Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13m16
         (799 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.6  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    25   3.6  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    25   3.6  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    24   6.3  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
 Frame = -2

Query: 339 WRMPLWKFYEDRVRDCHT-ADVANTGRDEFGDSPNCAAFLKQF 214
           W    W+FY  + +  HT   +   G      +  C  F  +F
Sbjct: 466 WPDSFWRFYNSKTKSTHTPKSITYKGATSANTNEMCNLFADRF 508


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 432 TLDGSACGCYTNSDELFCYLQSASSQTG 349
           TL   A GC+ + +E  C+  S  +++G
Sbjct: 184 TLQSLAGGCFPSGEESLCFFYSFVTRSG 211


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 432 TLDGSACGCYTNSDELFCYLQSASSQTG 349
           TL   A GC+ + +E  C+  S  +++G
Sbjct: 184 TLQSLAGGCFPSGEESLCFFYSFVTRSG 211


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 321 KFYEDRVRDCHTADVANTGRDEFGDSPNCAAFLKQFI 211
           K  +D V+ CH +   ++    +   P C A  K FI
Sbjct: 119 KLLDDTVKQCHESINVDSEFTRYVTKPVCKADAKAFI 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 890,386
Number of Sequences: 2352
Number of extensions: 19644
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)