Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13n22
         (773 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58198-1|AAB02822.1|  323|Homo sapiens interleukin enhancer bind...    34   0.65 
U58197-1|AAB02821.1|  609|Homo sapiens interleukin enhancer bind...    34   0.65 
U58196-1|AAB02820.1|  655|Homo sapiens interleukin enhancer bind...    34   0.65 

>U58198-1|AAB02822.1|  323|Homo sapiens interleukin enhancer binding
           factor 3 protein.
          Length = 323

 Score = 33.9 bits (74), Expect = 0.65
 Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +1

Query: 34  SNDVLEREPPRGRAVRGHD---VIEHRKQ--CRLDGREHTSRRGHHVRPQLVRDVPGRRG 198
           S   L R PP G  VR  D   + +HR Q    L GREH     H   P      PGRRG
Sbjct: 26  SRRALGRGPPGGPRVRVSDEEALGDHRPQLVAGLGGREHGPLELHLPAPPRDLHAPGRRG 85

Query: 199 H 201
           H
Sbjct: 86  H 86


>U58197-1|AAB02821.1|  609|Homo sapiens interleukin enhancer binding
           factor 2 protein.
          Length = 609

 Score = 33.9 bits (74), Expect = 0.65
 Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +1

Query: 34  SNDVLEREPPRGRAVRGHD---VIEHRKQ--CRLDGREHTSRRGHHVRPQLVRDVPGRRG 198
           S   L R PP G  VR  D   + +HR Q    L GREH     H   P      PGRRG
Sbjct: 26  SRRALGRGPPGGPRVRVSDEEALGDHRPQLVAGLGGREHGPLELHLPAPPRDLHAPGRRG 85

Query: 199 H 201
           H
Sbjct: 86  H 86


>U58196-1|AAB02820.1|  655|Homo sapiens interleukin enhancer binding
           factor 1 protein.
          Length = 655

 Score = 33.9 bits (74), Expect = 0.65
 Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +1

Query: 34  SNDVLEREPPRGRAVRGHD---VIEHRKQ--CRLDGREHTSRRGHHVRPQLVRDVPGRRG 198
           S   L R PP G  VR  D   + +HR Q    L GREH     H   P      PGRRG
Sbjct: 26  SRRALGRGPPGGPRVRVSDEEALGDHRPQLVAGLGGREHGPLELHLPAPPRDLHAPGRRG 85

Query: 199 H 201
           H
Sbjct: 86  H 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,941,916
Number of Sequences: 237096
Number of extensions: 1442288
Number of successful extensions: 5305
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5303
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)