMSENV 105


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 201 PYACSHIFLSSV 236
           PY C+HI  S V
Sbjct: 50  PYLCTHIIYSFV 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,624
Number of Sequences: 336
Number of extensions: 1807
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)