Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13k23
(663 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1759|AAF58343.1| 1154|Drosophila melanogaster CG18368-P... 31 1.1
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P... 31 1.8
AY089377-1|AAL90115.1| 660|Drosophila melanogaster AT20011p pro... 30 3.2
AE014296-2783|AAF49427.1| 660|Drosophila melanogaster CG13032-P... 30 3.2
AY051835-1|AAK93259.1| 565|Drosophila melanogaster LD33852p pro... 29 4.3
AF468650-1|AAL78366.1| 565|Drosophila melanogaster acyl coenzym... 29 4.3
AF468649-1|AAL78365.1| 565|Drosophila melanogaster acyl coenzym... 29 4.3
AE014134-2792|AAF53574.3| 565|Drosophila melanogaster CG31991-P... 29 4.3
AE014134-2791|AAN10973.1| 565|Drosophila melanogaster CG31991-P... 29 4.3
AE014134-2790|AAN10972.1| 565|Drosophila melanogaster CG31991-P... 29 4.3
AE014134-2789|AAS64717.1| 615|Drosophila melanogaster CG31991-P... 29 4.3
AY050229-1|AAK84928.1| 486|Drosophila melanogaster SD01615p pro... 29 7.5
AF364549-3|AAK52056.1| 425|Drosophila melanogaster envelope pro... 29 7.5
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 28 9.9
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 28 9.9
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 28 9.9
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 28 9.9
>AE013599-1759|AAF58343.1| 1154|Drosophila melanogaster CG18368-PA
protein.
Length = 1154
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -1
Query: 291 KNKLNLNLITKCNEFKMNKNTSVRQLK---SESKGHSELLTENAMMEFDPMIKMKRDIL 124
K N L T+ NEF +N+N ++ LK E K E + +N +E K ++D+L
Sbjct: 650 KMSANEKLKTESNEFGLNRNCAIESLKDKCQEKKDFVEDVLKNMSLECKTSDKYEQDLL 708
>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
protein.
Length = 1333
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = -1
Query: 441 ESFFDMFSQSSN--HSLISFKNKA---DSQKHIVRIPLSDNTCLTTNRKVNSVQ 295
E D+ ++ N +IS NK D+Q + ++ NTC+T N K+N++Q
Sbjct: 281 EDLIDLKKRTENLQRLVISLTNKMANFDNQGSATSLSVTLNTCMTNNEKLNTIQ 334
>AY089377-1|AAL90115.1| 660|Drosophila melanogaster AT20011p
protein.
Length = 660
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -1
Query: 408 NHSLISFKNKADSQKHIVR-IPLSDNTCLTT--NRKVNSVQRKNKLNLNLITKCNEFKMN 238
N + K DS ++ +P+ + C ++ + K+ + +KN+ + + +
Sbjct: 80 NQEISDLKKSVDSLNEVLNSVPIDELRCNSSIASTKILELSKKNRQMRSELEQAKSRLGK 139
Query: 237 KNTSVRQLKSESKGHSELLTEN 172
K+ + +L+ E + H E L N
Sbjct: 140 KDAQIEKLEKELRAHEEKLQHN 161
>AE014296-2783|AAF49427.1| 660|Drosophila melanogaster CG13032-PA
protein.
Length = 660
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -1
Query: 408 NHSLISFKNKADSQKHIVR-IPLSDNTCLTT--NRKVNSVQRKNKLNLNLITKCNEFKMN 238
N + K DS ++ +P+ + C ++ + K+ + +KN+ + + +
Sbjct: 80 NQEISDLKKSVDSLNEVLNSVPIDELRCNSSIASTKILELSKKNRQMRSELEQAKSRLGK 139
Query: 237 KNTSVRQLKSESKGHSELLTEN 172
K+ + +L+ E + H E L N
Sbjct: 140 KDAQIEKLEKELRAHEEKLQHN 161
>AY051835-1|AAK93259.1| 565|Drosophila melanogaster LD33852p
protein.
Length = 565
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 212 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 261
>AF468650-1|AAL78366.1| 565|Drosophila melanogaster acyl coenzyme
A:diacylglycerolacyltransferase protein.
Length = 565
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 212 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 261
>AF468649-1|AAL78365.1| 565|Drosophila melanogaster acyl coenzyme
A:diacylglycerolacyltransferase protein.
Length = 565
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 212 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 261
>AE014134-2792|AAF53574.3| 565|Drosophila melanogaster CG31991-PC,
isoform C protein.
Length = 565
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 212 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 261
>AE014134-2791|AAN10973.1| 565|Drosophila melanogaster CG31991-PB,
isoform B protein.
Length = 565
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 212 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 261
>AE014134-2790|AAN10972.1| 565|Drosophila melanogaster CG31991-PA,
isoform A protein.
Length = 565
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 212 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 261
>AE014134-2789|AAS64717.1| 615|Drosophila melanogaster CG31991-PD,
isoform D protein.
Length = 615
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 242 ILNSLHLVIKFKFNLFLRCTEFTFLFVVKHVLSESGIRTMCFWESALFLK 391
I L L I+ + L C + + H S G T+CF+ S LFLK
Sbjct: 262 IAEGLGLFIQIVNIVVLVCLPVVTIHLKGHAFSLMGASTVCFFYSVLFLK 311
>AY050229-1|AAK84928.1| 486|Drosophila melanogaster SD01615p
protein.
Length = 486
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 197 PLLSLFNCLTEVFLFILNSLHLVIKFKFNLFLRCTEFTFLFVVKH 331
P+ + + + L LN LH +IKF + + C + T L VV H
Sbjct: 222 PIREILSVASVKVLQSLNILHFIIKFP-KIIMACNKVTILPVVHH 265
>AF364549-3|AAK52056.1| 425|Drosophila melanogaster envelope
protein protein.
Length = 425
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 197 PLLSLFNCLTEVFLFILNSLHLVIKFKFNLFLRCTEFTFLFVVKH 331
P+ + + + L LN LH +IKF + + C + T L VV H
Sbjct: 161 PIREILSVASVKVLQSLNILHFIIKFP-KIIMACNKVTILPVVHH 204
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -1
Query: 414 SSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRKVNSVQRKNKLNLNLITKCNEFKMNK 235
S N ++ + D + +R L +TT+ + N + +KN+ + + + E K ++
Sbjct: 2293 SVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQ 2352
Query: 234 NTSVRQ-LKSESKGHSELLTENAMMEFDPMIKMK 136
++ LK LL N E +K K
Sbjct: 2353 LERHKELLKKNILRKRSLLERNLQSEIHEDVKTK 2386
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 28.3 bits (60), Expect = 9.9
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 312 KVNSVQRKNKLNLNLITKCNEFKMNKNTSVRQLKSESKGHSELLTENAMMEFDP 151
+VNSV+R N+L L NE + + N + + + +GHS N++ F P
Sbjct: 791 RVNSVERPNRLELTY--SLNEEETDTNAIYLEEREKVEGHSGDREYNSLPPFYP 842
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -1
Query: 414 SSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRKVNSVQRKNKLNLNLITKCNEFKMNK 235
S N ++ + D + +R L +TT+ + N + +KN+ + + + E K ++
Sbjct: 2293 SVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQ 2352
Query: 234 NTSVRQ-LKSESKGHSELLTENAMMEFDPMIKMK 136
++ LK LL N E +K K
Sbjct: 2353 LERHKELLKKNILRKRSLLERNLQSEIHEDVKTK 2386
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = -1
Query: 414 SSNHSLISFKNKADSQKHIVRIPLSDNTCLTTNRKVNSVQRKNKLNLNLITKCNEFKMNK 235
S N ++ + D + +R L +TT+ + N + +KN+ + + + E K ++
Sbjct: 2273 SVNEEALTPSRQTDDTEWKIRTSLRRPNAMTTSSQFNRILKKNRSKNDEVAELGEQKQSQ 2332
Query: 234 NTSVRQ-LKSESKGHSELLTENAMMEFDPMIKMK 136
++ LK LL N E +K K
Sbjct: 2333 LERHKELLKKNILRKRSLLERNLQSEIHEDVKTK 2366
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,080,887
Number of Sequences: 53049
Number of extensions: 471076
Number of successful extensions: 1123
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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