Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13m23
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 50 4e-07
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 43 4e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.006
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 36 0.006
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 35 0.013
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 35 0.013
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.017
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 33 0.040
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 31 0.21
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.49
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 26 0.62
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.65
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 28 1.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.1
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.0
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 3.5
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 26 4.6
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 26 4.6
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 4.6
SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|... 26 6.1
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 25 8.0
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 25 8.0
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 25 8.0
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 49.6 bits (113), Expect = 4e-07
Identities = 32/97 (32%), Positives = 44/97 (45%)
Frame = -2
Query: 402 RQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXX 223
R G G+YRGY +A Y+P + WW Y + L K S +S + C A
Sbjct: 128 RSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICSA--LGTV 185
Query: 222 XXXXXTNPLDIVRARLQVEGVGTMKQVFKQLWAEEGL 112
+ PLDIV+ R QV M++ L AE+ L
Sbjct: 186 VATTISTPLDIVKTRYQVATSSAMRKAEYGLQAEKEL 222
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/94 (23%), Positives = 37/94 (39%)
Frame = -2
Query: 381 YYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXXXXXXXTN 202
YYRG SL P + L+ + Y + + P ++ +
Sbjct: 46 YYRGLPISLTLITPATCLYLSTYV---EAKRRFKPSVGEGAILYSICGMTAEVVSSFVWT 102
Query: 201 PLDIVRARLQVEGVGTMKQVFKQLWAEEGLFGLY 100
PL++++AR Q+ G++ L EGL G Y
Sbjct: 103 PLEVIKARTQISQKGSVINTISTLARSEGLKGFY 136
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 43.2 bits (97), Expect = 4e-05
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Frame = -2
Query: 465 IDLDKRRSKAALAR---EVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDE 295
+ LDK+ +AA R + ++ R G G Y+G +ASL V S L W LY ++
Sbjct: 190 LQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLG-VGESTLQWVLYEKFKHA 248
Query: 294 L----LKISPVWVSHLLIQCVAXXXXXXXXXXXTN--------PLDIVRARL-QVEGV-G 157
+ L+ + + + V P ++VR RL Q + G
Sbjct: 249 VAIRQLRRKELGIQETIYDKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLRQSPSING 308
Query: 156 TMK-----QVFKQLWAEEGLFGLYAKGLSA---RLVQSACFSF 52
T K Q FK +W E+G+ GLY GL+A R+V +AC F
Sbjct: 309 TPKYTGLIQCFKLVWMEQGIVGLYG-GLTAHLLRVVPNACILF 350
Score = 28.7 bits (61), Expect = 0.86
Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 8/207 (3%)
Frame = -2
Query: 618 PKWKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGR-TGGVSTTINPLGIDLDKRRS 442
P FI GG A ++G P DV+ L K R + + +PL
Sbjct: 47 PPLSHFIAGGVAGMLGAIATAPLDVVKTRLQ-SDFYKDRFLKQTAKSKSPLTAAYRHFMD 105
Query: 441 KAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSH 262
+ + V V G +RG +L +P ++ + Y + L + +
Sbjct: 106 TCIILKNVKV----HEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQEN 161
Query: 261 LLIQCVAXXXXXXXXXXXTNPLDIVRARLQVEGVGTMKQVFK-------QLWAEEGLFGL 103
I +A TNP+ +V+ RLQ++ ++ + EG GL
Sbjct: 162 SQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGL 221
Query: 102 YAKGLSARLVQSACFSFSIILGYESIK 22
Y KGLSA L+ + +L YE K
Sbjct: 222 Y-KGLSASLLGVGESTLQWVL-YEKFK 246
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 408 VYRQHGPLGYYRGYTASLAAYVPNSALWWALY 313
V+ + G +G Y G TA L VPN+ + + Y
Sbjct: 322 VWMEQGIVGLYGGLTAHLLRVVPNACILFGSY 353
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.9 bits (79), Expect = 0.006
Identities = 27/105 (25%), Positives = 49/105 (46%)
Frame = -2
Query: 627 DISPKWKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRTGGVSTTINPLGIDLDKR 448
D++ K F+GG I+GQT+ P DVL + V + GI + +
Sbjct: 223 DLTAFQKLFLGG-FTGIIGQTLTFPADVLRRRFQVNRIP--------------GIGHNYK 267
Query: 447 RSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 313
K+A+ +Y+ G G++RGY++++ +P ++ W Y
Sbjct: 268 NIKSAI-----FHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTY 307
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 35.9 bits (79), Expect = 0.006
Identities = 45/192 (23%), Positives = 73/192 (38%), Gaps = 2/192 (1%)
Frame = -2
Query: 705 LSSFQIISGVFYISTYEGVRFELGKYDISPK--WKSFIGGGCASIVGQTIIVPFDVLSQH 532
+SS + +G + + + F K + SP S + G CA + + PFDV+ Q
Sbjct: 81 ISSVIMGAGPSHAIYFSVLEFFKSKINASPDRPLASALAGACAITISDAFMTPFDVIKQR 140
Query: 531 LMVLGLVKGRTGGVSTTINPLGIDLDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLA 352
+ L R+ K+AL A V+R G +Y Y +A
Sbjct: 141 M----------------------QLPSRKYKSAL--HCATTVFRNEGLGAFYISYPTCIA 176
Query: 351 AYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXXXXXXXTNPLDIVRARLQ 172
+P +A+ A Y L +P V ++ T PLD+V+ LQ
Sbjct: 177 MSIPFTAIQVATYDTCMSFL---NPNAVYDPTSHIISGGLSGAIASSLTTPLDVVKTLLQ 233
Query: 171 VEGVGTMKQVFK 136
G ++ +V K
Sbjct: 234 TRGSSSIPEVRK 245
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 34.7 bits (76), Expect = 0.013
Identities = 23/99 (23%), Positives = 40/99 (40%)
Frame = -2
Query: 609 KSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRTGGVSTTINPLGIDLDKRRSKAAL 430
K I GG A + ++ P DV+ GG +T + LG L R+
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMV--LGGTLSSMRT---- 60
Query: 429 AREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 313
++ G G YRG + Y+P+ ++++ +Y
Sbjct: 61 -------IFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVY 92
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 34.7 bits (76), Expect = 0.013
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -2
Query: 201 PLDIVRARLQVEGVGTMKQVFKQLWAEEGLFGLYAKGLSARLVQSACFSFSI-ILGYESI 25
PLD ++ R Q T++ F+ EGL GLY +GL+ L+ SA S S+ Y+S+
Sbjct: 37 PLDSIKVRQQTYNFPTIRSCFQNAVKNEGLKGLY-RGLTLPLI-SATLSRSVSFTVYDSL 94
Query: 24 K 22
K
Sbjct: 95 K 95
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 34.3 bits (75), Expect = 0.017
Identities = 59/235 (25%), Positives = 83/235 (35%), Gaps = 20/235 (8%)
Frame = -2
Query: 663 TYEGVRFELGKYDISPKWK---SFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRTGG 493
TYE ++ LG S S++ GG A V Q I P D L + L +G+ G
Sbjct: 209 TYEAMKRVLGISSSSENHSPLYSYLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQHGK 268
Query: 492 VSTTINPLGIDLDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSAL----- 328
N A +Y+ G GYYRG + P SA
Sbjct: 269 SIILSN-------------------AKELYKSVGIRGYYRGVLVGILGMFPYSATDLGTF 309
Query: 327 -----WWALYTAYQDELLKISPVWVSHLLIQCVAXXXXXXXXXXXTNPLDIVRARLQVEG 163
W A +D + V + + L+ PL+++R RLQ +G
Sbjct: 310 EGLKRTWIGILASRDNV-DPQDVKLPNGLVMAFGALSGSTGATIVF-PLNVIRTRLQTQG 367
Query: 162 VGT-------MKQVFKQLWAEEGLFGLYAKGLSARLVQSACFSFSIILGYESIKR 19
F + EG GLY KGLS L++ A L YE+ K+
Sbjct: 368 TSAHPATYDGFIDCFYKTTKNEGFRGLY-KGLSPNLLKVAPSVAISYLVYENCKK 421
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 33.1 bits (72), Expect = 0.040
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = -2
Query: 423 EVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCV 244
+V + YR G G YRG+ S+ V L++ +Y + +L + P+ + L +
Sbjct: 180 DVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVL-VGPL-EGNFLASFL 237
Query: 243 AXXXXXXXXXXXTNPLDIVRARLQVEGVGTMK-----QVFKQLWAEEGLFGLYAKGLSAR 79
+ PLD +R R+ + +K + +Q+ A+EG + KG A
Sbjct: 238 LGWAVTTGSGVASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFF-KGAGAN 296
Query: 78 LVQ 70
+++
Sbjct: 297 ILR 299
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 30.7 bits (66), Expect = 0.21
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 612 WKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRT 499
W + G A + GQT+ PF+V + + + G+ K ++
Sbjct: 237 WPELLCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKS 274
Score = 29.5 bits (63), Expect = 0.49
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = -2
Query: 408 VYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKISPVWVSHLLIQCVAXXXX 229
+Y +G G Y+G+TA+L P + + + Y + L++ P +H + ++
Sbjct: 69 IYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIR-DPEHETHAR-RFLSGSLA 126
Query: 228 XXXXXXXTNPLDIVRARL-QVEGVG---TMKQVFKQLWAE 121
T PL+++R RL + G T+ QV K ++ E
Sbjct: 127 GTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHE 166
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.49
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 618 PKWKSFIGGGCASIVGQTIIVPFDVLSQHLMV 523
P W + GG +S++ + +I PFDV+ + +
Sbjct: 15 PVWHYTLAGGISSVICRFMIAPFDVIKIRMQI 46
Score = 25.8 bits (54), Expect = 6.1
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 426 REVAVRVYRQHGPLGYYRGYTASLAAYVPN--SALWWALYTAY 304
++ + +YR G G YRG + S+ P LW + + Y
Sbjct: 231 KDCFLSIYRNSGIKGLYRGLSVSMLKVAPGRYECLWLSCHFYY 273
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.8 bits (54), Expect(2) = 0.62
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 423 EVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 313
+ A +Y + G G+YRG+ L P +A+ + +Y
Sbjct: 256 QCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVTFYVY 292
Score = 21.8 bits (44), Expect(2) = 0.62
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = -2
Query: 621 SPKWKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLVKGRT 499
+P WK + G A PFD++ + G + T
Sbjct: 210 TPGWKLCVFGAGAGYAMWLAAYPFDIVKSKIQTDGFLSKAT 250
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.1 bits (62), Expect = 0.65
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 459 LDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWALY 313
L RS + ++ +R G LG+Y+G+ L VP + + + +Y
Sbjct: 214 LQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVY 262
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +3
Query: 285 SSKVHPGTPCT--EPTTAPSWARRPPGTP-CNPC 377
++ +P CT + T P W R P G P CN C
Sbjct: 626 ANATNPTPTCTNCQTRTTPLWRRSPDGQPLCNAC 659
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +2
Query: 104 SPNRPSSAQSCLNTCFIVPTPSTCNLALTMSRGLVSIVVVKPPRVPATHCISRCDTHTGD 283
SP+ SS+ S +T PTPST +L ++ S + + + S T++
Sbjct: 610 SPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSS 669
Query: 284 IFKSSS 301
+ SSS
Sbjct: 670 VIPSSS 675
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 201 PLDIVRARLQVEGVGTMKQV--FKQLWAEEGLFGLYAKGL 88
PLD+++ R QV + FK + ++EGL GLY G+
Sbjct: 43 PLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGM 82
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 3.5
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Frame = -2
Query: 408 VYRQHGPLGYYRGYTASLAAYVPNSALWWALYTAYQDELLKI----SPV-----WVSHL- 259
++++ G G++RG+ + P++ L+ Y + L K+ SP V H
Sbjct: 151 IWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSSSVQGTVPHRN 210
Query: 258 LIQCVAXXXXXXXXXXXTNPLDIVRARLQVEG--VGTMKQVFKQLWAEEGLFGLYAKGLS 85
++ ++ TNP D+++ R+Q+E K ++A EG G + G
Sbjct: 211 IVNVMSGLISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRG-FLDGFF 269
Query: 84 ARLVQSACFS 55
R+++ + S
Sbjct: 270 LRVLRKSISS 279
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 501 SYPSPGLAPSGAGSARQT 554
S P G +PSGA SARQT
Sbjct: 131 SSPYGGYSPSGASSARQT 148
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -2
Query: 201 PLDIVRARLQVEGVGTMKQVFKQLWAEEGLFGLY 100
PL++ + ++ TM Q K + + G+ G Y
Sbjct: 31 PLEVTKVQMAANRTQTMAQAIKAIMSRGGILGFY 64
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = -2
Query: 366 TASLAAYVPNSALWWALYTAYQDELLKIS 280
+A+L+ Y+ +A+WWA+ T E++ ++
Sbjct: 76 SAALSFYLDTNAVWWAIRTITHLEIVGLN 104
>SPBP26C9.03c |||iron ion transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 584
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 612 WKSFIGGGCASIVGQTIIVPFDVLSQHLMVLGLV 511
+KS GG + +G +P VL ++LGL+
Sbjct: 480 YKSTFGGSLSQWIGWLCALPISVLFSVFVILGLI 513
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 25.4 bits (53), Expect = 8.0
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 468 GIDLDKRRSKAALAREVAVRVYRQHGPLGYYRGYTASLAAYVPNSALWWAL--YTAYQDE 295
GI +D+R + + ++A++ H PL + Y S N L W A D
Sbjct: 684 GITVDERGNSKLIEYDIALQPVSFHHPLHWLLVYLLSFYVERDNYKLLWTQLDLLAVTDH 743
Query: 294 LLKISPVWVSHL 259
L++ W+S +
Sbjct: 744 PLRVC-AWLSQM 754
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/56 (33%), Positives = 23/56 (41%)
Frame = +2
Query: 479 IVVLTPPVLPFTRPSTIRCWLSTSNGTIIVCPTMEAHPPPMNDFHFGLMSYFPNSN 646
I VLT P R S GTI E H PP+ +F+ +S PN N
Sbjct: 301 IEVLTHPFFDELRDPNCMYHCSRDEGTI------ERHLPPLFNFNLAELSIRPNLN 350
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 556 HYYRLPDDGSASAADERLPFWANVIFS*FKSHSFVRRYIE 675
HY ++PD G R N I F + F RRY++
Sbjct: 330 HYAKIPDAGHIPLRLPRAKALLNTITQNFGTLPFCRRYLD 369
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,699,370
Number of Sequences: 5004
Number of extensions: 53528
Number of successful extensions: 196
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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