Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13m24
(764 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089314-1|AAL90052.1| 257|Drosophila melanogaster AT12418p pro... 142 4e-34
AE013599-3497|AAF46923.1| 257|Drosophila melanogaster CG13533-P... 142 4e-34
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P... 33 0.43
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P... 33 0.43
BT022596-1|AAY55012.1| 297|Drosophila melanogaster IP11947p pro... 30 4.0
BT022528-1|AAY54944.1| 299|Drosophila melanogaster IP11847p pro... 30 4.0
AE014296-1525|AAF50362.1| 438|Drosophila melanogaster CG13307-P... 30 4.0
AY113530-1|AAM29535.1| 464|Drosophila melanogaster RE60735p pro... 29 5.3
AE014298-2584|AAN09590.1| 464|Drosophila melanogaster CG12991-P... 29 5.3
AE014298-2583|AAF48739.2| 464|Drosophila melanogaster CG12991-P... 29 5.3
Y08969-1|CAA70166.1| 217|Drosophila melanogaster Nascent polype... 29 9.2
U50450-1|AAA93470.1| 389|Drosophila melanogaster tyrosine kinas... 29 9.2
AY047558-1|AAK77290.1| 445|Drosophila melanogaster GH07253p pro... 29 9.2
AE014297-4711|AAF57120.2| 445|Drosophila melanogaster CG31006-P... 29 9.2
AE014297-4710|AAF57122.3| 521|Drosophila melanogaster CG31006-P... 29 9.2
>AY089314-1|AAL90052.1| 257|Drosophila melanogaster AT12418p
protein.
Length = 257
Score = 142 bits (345), Expect = 4e-34
Identities = 80/190 (42%), Positives = 115/190 (60%), Gaps = 18/190 (9%)
Frame = -1
Query: 764 ECDKESFYQRCLPFSALFASXTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQ 585
EC+ ESF+QR LPF Y VK G+L+ + ++G PKV + V++GYF+GK SYQQ
Sbjct: 35 ECNTESFFQRSLPFGTGLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQQ 94
Query: 584 ACAEKLMALPGSYIGQILRDRKNGKIGGTSMPVQ---------TPSMYGATTNDIYSD-- 438
CAEK+M LP S++G++LR R+ G GG + T + + ++ D+YSD
Sbjct: 95 KCAEKIMRLPNSHLGELLRQRRQG--GGVISSITPDENLGRAFTLAPFSPSSADVYSDEA 152
Query: 437 --AGPGSSLDLDT-NRPVFS--EDTYRPD-NEGPGPNLEEPI-PARPSVSYDDLRRQNRG 279
G +SL+LDT +RP S +D YRP + G E P+ P++P SY+DLRR+NR
Sbjct: 153 YQPGRSTSLNLDTESRPTLSGLDDIYRPTLDSGSMLEAELPLEPSKPGQSYEDLRRRNRE 212
Query: 278 QYVKERQDPY 249
+Y K +Q PY
Sbjct: 213 EYSKHQQSPY 222
>AE013599-3497|AAF46923.1| 257|Drosophila melanogaster CG13533-PA
protein.
Length = 257
Score = 142 bits (345), Expect = 4e-34
Identities = 80/190 (42%), Positives = 115/190 (60%), Gaps = 18/190 (9%)
Frame = -1
Query: 764 ECDKESFYQRCLPFSALFASXTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQ 585
EC+ ESF+QR LPF Y VK G+L+ + ++G PKV + V++GYF+GK SYQQ
Sbjct: 35 ECNTESFFQRSLPFGTGLGLLAYFGVKNGYLQGHVKYGAVPKVVMGVILGYFVGKFSYQQ 94
Query: 584 ACAEKLMALPGSYIGQILRDRKNGKIGGTSMPVQ---------TPSMYGATTNDIYSD-- 438
CAEK+M LP S++G++LR R+ G GG + T + + ++ D+YSD
Sbjct: 95 KCAEKIMRLPNSHLGELLRQRRQG--GGVISSITPDENLGRAFTLAPFSPSSADVYSDEA 152
Query: 437 --AGPGSSLDLDT-NRPVFS--EDTYRPD-NEGPGPNLEEPI-PARPSVSYDDLRRQNRG 279
G +SL+LDT +RP S +D YRP + G E P+ P++P SY+DLRR+NR
Sbjct: 153 YQPGRSTSLNLDTESRPTLSGLDDIYRPTLDSGSMLEAELPLEPSKPGQSYEDLRRRNRE 212
Query: 278 QYVKERQDPY 249
+Y K +Q PY
Sbjct: 213 EYSKHQQSPY 222
>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
isoform B protein.
Length = 2922
Score = 33.1 bits (72), Expect = 0.43
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 482 TPSMYGATTNDIYSDAGPGSSLDLDTNRPVFS---EDTYRPDNEGPGPNLEEPIPAR 321
TPSM G T N + GP +S TN+ S + T P N+ L + +P R
Sbjct: 2268 TPSMKGKTANSGTASKGPSTSSSTKTNKSTVSKIPKPTNEPTNKSNSTPLNKKVPLR 2324
>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
isoform A protein.
Length = 2594
Score = 33.1 bits (72), Expect = 0.43
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 482 TPSMYGATTNDIYSDAGPGSSLDLDTNRPVFS---EDTYRPDNEGPGPNLEEPIPAR 321
TPSM G T N + GP +S TN+ S + T P N+ L + +P R
Sbjct: 1940 TPSMKGKTANSGTASKGPSTSSSTKTNKSTVSKIPKPTNEPTNKSNSTPLNKKVPLR 1996
>BT022596-1|AAY55012.1| 297|Drosophila melanogaster IP11947p
protein.
Length = 297
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -1
Query: 536 ILRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEG 357
++ D G G TS + + +T+ + GS+ P F+EDTY +
Sbjct: 178 VITDSSTGSTGDTSTGSSSVTSSDTSTDSTVTVTDSGSTTQSTATTPAFNEDTYCQEINS 237
Query: 356 PGPNLEEPIP 327
G PIP
Sbjct: 238 TG---RYPIP 244
>BT022528-1|AAY54944.1| 299|Drosophila melanogaster IP11847p
protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -1
Query: 536 ILRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEG 357
++ D G G TS + + +T+ + GS+ P F+EDTY +
Sbjct: 180 VITDSSTGSTGDTSTGSSSVTSSDTSTDSTVTVTDSGSTTQSTATTPAFNEDTYCQEINS 239
Query: 356 PGPNLEEPIP 327
G PIP
Sbjct: 240 TG---RYPIP 246
>AE014296-1525|AAF50362.1| 438|Drosophila melanogaster CG13307-PA
protein.
Length = 438
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = -1
Query: 536 ILRDRKNGKIGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEG 357
++ D G G TS + + +T+ + GS+ P F+EDTY +
Sbjct: 177 VITDSSTGSTGDTSTGSSSVTSSDTSTDSTVTVTDSGSTTQSTATTPAFNEDTYCQEINS 236
Query: 356 PGPNLEEPIP 327
G PIP
Sbjct: 237 TG---RYPIP 243
>AY113530-1|AAM29535.1| 464|Drosophila melanogaster RE60735p
protein.
Length = 464
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 497 SMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEGPGPNLEE 336
+ PV+T +Y T ++ A + +DL T+RP + P + G GP L +
Sbjct: 46 TQPVRTTKLYQTTVTQMWGPATQSNIMDL-THRPTTTRPVVTP-SYGGGPQLAQ 97
>AE014298-2584|AAN09590.1| 464|Drosophila melanogaster CG12991-PB,
isoform B protein.
Length = 464
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 497 SMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEGPGPNLEE 336
+ PV+T +Y T ++ A + +DL T+RP + P + G GP L +
Sbjct: 46 TQPVRTTKLYQTTVTQMWGPATQSNIMDL-THRPTTTRPVVTP-SYGGGPQLAQ 97
>AE014298-2583|AAF48739.2| 464|Drosophila melanogaster CG12991-PA,
isoform A protein.
Length = 464
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 497 SMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEGPGPNLEE 336
+ PV+T +Y T ++ A + +DL T+RP + P + G GP L +
Sbjct: 46 TQPVRTTKLYQTTVTQMWGPATQSNIMDL-THRPTTTRPVVTP-SYGGGPQLAQ 97
>Y08969-1|CAA70166.1| 217|Drosophila melanogaster Nascent
polypeptide associatedcomplex protein alpha subunit
protein.
Length = 217
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 452 DIYSDAGPGSSLDLDTNRPVFSEDTYRPDNEGPGPNLEEPIPA 324
+I S+A P +S + +D D++G P LEE +PA
Sbjct: 6 EIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVPA 48
>U50450-1|AAA93470.1| 389|Drosophila melanogaster tyrosine kinase
protein.
Length = 389
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 437 AGPGSSLDLDTNRPVFSEDTY 375
A PG+S+ L TNRP++ E+ +
Sbjct: 5 AQPGASISLSTNRPLYEEEWF 25
>AY047558-1|AAK77290.1| 445|Drosophila melanogaster GH07253p
protein.
Length = 445
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 340 RNPFQHARPFHTMTYVAKTEDSTSRRGRILTGNLMSKEQ 224
RN PF + Y A+ E R GR+L ++ KEQ
Sbjct: 252 RNVVMIEMPFKPLLYAARREMFFDRYGRLLMDKIIGKEQ 290
>AE014297-4711|AAF57120.2| 445|Drosophila melanogaster CG31006-PB,
isoform B protein.
Length = 445
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 340 RNPFQHARPFHTMTYVAKTEDSTSRRGRILTGNLMSKEQ 224
RN PF + Y A+ E R GR+L ++ KEQ
Sbjct: 252 RNVVMIEMPFKPLLYAARREMFFDRYGRLLMDKIIGKEQ 290
>AE014297-4710|AAF57122.3| 521|Drosophila melanogaster CG31006-PA,
isoform A protein.
Length = 521
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 340 RNPFQHARPFHTMTYVAKTEDSTSRRGRILTGNLMSKEQ 224
RN PF + Y A+ E R GR+L ++ KEQ
Sbjct: 328 RNVVMIEMPFKPLLYAARREMFFDRYGRLLMDKIIGKEQ 366
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,198,880
Number of Sequences: 53049
Number of extensions: 784146
Number of successful extensions: 2799
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2796
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -