Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13o19
(855 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 409 e-115
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 308 9e-85
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 294 1e-80
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 287 1e-78
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 278 6e-76
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 270 1e-73
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 208 6e-55
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 202 7e-53
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 194 1e-50
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 180 2e-46
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 177 2e-45
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 172 6e-44
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 168 8e-43
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 158 1e-39
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 147 2e-36
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 141 1e-34
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 136 3e-33
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 132 5e-32
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 130 2e-31
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 118 1e-27
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 86 7e-18
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 42 1e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 33 0.052
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 32 0.12
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 32 0.12
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.16
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 31 0.16
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.21
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 31 0.21
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 31 0.28
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 30 0.36
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 0.84
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.5
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 28 1.5
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.5
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.9
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 2.6
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 3.4
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 4.5
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 4.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 4.5
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.5
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 26 5.9
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 5.9
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 26 5.9
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.9
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 26 7.8
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 409 bits (1007), Expect = e-115
Identities = 201/253 (79%), Positives = 224/253 (88%), Gaps = 2/253 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
L++QIQEIKE+VELPLTHPE YEEMGIKPPKGVILYG PGTGKTLLAKAVANQTSATFLR
Sbjct: 196 LESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLR 255
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
VVGSELIQKYLGDGP+LVR+LF AEEH+PSIVFIDEIDA+GTKRYD+ SG EREIQRTM
Sbjct: 256 VVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTM 315
Query: 417 LELLNQLDGFD-SRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIH 241
LELLNQLDGFD S+ D+KVIMATNRI LDPALIRPGRIDRKI F PDE TKR+IFTIH
Sbjct: 316 LELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIH 375
Query: 240 TSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLY 61
TS+M L +DVNL ELI KDDLSGA+IKAI +EAGL+ALRERRM+V +DF++++E VL
Sbjct: 376 TSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLK 435
Query: 60 RKKEGTPE-GLYL 25
K EG P GLY+
Sbjct: 436 TKDEGGPAGGLYI 448
Score = 49.6 bits (113), Expect = 6e-07
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -3
Query: 853 DDTDPMVSVMKLEKAPQETYADIGG 779
DDTDPM++VMKL+KAP E+YADIGG
Sbjct: 171 DDTDPMINVMKLDKAPTESYADIGG 195
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 308 bits (755), Expect = 9e-85
Identities = 142/245 (57%), Positives = 188/245 (76%), Gaps = 1/245 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
L+ QI+EIKE +ELP+ HPE +E +GI PKG++LYGPPGTGKTLLA+AVA+ T F+R
Sbjct: 150 LEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIR 209
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRT 421
V GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R DS+ G G+ E+QRT
Sbjct: 210 VSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRT 269
Query: 420 MLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIH 241
MLELLNQLDGF++ ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP P + + I IH
Sbjct: 270 MLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIH 329
Query: 240 TSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLY 61
+ M L ++L + + SGA++K +CTEAG+ ALRERR+ VT EDF+ + VL
Sbjct: 330 SRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLN 389
Query: 60 RKKEG 46
+ G
Sbjct: 390 KGDSG 394
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 844 DPMVSVMKLEKAPQETYADIGG 779
DP+VS+M +EK P TY +GG
Sbjct: 128 DPLVSLMMVEKIPDSTYEMVGG 149
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 294 bits (721), Expect = 1e-80
Identities = 134/234 (57%), Positives = 184/234 (78%), Gaps = 1/234 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
LD Q QE++E+VELPLT + Y ++GI PP+GV+LYGPPGTGKT+L KAVAN T+A F+R
Sbjct: 139 LDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIR 198
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
VVGSE +QKYLG+GP++VR++FR+A E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +
Sbjct: 199 VVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 258
Query: 417 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP-LPDEKTKRRIFTIH 241
+ELL Q+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEFP D + +R +F
Sbjct: 259 IELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTI 318
Query: 240 TSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 79
T++M L+ +V+L IM D SGA I AI +AGL+A+R+ R + D +++
Sbjct: 319 TAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEA 372
Score = 26.2 bits (55), Expect = 5.9
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 850 DTDPMVSVMKLEKAPQETYADIGG 779
+ D +S+++ ++ P +YAD+GG
Sbjct: 115 EADSSISMLRPDERPDVSYADVGG 138
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 287 bits (704), Expect = 1e-78
Identities = 128/243 (52%), Positives = 184/243 (75%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
L QI+E+ E++ LP+ + + ++G+KPPKG +++GPPGTGKTLLA+A A Q++ATFL+
Sbjct: 190 LSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLK 249
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
+ +L+Q ++GDG KLVR+ F +A+E +P+I+FIDE+DA+GTKR+DS G+RE+QRTM
Sbjct: 250 LAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 309
Query: 417 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHT 238
LELLNQLDGF S VKVI ATNR++TLDPAL+R GR+DRK+EFPLP+E+ + I IH+
Sbjct: 310 LELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHS 369
Query: 237 SRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYR 58
+M + DD+N EL S D+ +GA +K++C EAG++ALR+ K+ +E F V R
Sbjct: 370 RKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMR 429
Query: 57 KKE 49
K +
Sbjct: 430 KSK 432
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 844 DPMVSVMKLEKAPQETYADIGG 779
D V M++++ P E Y+DIGG
Sbjct: 168 DSRVKAMEVDEKPTERYSDIGG 189
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 278 bits (682), Expect = 6e-76
Identities = 128/252 (50%), Positives = 179/252 (71%)
Frame = -1
Query: 768 QIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG 589
QI+ ++E VELPL PE + ++GI PPKG++LYGPPGTGKTL A+AVAN+T ATF+RV+G
Sbjct: 187 QIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIG 246
Query: 588 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLEL 409
SEL+QKY+G+G ++VRELF +A I+F DEIDA+G R+D +GG+ E+QRTMLEL
Sbjct: 247 SELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 306
Query: 408 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM 229
+ QLDGFD RG++KV+ ATNR TLD AL+RPGRIDRK+EF LPD + + I IH M
Sbjct: 307 ITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSM 366
Query: 228 TLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 49
+ D+ + +GA+++++CTEAG+ A+R RR T +DF + + V+ ++
Sbjct: 367 AIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426
Query: 48 GTPEGLYL*MYS 13
+ Y+ M S
Sbjct: 427 FSSTADYMNMSS 438
Score = 31.5 bits (68), Expect = 0.16
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 844 DPMVSVMKLEKAPQETYADIGG 779
DP V++M++E+ P TY D+GG
Sbjct: 162 DPSVTMMQVEEKPDVTYGDVGG 183
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 270 bits (663), Expect = 1e-73
Identities = 123/246 (50%), Positives = 175/246 (71%), Gaps = 1/246 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
L+ QI+E++E +ELPL +PE + +GIKPPKGV+LYGPPGTGKTLLA+AVA FL+
Sbjct: 137 LNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLK 196
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
VV S ++ KY+G+ +++RE+F A+EH P ++F+DEIDA+G +R+ + +REIQRT+
Sbjct: 197 VVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTL 256
Query: 417 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHT 238
+ELLNQ+DGFD G K+IMATNR +TLDPAL+RPGR+DRKIE PLP+E + I IH
Sbjct: 257 MELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHL 316
Query: 237 SRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYR 58
+++ +++ L+ D +GAD++ + TEAG +A++E R V D + V
Sbjct: 317 EKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADL 376
Query: 57 KK-EGT 43
KK EGT
Sbjct: 377 KKLEGT 382
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 208 bits (509), Expect = 6e-55
Identities = 97/218 (44%), Positives = 150/218 (68%)
Frame = -1
Query: 768 QIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG 589
Q+ +I+E VELPL HP+ ++ +GIKPP+G+++YGPPGTGKTL+A+AVAN+T A F + G
Sbjct: 232 QMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLING 291
Query: 588 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLEL 409
E++ K G+ +R+ F AE+++P+I+FIDEID++ KR +N GE E +R + +L
Sbjct: 292 PEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN--GEVE-RRVVSQL 348
Query: 408 LNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRM 229
L +DG +R +V V+ ATNR ++DPAL R GR DR+++ +PD + I IHT M
Sbjct: 349 LTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNM 408
Query: 228 TLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRER 115
LADDV+L ++ G+D+ ++C+EA + +RE+
Sbjct: 409 KLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREK 446
Score = 180 bits (438), Expect = 2e-46
Identities = 89/231 (38%), Positives = 145/231 (62%)
Frame = -1
Query: 762 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 583
+E++E+V++P+ + E + G+ P KGV+ +GPPGTGKTLLAKA+AN+ SA F+ V G E
Sbjct: 507 RELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPE 566
Query: 582 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 403
L+ + G+ VR++F A AP +VF+DE+D++ R +++G R + +LL
Sbjct: 567 LLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR-GASAGDSGGGDRVVNQLLT 625
Query: 402 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 223
++DG +S+ +V VI ATNR + +DPAL+RPGR+D+ I PLPDE+ + I +
Sbjct: 626 EMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPV 685
Query: 222 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKES 70
A+DV+L + + SGAD++ + A +A+++ ED K+ E+
Sbjct: 686 AEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS----IEEDIKRENET 732
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 202 bits (492), Expect = 7e-53
Identities = 94/215 (43%), Positives = 144/215 (66%)
Frame = -1
Query: 762 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 583
Q++KESVE PLTH E + +G++PPKGV+LYGPPG KT+ AKA+A +T F+ V G E
Sbjct: 558 QKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPE 617
Query: 582 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 403
L K++G+ + VR++F+ A + +PS++F DEIDA+ R + NS R + LLN
Sbjct: 618 LFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLN 672
Query: 402 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 223
+LDG ++ +V V+ ATNR + +DPAL+RPGR+DR + P+ + +++I I +M
Sbjct: 673 ELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKF 732
Query: 222 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALRE 118
A+DV+L + + SGA++ A+C EAGL+A+ E
Sbjct: 733 AEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHE 767
Score = 171 bits (416), Expect = 1e-43
Identities = 90/220 (40%), Positives = 132/220 (60%), Gaps = 1/220 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
L QI +I++ VELP +PE ++ I PP+GV+LYGPPGTGKT++ +AVA + +A
Sbjct: 284 LQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFT 343
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
+ G ++ KYLG+ +R++F A H PSI+FIDEIDA+ KR + S E R +
Sbjct: 344 IDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAV 400
Query: 417 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHT 238
LL LDG + G V VI ATNR ++D AL RPGR++++IE +PD+ + I +
Sbjct: 401 ATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLL 460
Query: 237 SRM-TLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 121
S + +D L +L GAD+ A+ EA L A++
Sbjct: 461 SGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK 500
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 194 bits (473), Expect = 1e-50
Identities = 102/243 (41%), Positives = 146/243 (60%), Gaps = 3/243 (1%)
Frame = -1
Query: 786 LVALDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 607
+ +D +EI E V+ L +P++YE +G K P+G IL GPPGTGKTLLAKA A + +
Sbjct: 298 VAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVP 356
Query: 606 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR-YDSNSGGEREI 430
FL V GSE ++ ++G GP VR+LF A ++AP I+FIDEIDA+G R G E
Sbjct: 357 FLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDER 416
Query: 429 QRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 250
+ T+ +LL ++DGF S + V TNR + LDPAL+RPGR DR+I PD + +IF
Sbjct: 417 ESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIF 476
Query: 249 TIHTSRMTLADDVNL--SELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 76
+H + AD+++L L + +GADI +C E L+A R +V F+++
Sbjct: 477 KVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAI 536
Query: 75 ESV 67
E V
Sbjct: 537 ERV 539
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 180 bits (439), Expect = 2e-46
Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 4/242 (1%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
+D +E++E V+ L P ++ +G K P+GV+L GPPGTGKT+LA+AVA + + F
Sbjct: 272 VDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFF 330
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
+ GS+ + Y+G G K VRELF A + APSI+FIDE+DA+G KR N+ +++T+
Sbjct: 331 MSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKR---NARDAAHMRQTL 387
Query: 417 LELLNQLDGFDSRGD----VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 250
+LL LDGF D V I ATN E+LDPAL RPGR DR I PLPD + + I
Sbjct: 388 NQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAIL 447
Query: 249 TIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKES 70
HT + L DV+LS + +GAD+ + +A + A + V+ D + SK+
Sbjct: 448 LQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDR 507
Query: 69 VL 64
+L
Sbjct: 508 IL 509
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 779
Score = 177 bits (430), Expect = 2e-45
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
Frame = -1
Query: 759 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 580
E++ ++ P+ PE Y+ +GI P GV+L+GPPG GKTLLAKAVAN++ A F+ + G EL
Sbjct: 503 ELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPEL 562
Query: 579 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQ 400
+ KY+G+ + VR++F A +P ++F DE+DA+ +R DS S + T LL +
Sbjct: 563 LNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTE 619
Query: 399 LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLA 220
LDG R V VI ATNR + +DPA++RPGR+D+ + LPD + I T + L
Sbjct: 620 LDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLH 679
Query: 219 DDVNLSELIMSK--DDLSGADIKAICTEAGLMALR 121
++VNL L + + SGAD+ A+ EA + ALR
Sbjct: 680 EEVNLDVLGRDERCSNFSGADLAALVREAAVTALR 714
Score = 163 bits (396), Expect = 3e-41
Identities = 86/220 (39%), Positives = 127/220 (57%), Gaps = 1/220 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 598
LD I E+ E V +P+ HPE Y+ GI PP+GV+L+GPPG GKT+LA A+AN+ F+
Sbjct: 179 LDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFIS 238
Query: 597 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
+ ++ G+ K VRE+F A+ AP ++FIDEIDAV KR + ER I
Sbjct: 239 ISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQF 298
Query: 417 LELLNQLDGFDSRG-DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIH 241
L +++L + G V VI ATNR ++LD AL R GR DR+I +P + + +I
Sbjct: 299 LTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTM 358
Query: 240 TSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 121
+ L+ D + +L GAD+KA+ AG++A++
Sbjct: 359 AKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 172 bits (418), Expect = 6e-44
Identities = 90/225 (40%), Positives = 134/225 (59%), Gaps = 6/225 (2%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSA---- 610
LD I ++KE V LPL +PE ++ ++PP+GV+ +GPPGTGKTL+A+A+A S+
Sbjct: 271 LDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKK 330
Query: 609 -TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE 433
+F G++ + K++G+ + +R LF A+ PSI+F DEID + R
Sbjct: 331 VSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHAS 390
Query: 432 IQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 253
I T+L L+ DG +SRG V +I ATNR + +DPAL RPGR DR+ FPLPD +++I
Sbjct: 391 IVSTLLALM---DGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKI 447
Query: 252 FTIHTSRMTLADDVNLSELIMSKD-DLSGADIKAICTEAGLMALR 121
IHT L ++ K GAD++A+CTEA L +++
Sbjct: 448 IEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIK 492
Score = 35.1 bits (77), Expect = 0.013
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -1
Query: 720 EYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLV 544
E +E + I P+ +I G G G+T L A+ Q ++ S L+Q +
Sbjct: 593 ETFETLRIYKPRFLIC-GRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSI 651
Query: 543 RELFRVAEEHAPSIVFIDEID 481
LF H PSI++I +ID
Sbjct: 652 IHLFLEVRRHTPSIIYIPDID 672
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 168 bits (409), Expect = 8e-43
Identities = 96/226 (42%), Positives = 134/226 (59%), Gaps = 7/226 (3%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA------NQT 616
L+ I ++KE V LPL +PE + + I PP+GV+ +GPPGTGKTL+A+ +A NQ
Sbjct: 377 LEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQK 436
Query: 615 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 436
+ FLR GS+ + K++G+ + +R LF A PSI+F DEID + R
Sbjct: 437 ISFFLRK-GSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHS 495
Query: 435 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 256
I T+L L+ DG D+RG V VI ATNR LDPAL RPGR DR+ FPLP+++ + +
Sbjct: 496 SIVSTLLALM---DGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMK 552
Query: 255 IFTIHTSRMT-LADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 121
I I++ + + L L S GAD+KA+CTEA L A+R
Sbjct: 553 ILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVR 598
Score = 30.7 bits (66), Expect = 0.28
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -1
Query: 660 GTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 484
G G T L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 483 D 481
+
Sbjct: 776 E 776
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 158 bits (383), Expect = 1e-39
Identities = 82/222 (36%), Positives = 138/222 (62%), Gaps = 4/222 (1%)
Frame = -1
Query: 756 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 577
++++++LPL PE + + G+KP GV+LYGPPGTGKTLLAKAVA + S F+ + G EL+
Sbjct: 667 LRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELL 725
Query: 576 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQL 397
Y+G+ VR +F A +P ++F DE+D++ R +S+ G + R + +LL +L
Sbjct: 726 NMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAEL 784
Query: 396 DGF--DSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL-PDEKTKRRIFTIHTSRMT 226
D D+ V VI ATNR + LDP+L+RPGR D+ + + E++K + T
Sbjct: 785 DSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFK 844
Query: 225 LADDVNLSELIMS-KDDLSGADIKAICTEAGLMALRERRMKV 103
L + ++L+E+ + + +GAD+ A+C++A L A++ + ++
Sbjct: 845 LDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
Score = 33.5 bits (73), Expect = 0.039
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Frame = -1
Query: 678 ILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP-SI 502
+L+G P TGKT + VA+ SA + E D + ++F +P +I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 501 VFIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDS-RGDVKVIMATNRIETLDP 328
+F+ ++D + + N G + IQ LL+++D S +G VI + IE +
Sbjct: 485 IFVKDLDVLSISSDEGNIVPGSKSIQ----ILLSKIDLVKSPQGRYIVIGTCHSIEKIPY 540
Query: 327 ALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAI 151
++ + K DE+ + + I+ + + + ++L ++ + + +S +++ +
Sbjct: 541 EILSESFFELKFSELEMDERLE--LLKIYANNVIIDKRISLKDVALKTNSMSFGELECL 597
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 147 bits (356), Expect = 2e-36
Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 1/223 (0%)
Frame = -1
Query: 786 LVALDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 607
+ L+ + +KE+V LP+ P+ + G KP G++LYGPPGTGK+ LAKAVA + +T
Sbjct: 131 IAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGST 189
Query: 606 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 427
F + S+L+ K++G+ +LVR+LF +A E PSI+FIDEID++ R + S R I+
Sbjct: 190 FFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIK 249
Query: 426 RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT 247
L +N + G D G V V+ ATN TLD A+ R R +++I PLP+ + R+F
Sbjct: 250 TEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFE 305
Query: 246 IHTSRM-TLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 121
++ ++ + + EL D SG+DI + +A + +R
Sbjct: 306 LNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVR 348
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 141 bits (341), Expect = 1e-34
Identities = 89/240 (37%), Positives = 136/240 (56%), Gaps = 15/240 (6%)
Frame = -1
Query: 777 LDTQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFL 601
LD++ I + + L P E++GI KG++LYGPPGTGKTL+A+ + +A
Sbjct: 274 LDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREP 333
Query: 600 RVV-GSELIQKYLGDGPKLVRELFRVAE--------EHAPSIVFIDEIDAVGTKRYDSNS 448
++V G E++ KY+G + VR+LF AE E I+ DE+DA+ KR +S
Sbjct: 334 KIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSS 391
Query: 447 GGEREI-QRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 271
GG+ + + + +LL ++DG D ++ VI TNR + +D AL+RPGR++ +E LPDE
Sbjct: 392 GGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDE 451
Query: 270 KTKRRIFTIHTSRMT----LADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKV 103
+ +I IHTSRM L +DV++ EL + SGA+I + A A R +KV
Sbjct: 452 HGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAF-YRHIKV 510
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 136 bits (330), Expect = 3e-33
Identities = 68/221 (30%), Positives = 128/221 (57%)
Frame = -1
Query: 762 QEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSE 583
+ +++ +E P+ + Y++ ++ P G++L+G PG GKT LA A+++ F+ + G E
Sbjct: 616 EAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPE 675
Query: 582 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN 403
L+ KY+G + VR+LF A+ P ++F DE D+V +R ++G R + ++L
Sbjct: 676 LLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG---VTDRVVNQILT 732
Query: 402 QLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTL 223
Q+DG +S V ++ AT R + +DPAL+RPGR+D+ I LP+E+ + + +R +
Sbjct: 733 QMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHI 792
Query: 222 ADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVT 100
+ L +L D + AD+ ++ +A L+A+ + +V+
Sbjct: 793 ENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVS 833
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 132 bits (320), Expect = 5e-32
Identities = 76/222 (34%), Positives = 127/222 (57%), Gaps = 2/222 (0%)
Frame = -1
Query: 777 LDTQIQEIKESVELPLTHPEYYEEMG--IKPPKGVILYGPPGTGKTLLAKAVANQTSATF 604
+D + ++ + V PL +PE ++ G + PKG++LYGPPG GKT+LAKA+A Q+ ATF
Sbjct: 94 MDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATF 153
Query: 603 LRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQR 424
+ V L K+ G+ KLV LF +A + P+I+FIDEID +R ++ +I+
Sbjct: 154 INVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRTDHEAMAQIKA 213
Query: 423 TMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTI 244
+ + + L SR V V+ ATNR +D A+ R R+ + PLP+ + +R+I +
Sbjct: 214 EFMSMWDGLLSGQSR--VLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILEL 269
Query: 243 HTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRE 118
+ ++ L + + + ++ + LSG+ IK +C A + RE
Sbjct: 270 YLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVPRRE 311
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 130 bits (315), Expect = 2e-31
Identities = 84/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%)
Frame = -1
Query: 786 LVALDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 607
+ LD +KE+V P PE ++ + +P +G++L+GPPGTGKT+LA+AVA + AT
Sbjct: 381 IAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKAT 439
Query: 606 FLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 427
F + S L KYLGD KLVR LF VA+ S++F+DEID++ + R D SG E E
Sbjct: 440 FFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARND--SGNEHESS 497
Query: 426 RTM-LELLNQLDGFDSRGD---------VKVIMATNRIETLDPALIRPGRIDRKIEFPLP 277
R + E L Q + V V+ ATN +D A R R ++ PLP
Sbjct: 498 RRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLP 555
Query: 276 DEKTKRRIFT--IHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 121
+++T+ + + +H L ++ +L EL+ + SG+DI A+ +A + LR
Sbjct: 556 EKETRYKHLSHLLHNQVHCLTEE-DLEELVNLTEGYSGSDITALAKDAAMGPLR 608
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 118 bits (284), Expect = 1e-27
Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 14/226 (6%)
Frame = -1
Query: 756 IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 577
+KE+V P P+ ++ + +P +G++L+GPPGTGKT+LA+AVA ++ + F + S L
Sbjct: 471 LKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLT 529
Query: 576 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM-LELLNQ 400
K+LG+ KLVR LF +A++ +PSI+F+DEID++ + R S+ G E E R + E L Q
Sbjct: 530 SKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQ 587
Query: 399 LDGF----DSRGD-----VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR---- 259
SR V V+ ATN +D A R R R+ PLPDE T+R
Sbjct: 588 WSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLN 645
Query: 258 RIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALR 121
+ ++L D + ++ + + SG+D+ A+ +A + LR
Sbjct: 646 NLLKYQKHSLSLED---IEAIVKATEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 85.8 bits (203), Expect = 7e-18
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Frame = -1
Query: 801 KPMLTLVALDTQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA 625
K ML+ V L++ +++ I + V L + ++Y+ GI +G +LYGPPG+GKT A+A
Sbjct: 204 KRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALA 263
Query: 624 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG 445
+ + L +K L D +L L V + ++V ++++D+ R S
Sbjct: 264 GELDYDICVL---NLAEKGLTDD-RLNHLLSNVPPK---AVVLLEDVDSAFQGRERSGEV 316
Query: 444 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 265
G T LLN LDG S + + M TN E LDPAL+RPGR+D K +
Sbjct: 317 GFHA-NVTFSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQ 375
Query: 264 KRRIFT-IHTSRMTLADDVNLSELIMSKD 181
R +FT + +ADD LS+++ K+
Sbjct: 376 VREMFTRFYGHSPEMADD--LSDIVCPKN 402
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 41.5 bits (93), Expect = 1e-04
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Frame = -1
Query: 702 GIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP- 553
G K + L GPPG GKT + K++A+ + F R VG +E+ + Y+G P
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 552 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDS 382
K+V+ L +V E+ ++ IDEID VG + E+ ++ L +D
Sbjct: 627 KIVQALKKVQTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLD 684
Query: 381 RGDVKVIMATNRIETLDPALI 319
V + N I+T+ P L+
Sbjct: 685 VSSVLFVCTANTIDTIPPPLL 705
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.1 bits (72), Expect = 0.052
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 687 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 580
KGV+ G GTGKT LA A+A + F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1
Query: 696 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 568
+P + GP GTGKTLL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
Score = 31.5 bits (68), Expect = 0.16
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = -1
Query: 678 ILYGPPGTGKTLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 535
+L G PG GKT +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 534 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 358
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 357 ATNRIE 340
AT E
Sbjct: 317 ATTLAE 322
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 681 VILYGPPGTGKTLLAKAVANQTSATFLRV 595
+IL+G GTGKT LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 687 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 559
K V+L GPPG GKT A VA L + S+ K L D
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLD 452
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 31.5 bits (68), Expect = 0.16
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 3/175 (1%)
Frame = -1
Query: 681 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELFRVAEEHAP 508
++ YGPPGTGKT A A + R ++L++ D G VRE ++ +
Sbjct: 59 MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDAVRE--QIKNFAST 113
Query: 507 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 328
+F + D+ + + R ++E + +V+ + N I + P
Sbjct: 114 RQIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK--------NVRFCIICNYINKISP 165
Query: 327 ALIRPGRIDRKIEFPLPDEKTKRRI-FTIHTSRMTLADDVNLSELIMSKDDLSGA 166
A+ R R PLP ++ ++ + I + + D ++ L +SK D+ A
Sbjct: 166 AI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGDMRKA 218
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -1
Query: 681 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL--IQKYLG 562
+++ GP +GKT + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 30.7 bits (66), Expect = 0.28
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 687 KGVILYGPPGTGKTLLAKAVANQTSATFLRV 595
K ++L G PG GKT L A+A +T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 693 PPKGVILYGPPGTGKTLLAKAVANQTSA-TFLRVVG 589
PP V + GPPGTGK+ L K++ + S T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 30.7 bits (66), Expect = 0.28
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -1
Query: 531 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 352
++ + H ++ + E+D R+DS + G Q +EL + D +D D K + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 681 VILYGPPGTGKTLLAKAVANQT 616
+I+ G PGTGKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 29.1 bits (62), Expect = 0.84
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -1
Query: 687 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH 514
+ +++ GPP TGKT +A +A + F+ + SE+ + L++ L +
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVR 125
Query: 513 APSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 418
I E + V + S +GG ++ + T+
Sbjct: 126 IKEETEIIEGEVVEVQIDRSITGGNKQGKLTI 157
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 323 SAGSKVSIRFVAMITFTSPLESKPSS*FNNSNMVL*ISLSPPEFE-S*RLVPTASISSMK 499
++ S VS++ + + +SP+ S + + S L S++P + L+P++S
Sbjct: 546 TSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSS 605
Query: 500 TIEGACSSATRNSSRTNL 553
++ CS+ T S T+L
Sbjct: 606 SLITVCSNVTSEISSTSL 623
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 728 HIRNTMKKWESNLPKESSCTVLRALVKHSWPRLLQIRHLLPSYV*LDLNLY 576
HI N ++W S +++ L + W ++ + P Y+ DL LY
Sbjct: 152 HIANWPQQWASYHATKAAVKHLARALAVEWAPFARVNSVSPGYIDTDLTLY 202
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 681 VILYGPPGTGKT-LLAKAVANQTSATFLRVVGSELIQKYLGDG 556
++L GP GTGK+ LL + V NQ VG + + + G
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVG 54
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -1
Query: 696 KPPKGVILYGPPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 568
+P + GP G GKT L KA+A T +R SE +K+
Sbjct: 530 RPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 678 ILYGPPGTGKTLLAKAVANQTSATFL 601
++ GP G+GKT +AKAV+ + ++
Sbjct: 18 VVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 690 PKGVILYGPPGTGKTLL 640
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = -1
Query: 585 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 424
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 423 TMLEL 409
+E+
Sbjct: 288 RTMEV 292
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.5
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = +2
Query: 62 YRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKFTSSANVILDV 241
Y T SF L SS ++ S S++ P S+ I S P S +SS + S N+
Sbjct: 223 YNTSSF--LPSSVISSASLSSSSVLPTSI-ITSTSTPVTVSSSSLSSFTPSYSTNLTTTG 279
Query: 242 *MVKILLLVFSSG---KGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESKPSS*FNN 412
SS +S+ + P +S+ + S + +T ++ + + +
Sbjct: 280 STTTTGSATVSSSPFYSNSSVIPTSVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGS 339
Query: 413 SNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTN 550
+ + SPP + + ++PT+ SS+ + + SS T + +N
Sbjct: 340 ATF----TSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASN 381
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 270 KTKRRIFTIHTSRMTLADDVNLSELIMSKDDLSGADIKAICTEAGLMALRERRMKVTNED 91
KT I HT+R + + ++ I+ DD S DI +EA ALRE+ + +
Sbjct: 890 KTNETIID-HTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEA---ALREKNAQKASAL 945
Query: 90 FKK 82
FK+
Sbjct: 946 FKR 948
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 668 VLRALVKHSWPRLLQIR-HLLPSYV*LDLNLYKNIWVMVPSWFVNCSVLLRNMHLQL 501
++ + +KH+ L + LLPS V D YK++ +V W L++ H Q+
Sbjct: 219 LILSTIKHAEENNLDLSVRLLPSKVLSDSEFYKSLSNLVNVWLKTTRSLIKLFHDQI 275
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 536 CSVLLRNMHLQLFSLMKLMQWALNVM 459
C++L RN+HL+ FS LNV+
Sbjct: 4084 CNILYRNVHLEEFSWGTFKDLLLNVV 4109
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 82 FLEVLICYFHTALSKCHETSFSTYCLNISTRKIIF*HNKFRQV 210
FL + +H + KC ETS +C+ + R HN+ R++
Sbjct: 268 FLHIFELRYHIMIKKCLETS-KRFCIAMPLRARSDGHNEHREL 309
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 482 SISSMKTIEGACSSATRNSSRTNLGPSPKYFCISS 586
S S++ + + S + N+ R+ +GP +FC+S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1
Query: 678 ILYGPPGTGKTLLAKAV 628
++ GPPGTGKT+ + +V
Sbjct: 411 LIQGPPGTGKTVTSASV 427
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 613 RCLICNSLGQECFTSARRTVQDDSFG 690
+CL C +LG+ ++ QD S+G
Sbjct: 64 KCLACENLGKVMINHSKELPQDSSYG 89
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 5.9
Identities = 46/177 (25%), Positives = 71/177 (40%)
Frame = +2
Query: 32 SPSGVPSFLRYRTLSFDFLKSSFVTFIRRSLSAMRPASVHIALISAPERSSFDIISSDKF 211
S S PS + RT S F+ SS T P+S + S+P SS SS K
Sbjct: 129 STSIAPSMIGTRTSSSYFITSSSST----------PSSSSSSSSSSPSSSSSKSSSSSKS 178
Query: 212 TSSANVILDV*MVKILLLVFSSGKGNSIFLSIRPGRISAGSKVSIRFVAMITFTSPLESK 391
+SS++ SS +S S P + SK S + IT T+P S
Sbjct: 179 SSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS--SFITSTTPASSS 236
Query: 392 PSS*FNNSNMVL*ISLSPPEFES*RLVPTASISSMKTIEGACSSATRNSSRTNLGPS 562
S +V + + S T+S+SS+ + + SA+ +S+ ++ S
Sbjct: 237 SS-----GAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSASASVSSS 288
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 222 LMSFLMYEW*KSFSWFSRQARG 287
L+SFL+Y+ K+F W Q G
Sbjct: 172 LLSFLVYKMNKAFGWIMYQQHG 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,816,415
Number of Sequences: 5004
Number of extensions: 85015
Number of successful extensions: 379
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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