Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13p14
(347 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024208-1|AAF36054.2| 383|Caenorhabditis elegans Hypothetical ... 29 1.2
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical ... 27 2.8
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z48245-1|CAA88290.1| 356|Caenorhabditis elegans Hypothetical pr... 27 3.7
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 27 3.7
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 27 3.7
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 27 3.7
Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical ... 27 4.9
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 26 8.5
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 26 8.5
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 26 8.5
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 26 8.5
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 26 8.5
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 26 8.5
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 26 8.5
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 26 8.5
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 26 8.5
AF125446-3|AAD12804.1| 203|Caenorhabditis elegans Hypothetical ... 26 8.5
AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical ... 26 8.5
>AC024208-1|AAF36054.2| 383|Caenorhabditis elegans Hypothetical
protein Y75B7B.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 30 PTPGPNSLGFGQIPSSSLTCLKT--MLYSQEYSYKSQRSKNVR 152
P P N G+IPS S T LK + QE K + S+N R
Sbjct: 31 PRPKSNRTSSGKIPSKSSTPLKERGLTVEQEQQKKKKTSENTR 73
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = -2
Query: 256 VGDKAHLTELKKICEHAYGCFHDTIIVCG-----KSVNE-ARTFLDLCDLYEYSCEYSMV 95
+G +A L K+ CF + I CG + +NE ++T + LC + ++V
Sbjct: 50 IGTEARLLHTCKVYSSTLPCFQEKIRECGDDKQKRILNEVSKTIMYLCSPFSLK-RQNLV 108
Query: 94 FRHVKEDDGICPNPKELG 41
H K G+ P G
Sbjct: 109 IEHQKCISGVLSLPASTG 126
>AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical
protein C36C5.12 protein.
Length = 219
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -2
Query: 247 KAHLTELKKICEHAYGCFHDTIIVCGKSVNEARTFLDLCDLYEYSCEYSMVFRHVKEDDG 68
K+ L E KK C+ CF I CG N +L + E +CE ++V+ H ED
Sbjct: 79 KSELKEFKKTCDSLKNCF--AITRCGP--NSTMDEAELFRMVEKNCE-AVVYIH--EDFS 131
Query: 67 IC 62
C
Sbjct: 132 DC 133
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 238 LTELKKICEHAYGCFHDTIIVCGKSVNEARTFL 140
+T L I H + +HDTI+ ++N R L
Sbjct: 2488 ITLLNNIISHNFALYHDTIVAHDVAINMTRNTL 2520
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 295 FLFLLLIYVDCHIVGDKAHLTEL 227
FLF+LL+Y C +G K + E+
Sbjct: 833 FLFILLVYWRCQRIGKKLKIAEM 855
>Z48245-1|CAA88290.1| 356|Caenorhabditis elegans Hypothetical
protein T27D1.3 protein.
Length = 356
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 144 FWTSAICTNTPANTAWFSGTSKKMTEFV 61
F SA C+NT + W+ G K+TEF+
Sbjct: 176 FQLSATCSNTVGKSTWWQG--YKLTEFL 201
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 295 FLFLLLIYVDCHIVGDKAHLTEL 227
FLF+LL+Y C +G K + E+
Sbjct: 833 FLFILLVYWRCQRIGKKLKIAEM 855
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 295 FLFLLLIYVDCHIVGDKAHLTEL 227
FLF+LL+Y C +G K + E+
Sbjct: 884 FLFILLVYWRCQRIGKKLKIAEM 906
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 5 YPYIRLLLTHSRS*FLRVWTN--SVIFFDVPENHAVFAGVFVQIAEVQKC 148
YPY+RLLL + FL V + V+ F + F Q+ KC
Sbjct: 708 YPYLRLLLKYDPQQFLNVVSTCADVLLFQLDNRLQRFVDTIGQLCVNMKC 757
>Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical
protein ZK643.3b protein.
Length = 522
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 139 DLCDLYEYSCEYSMVFRHVKEDDGICP 59
D C Y C ++V H + DD CP
Sbjct: 121 DCCSAARYCCRNTLVKYHHRVDDSPCP 147
>Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical
protein ZK643.3a protein.
Length = 480
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 139 DLCDLYEYSCEYSMVFRHVKEDDGICP 59
D C Y C ++V H + DD CP
Sbjct: 121 DCCSAARYCCRNTLVKYHHRVDDSPCP 147
>AF100656-3|AAF99968.1| 265|Caenorhabditis elegans Hypothetical
protein F49F1.1 protein.
Length = 265
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = -2
Query: 271 VDCHIVGDKAHLTELKKICEHAYGCFHDTIIVCGKSVNEARTFLDLCDLYEYSCEYSMVF 92
+DC + T ++ C+ + G VCG T+ D CD+Y+ C
Sbjct: 23 IDCPRIVYYCDETYVQNQCQFSCGICKQDPGVCGD------TYFD-CDMYDTKCNSPSFQ 75
Query: 91 RHVKEDDGICPNPKE 47
R G+CP E
Sbjct: 76 RQCAGTCGLCPGACE 90
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical protein
ZK1151.1i protein.
Length = 1497
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 1096 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1133
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 856 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 893
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 938 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 975
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical protein
ZK1151.1i protein.
Length = 1497
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 1096 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1133
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 856 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 893
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 938 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 975
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 HFWTSAICTNTPANTAWFSGTSKKMTEFVQTLRN*DRE 34
HFW + P W S +KM E ++ L RE
Sbjct: 969 HFWNLLNASQKPPEPDWASQYDQKMAELLKKLEEAWRE 1006
>AF125446-3|AAD12804.1| 203|Caenorhabditis elegans Hypothetical
protein R05C11.1 protein.
Length = 203
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 325 GRQMLIRERHFLFLLLIYVDCHIVGDKAHLTELKKI 218
G ++ E+ F L+ +D + DKAH+TE ++I
Sbjct: 12 GDTEVVSEKTFKVFSLLNLDAPYLHDKAHVTEEEEI 47
>AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical
protein F19B10.5 protein.
Length = 313
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 24 F*PTPGPNSLGFGQIPSSSLTCLKTMLYSQEYSYKSQRSKNVRASLTDLPQTMIV 188
F P P PN L FG +P +L +Q + + + ++A + L Q IV
Sbjct: 41 FQPIPVPNQLYFGTLPYPPQAHGPGLLRAQNPEAQPDQLQQLQAKIQKLGQEAIV 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,330,648
Number of Sequences: 27780
Number of extensions: 164166
Number of successful extensions: 442
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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