Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13p07
(839 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK090659-1|BAC03498.1| 249|Homo sapiens protein ( Homo sapiens ... 37 0.10
BC008496-1|AAH08496.1| 229|Homo sapiens coiled-coil domain cont... 33 1.7
AY598334-1|AAT06745.1| 229|Homo sapiens L15 protein. 33 1.7
AF382034-1|AAO13807.1| 105|Homo sapiens hypothetical protein RA... 33 1.7
AF155108-1|AAD42874.1| 241|Homo sapiens NY-REN-41 antigen protein. 33 1.7
AF031554-1|AAC51901.1| 632|Homo sapiens immunoglobulin-like tra... 32 3.0
AF009642-1|AAC51897.1| 632|Homo sapiens immunoglobulin-like tra... 32 3.0
AF009641-1|AAC51896.1| 632|Homo sapiens immunoglobulin-like tra... 32 3.0
AF009635-1|AAC51890.1| 632|Homo sapiens immunoglobulin-like tra... 32 3.0
BC063891-1|AAH63891.1| 242|Homo sapiens C1orf201 protein protein. 31 3.9
BC047705-1|AAH47705.1| 287|Homo sapiens chromosome 1 open readi... 31 3.9
AL031431-7|CAI21410.1| 287|Homo sapiens novel protein protein. 31 3.9
AL031431-6|CAI21411.1| 334|Homo sapiens novel protein protein. 31 3.9
EF560731-1|ABQ59041.1| 564|Homo sapiens KLHL7 protein protein. 31 5.2
BC039585-1|AAH39585.1| 586|Homo sapiens kelch-like 7 (Drosophil... 31 5.2
AY028802-1|AAK29099.1| 538|Homo sapiens kelch/BTB protein protein. 31 5.2
AK056390-1|BAB71175.1| 564|Homo sapiens protein ( Homo sapiens ... 31 5.2
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc... 31 6.9
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ... 31 6.9
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ... 31 6.9
BC017650-1|AAH17650.1| 192|Homo sapiens C1orf201 protein protein. 31 6.9
BC016987-1|AAH16987.1| 284|Homo sapiens FAM44A protein protein. 31 6.9
AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein. 31 6.9
AK023327-1|BAB14529.1| 155|Homo sapiens protein ( Homo sapiens ... 30 9.1
>AK090659-1|BAC03498.1| 249|Homo sapiens protein ( Homo sapiens
cDNA FLJ33340 fis, clone BRACE2001881. ).
Length = 249
Score = 36.7 bits (81), Expect = 0.10
Identities = 54/224 (24%), Positives = 83/224 (37%), Gaps = 15/224 (6%)
Frame = -2
Query: 820 KSRKDDGPCAATYSPKPISCNFTK--CTAVPFGSSASRFKDQFESDQEDQSAIDDETNEL 647
K+ K + P Y+ C CT F S R F D + +
Sbjct: 9 KALKFETPAPNYYNASVSCCKQRNNVCTRAGFMSKTQRGSFAFADKGPPPGHYDINESLV 68
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEP---SPADLGPVVNKMLYRSLPLQQMAPFFSSE 476
K + L S FKSKT R L P +P+D V K L+ P+ FS++
Sbjct: 69 KQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVPKKTLFPKNPILN----FSAQ 124
Query: 475 GRFMPWRNWISIFGNVKTPGPGYYDVTNY-----SKKNIAVHHGPLSRSLRFKVP-VDRT 314
+P + PGPG Y++ +Y + N+ G +S++ R D+
Sbjct: 125 PSPLPPKP--------PFPGPGQYEIVDYLGPCKQRNNVCTRAGFMSKTQRGSFAFADKG 176
Query: 313 PAPNAYIVGGGIETILRSHNHRL----KENTTSHQALFSKEPAP 194
P P Y + E++++ + L K T L S P P
Sbjct: 177 PPPGHYDIN---ESLVKQSPNTLMSCFKSKTNRGLKLTSTGPGP 217
>BC008496-1|AAH08496.1| 229|Homo sapiens coiled-coil domain
containing 34 protein.
Length = 229
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 778 PKPISC-NFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
P P+SC N T+ P G + +F D+ + D ED+ +DDE
Sbjct: 54 PLPLSCSNSTRSLLSPLGHQSFQF-DEDDGDGEDEEDVDDE 93
>AY598334-1|AAT06745.1| 229|Homo sapiens L15 protein.
Length = 229
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 778 PKPISC-NFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
P P+SC N T+ P G + +F D+ + D ED+ +DDE
Sbjct: 54 PLPLSCSNSTRSLLSPLGHQSFQF-DEDDGDGEDEEDVDDE 93
>AF382034-1|AAO13807.1| 105|Homo sapiens hypothetical protein RAMA3
protein.
Length = 105
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 778 PKPISC-NFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
P P+SC N T+ P G + +F D+ + D ED+ +DDE
Sbjct: 18 PLPLSCSNSTRSLLSPLGHQSFQF-DEDDGDGEDEEDVDDE 57
>AF155108-1|AAD42874.1| 241|Homo sapiens NY-REN-41 antigen protein.
Length = 241
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 778 PKPISC-NFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
P P+SC N T+ P G + +F D+ + D ED+ +DDE
Sbjct: 93 PLPLSCSNSTRSLLSPLGHQSFQF-DEDDGDGEDEEDVDDE 132
>AF031554-1|AAC51901.1| 632|Homo sapiens immunoglobulin-like
transcript 5 protein.
Length = 632
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = -2
Query: 838 VRADRFKSRKDDGPCAATYSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
V D +S D+ P A TY+P S + + P S + F D + E+ +D E
Sbjct: 526 VELDSQQSPHDEDPQAVTYAPVKHSSPRREMASPP-SSLSGEFLDTKDRQVEEDRQMDTE 584
Query: 658 TNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLG-PVVNKMLYRSLPL 506
+++ + S T+R +K EP P+ G P +Y +L +
Sbjct: 585 AAASEASQDVTYAQLHSLTLR-----RKATEPPPSQEGEPPAEPSIYATLAI 631
>AF009642-1|AAC51897.1| 632|Homo sapiens immunoglobulin-like
transcript 5 protein protein.
Length = 632
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = -2
Query: 838 VRADRFKSRKDDGPCAATYSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
V D +S D+ P A TY+P S + + P S + F D + E+ +D E
Sbjct: 526 VELDSQQSPHDEDPQAVTYAPVKHSSPRREMASPP-SSLSGEFLDTKDRQVEEDRQMDTE 584
Query: 658 TNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLG-PVVNKMLYRSLPL 506
+++ + S T+R +K EP P+ G P +Y +L +
Sbjct: 585 AAASEASQDVTYAQLHSLTLR-----RKATEPPPSQEGEPPAEPSIYATLAI 631
>AF009641-1|AAC51896.1| 632|Homo sapiens immunoglobulin-like
transcript 5 protein protein.
Length = 632
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = -2
Query: 838 VRADRFKSRKDDGPCAATYSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
V D +S D+ P A TY+P S + + P S + F D + E+ +D E
Sbjct: 526 VELDSQQSPHDEDPQAVTYAPVKHSSPRREMASPP-SSLSGEFLDTKDRQVEEDRQMDTE 584
Query: 658 TNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLG-PVVNKMLYRSLPL 506
+++ + S T+R +K EP P+ G P +Y +L +
Sbjct: 585 AAASEASQDVTYAQLHSLTLR-----RKATEPPPSQEGEPPAEPSIYATLAI 631
>AF009635-1|AAC51890.1| 632|Homo sapiens immunoglobulin-like
transcript 5 protein protein.
Length = 632
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Frame = -2
Query: 838 VRADRFKSRKDDGPCAATYSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDE 659
V D +S D+ P A TY+P S + + P S + F D + E+ +D E
Sbjct: 526 VELDSQQSPHDEDPQAVTYAPVKHSSPRREMASPP-SSLSGEFLDTKDRQVEEDRQMDTE 584
Query: 658 TNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLG-PVVNKMLYRSLPL 506
+++ + S T+R +K EP P+ G P +Y +L +
Sbjct: 585 AAASEASQDVTYAQLHSLTLR-----RKATEPPPSQEGEPPAEPSIYATLAI 631
>BC063891-1|AAH63891.1| 242|Homo sapiens C1orf201 protein protein.
Length = 242
Score = 31.5 bits (68), Expect = 3.9
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 5/149 (3%)
Frame = -2
Query: 820 KSRKDDGPCAATYSPKPISCNFTK--CTAVPFGSSASRFKDQFESDQEDQSAIDDETNEL 647
K+ K + P Y+ C CT F S R F D + +
Sbjct: 49 KALKFETPAPNYYNASVSCCKQRNNVCTRAGFMSKTQRGSFAFADKGPPPGHYDINESLV 108
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEP---SPADLGPVVNKMLYRSLPLQQMAPFFSSE 476
K + L S FKSKT R L P +P+D V K L+ P+ FS++
Sbjct: 109 KQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVPKKTLFPKNPILN----FSAQ 164
Query: 475 GRFMPWRNWISIFGNVKTPGPGYYDVTNY 389
+P + PGPG Y++ +Y
Sbjct: 165 PSPLPPKP--------PFPGPGQYEIVDY 185
>BC047705-1|AAH47705.1| 287|Homo sapiens chromosome 1 open reading
frame 201 protein.
Length = 287
Score = 31.5 bits (68), Expect = 3.9
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 5/149 (3%)
Frame = -2
Query: 820 KSRKDDGPCAATYSPKPISCNFTK--CTAVPFGSSASRFKDQFESDQEDQSAIDDETNEL 647
K+ K + P Y+ C CT F S R F D + +
Sbjct: 94 KALKFETPAPNYYNASVSCCKQRNNVCTRAGFMSKTQRGSFAFADKGPPPGHYDINESLV 153
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEP---SPADLGPVVNKMLYRSLPLQQMAPFFSSE 476
K + L S FKSKT R L P +P+D V K L+ P+ FS++
Sbjct: 154 KQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVPKKTLFPKNPILN----FSAQ 209
Query: 475 GRFMPWRNWISIFGNVKTPGPGYYDVTNY 389
+P + PGPG Y++ +Y
Sbjct: 210 PSPLPPKP--------PFPGPGQYEIVDY 230
>AL031431-7|CAI21410.1| 287|Homo sapiens novel protein protein.
Length = 287
Score = 31.5 bits (68), Expect = 3.9
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 5/149 (3%)
Frame = -2
Query: 820 KSRKDDGPCAATYSPKPISCNFTK--CTAVPFGSSASRFKDQFESDQEDQSAIDDETNEL 647
K+ K + P Y+ C CT F S R F D + +
Sbjct: 94 KALKFETPAPNYYNASVSCCKQRNNVCTRAGFMSKTQRGSFAFADKGPPPGHYDINESLV 153
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEP---SPADLGPVVNKMLYRSLPLQQMAPFFSSE 476
K + L S FKSKT R L P +P+D V K L+ P+ FS++
Sbjct: 154 KQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVPKKTLFPKNPILN----FSAQ 209
Query: 475 GRFMPWRNWISIFGNVKTPGPGYYDVTNY 389
+P + PGPG Y++ +Y
Sbjct: 210 PSPLPPKP--------PFPGPGQYEIVDY 230
>AL031431-6|CAI21411.1| 334|Homo sapiens novel protein protein.
Length = 334
Score = 31.5 bits (68), Expect = 3.9
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 5/149 (3%)
Frame = -2
Query: 820 KSRKDDGPCAATYSPKPISCNFTK--CTAVPFGSSASRFKDQFESDQEDQSAIDDETNEL 647
K+ K + P Y+ C CT F S R F D + +
Sbjct: 141 KALKFETPAPNYYNASVSCCKQRNNVCTRAGFMSKTQRGSFAFADKGPPPGHYDINESLV 200
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEP---SPADLGPVVNKMLYRSLPLQQMAPFFSSE 476
K + L S FKSKT R L P +P+D V K L+ P+ FS++
Sbjct: 201 KQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVPKKTLFPKNPILN----FSAQ 256
Query: 475 GRFMPWRNWISIFGNVKTPGPGYYDVTNY 389
+P + PGPG Y++ +Y
Sbjct: 257 PSPLPPKP--------PFPGPGQYEIVDY 277
>EF560731-1|ABQ59041.1| 564|Homo sapiens KLHL7 protein protein.
Length = 564
Score = 31.1 bits (67), Expect = 5.2
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLGPVVNKMLYRSL-PLQQMAPFFSSEGR 470
K P +S NF SKTV+ +PL+ + +P L V++ M Y L P + + R
Sbjct: 210 KVRFPLISKNFLSKTVQAEPLI----QDNPECLKMVISGMRYHLLSPEDREELVDGTRPR 265
Query: 469 FMPWRNWISIFGNVKTPGPGYYDVTNYSKKNI 374
I++FG + Y++ +YS +I
Sbjct: 266 RKKHDYRIALFGGSQPQSCRYFNPKDYSWTDI 297
>BC039585-1|AAH39585.1| 586|Homo sapiens kelch-like 7 (Drosophila)
protein.
Length = 586
Score = 31.1 bits (67), Expect = 5.2
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLGPVVNKMLYRSL-PLQQMAPFFSSEGR 470
K P +S NF SKTV+ +PL+ + +P L V++ M Y L P + + R
Sbjct: 232 KVRFPLISKNFLSKTVQAEPLI----QDNPECLKMVISGMRYHLLSPEDREELVDGTRPR 287
Query: 469 FMPWRNWISIFGNVKTPGPGYYDVTNYSKKNI 374
I++FG + Y++ +YS +I
Sbjct: 288 RKKHDYRIALFGGSQPQSCRYFNPKDYSWTDI 319
>AY028802-1|AAK29099.1| 538|Homo sapiens kelch/BTB protein protein.
Length = 538
Score = 31.1 bits (67), Expect = 5.2
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLGPVVNKMLYRSL-PLQQMAPFFSSEGR 470
K P +S NF SKTV+ +PL+ + +P L V++ M Y L P + + R
Sbjct: 184 KVRFPLISKNFLSKTVQAEPLI----QDNPECLKMVISGMRYHLLSPEDREELVDGTRPR 239
Query: 469 FMPWRNWISIFGNVKTPGPGYYDVTNYSKKNI 374
I++FG + Y++ +YS +I
Sbjct: 240 RKKHDYRIALFGGSQPQSCRYFNPKDYSWTDI 271
>AK056390-1|BAB71175.1| 564|Homo sapiens protein ( Homo sapiens
cDNA FLJ31828 fis, clone NT2RP6000109, weakly similar to
RING CANAL PROTEIN. ).
Length = 564
Score = 31.1 bits (67), Expect = 5.2
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 646 KSNVPQLSSNFKSKTVRFKPLVKKKDEPSPADLGPVVNKMLYRSL-PLQQMAPFFSSEGR 470
K P +S NF SKTV+ +PL+ + +P L V++ M Y L P + + R
Sbjct: 210 KVRFPLISKNFLSKTVQAEPLI----QDNPECLKMVISGMRYHLLSPEDREELVDGTRPR 265
Query: 469 FMPWRNWISIFGNVKTPGPGYYDVTNYSKKNI 374
I++FG + Y++ +YS +I
Sbjct: 266 RKKHDYRIALFGGSQPQSCRYFNPKDYSWTDI 297
>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
occludens) protein ZO-1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -2
Query: 820 KSRKDDGPCAAT-YSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDETNELK 644
KS D P T + K ++ + + T P+ SSA F+ +FES + + + + ET
Sbjct: 1490 KSFPDKAPVNGTEQTQKTVTPAYNRFTPKPYTSSARPFERKFESPKFNHNLLPSET---- 1545
Query: 643 SNVPQLSSNFKSKTVRFKPLVKKKDEPSPAD 551
++ P LSS + K LVK P +
Sbjct: 1546 AHKPDLSSKTPTSP---KTLVKSHSLAQPPE 1573
>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -2
Query: 820 KSRKDDGPCAAT-YSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDETNELK 644
KS D P T + K ++ + + T P+ SSA F+ +FES + + + + ET
Sbjct: 1502 KSFPDKAPVNGTEQTQKTVTPAYNRFTPKPYTSSARPFERKFESPKFNHNLLPSET---- 1557
Query: 643 SNVPQLSSNFKSKTVRFKPLVKKKDEPSPAD 551
++ P LSS + K LVK P +
Sbjct: 1558 AHKPDLSSKTPTSP---KTLVKSHSLAQPPE 1585
>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 30.7 bits (66), Expect = 6.9
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -2
Query: 820 KSRKDDGPCAAT-YSPKPISCNFTKCTAVPFGSSASRFKDQFESDQEDQSAIDDETNELK 644
KS D P T + K ++ + + T P+ SSA F+ +FES + + + + ET
Sbjct: 1502 KSFPDKAPVNGTEQTQKTVTPAYNRFTPKPYTSSARPFERKFESPKFNHNLLPSET---- 1557
Query: 643 SNVPQLSSNFKSKTVRFKPLVKKKDEPSPAD 551
++ P LSS + K LVK P +
Sbjct: 1558 AHKPDLSSKTPTSP---KTLVKSHSLAQPPE 1585
>BC017650-1|AAH17650.1| 192|Homo sapiens C1orf201 protein protein.
Length = 192
Score = 30.7 bits (66), Expect = 6.9
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Frame = -2
Query: 748 CTAVPFGSSASRFKDQFESDQEDQSAIDDETNELKSNVPQLSSNFKSKTVRFKPLVKKKD 569
CT F S R F D + +K + L S FKSKT R L
Sbjct: 25 CTRAGFMSKTQRGSFAFADKGPPPGHYDINESLVKQSPNTLMSCFKSKTNRGLKLTSTGP 84
Query: 568 EP---SPADLGPVVNKMLYRSLPLQQMAPFFSSEGRFMPWRNWISIFGNVKTPGPGYYDV 398
P +P+D V K L+ P+ FS++ +P + PGPG Y++
Sbjct: 85 GPGYYNPSDCTKVPKKTLFPKNPILN----FSAQPSPLPPKP--------PFPGPGQYEI 132
Query: 397 TNY 389
+Y
Sbjct: 133 VDY 135
>BC016987-1|AAH16987.1| 284|Homo sapiens FAM44A protein protein.
Length = 284
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 709 KDQFESDQEDQSAIDDETNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSP 557
K + ESD+E++ +DE + + S +SKT + P +K+K E SP
Sbjct: 214 KKEQESDEEEEEEEEDEPSGATTRSTTRSEAQRSKT-QLSPSIKRKREVSP 263
>AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein.
Length = 1804
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 709 KDQFESDQEDQSAIDDETNELKSNVPQLSSNFKSKTVRFKPLVKKKDEPSP 557
K + ESD+E++ +DE + + S +SKT + P +K+K E SP
Sbjct: 1734 KKEQESDEEEEEEEEDEPSGATTRSTTRSEAQRSKT-QLSPSIKRKREVSP 1783
>AK023327-1|BAB14529.1| 155|Homo sapiens protein ( Homo sapiens
cDNA FLJ13265 fis, clone OVARC1000937. ).
Length = 155
Score = 30.3 bits (65), Expect = 9.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 586 LVKKKDEPSPADLGPVVNKMLYRSLPLQQMAPFFSSE 476
LV+ +D+ S + LGP+V + R PLQ +A +E
Sbjct: 2 LVRGRDQGSGSRLGPIVRRWAPRPSPLQSLAASLDAE 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,183,705
Number of Sequences: 237096
Number of extensions: 2579373
Number of successful extensions: 5091
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5087
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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