Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13p07
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   0.94 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   6.6  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   8.7  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -2

Query: 706  DQFESDQEDQSAIDDETNELKSNVPQLSS 620
            D+  SD+ED    D E ++++++ P+LSS
Sbjct: 1724 DEGGSDKEDDDGDDGEDDDVENDDPELSS 1752



 Score = 25.0 bits (52), Expect = 2.9
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 394  NYSKKNIAVHHGPLSRSLRFKVPVDRTPAPNAYIVGGGIETILRSHNHRLKENTTSH 224
            N S  +  + HG +  S    VPVD+ P P      G I+T   S +H      TSH
Sbjct: 1013 NESSLSPNLWHGSIETSTDTLVPVDQYPPPL-----GPIDTSALSTHHEQNLLPTSH 1064


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 394  NYSKKNIAVHHGPLSRSLRFKVPVDRTPAPNAYIVGGGIETILRSHNHRLKENTTSH 224
            N S  +  + HG +  S    VPVD+ P P      G I+T   S +H      TSH
Sbjct: 1011 NESSLSPNLWHGSIETSTDTLVPVDQYPPPL-----GPIDTSALSTHHEQNLLPTSH 1062


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 727 SSASRFKDQFESDQEDQSAIDDETNELKSNVPQLSSNFKSKTVRFKPL 584
           ++A +  ++  +   +   + D    L + +    SN KSKT  F P+
Sbjct: 8   AAADQQANRLHAPTANTKKVSDSVTNLAAKIANALSNQKSKTEIFSPV 55


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 352 SRSLRFKVPVDRTPAP 305
           S  L FKVP+D  PAP
Sbjct: 287 SAPLAFKVPLDVLPAP 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,390
Number of Sequences: 2352
Number of extensions: 16596
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)