Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13p01
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    27   0.49 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.0  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   8.0  

>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 427 PYKIKVPDIVVPPMPPSN-AKEISNEDGRELFTNPEINHNHTATPNIQDLFRNS 269
           PY   V D+ + P+ P+N A+ +SN   R LFTN         TPN  D    S
Sbjct: 461 PYLWSVTDLTISPILPTNHARTVSNRFVR-LFTN--FARFGNPTPNAVDTLLQS 511


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 433 YDPYKIKVPDIVVPPMPPSNAKEISNEDGR 344
           + PYK+ VP+ VV    PS+ +++ + D R
Sbjct: 679 WGPYKLSVPNCVV----PSSWRDVESRDNR 704


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 107 QQQHPIQWLPGFVEGK 154
           Q  HP+ W P F+ G+
Sbjct: 459 QADHPVHWSPVFMGGR 474


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 292 IQDLFRNSAIVHPDYWR 242
           ++D+  N+ +VHPDY++
Sbjct: 196 VRDVPINAYVVHPDYYK 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,177
Number of Sequences: 2352
Number of extensions: 14092
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)