Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13k06
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2525|ABC66137.1|  279|Drosophila melanogaster CG33986-P...    36   0.040
AY118821-1|AAM50681.1|  212|Drosophila melanogaster GH25962p pro...    31   1.5  
AE013599-1570|AAF58469.2|  212|Drosophila melanogaster CG30052-P...    31   1.5  
AY118335-1|AAM48364.1|  440|Drosophila melanogaster LD24788p pro...    29   6.0  
AE013599-3324|AAF46795.1|  440|Drosophila melanogaster CG6437-PA...    29   6.0  

>AE014296-2525|ABC66137.1|  279|Drosophila melanogaster CG33986-PA
           protein.
          Length = 279

 Score = 36.3 bits (80), Expect = 0.040
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
 Frame = -3

Query: 253 DKWTELNSAFK---TVILNAKVHCKLNYQHLFP-MEPCEFYNLHGCIRNFVNL-GCPVY- 92
           D  T  NS F    T I +  +HC    QHL+P M+ CEF+    C++   +L  CP Y 
Sbjct: 194 DMPTNGNSGFPSGGTAISSDLIHCPAYGQHLYPHMQRCEFFIY--CVKGHASLQQCPFYY 251

Query: 91  ---MPTKECQ 71
              + TK CQ
Sbjct: 252 FFDIATKSCQ 261


>AY118821-1|AAM50681.1|  212|Drosophila melanogaster GH25962p
           protein.
          Length = 212

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 169 FPMEPCEFYNLHGCIRNFVNLGCP--VYMPTKECQEVKEFNEECR 41
           FPM P +  +L GC+   +   CP  +   +++C ++KEF  +C+
Sbjct: 156 FPMCPHDAGHLMGCVFRNMMKNCPDSIRNDSQQCTDMKEFFTKCK 200


>AE013599-1570|AAF58469.2|  212|Drosophila melanogaster CG30052-PA
           protein.
          Length = 212

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 169 FPMEPCEFYNLHGCIRNFVNLGCP--VYMPTKECQEVKEFNEECR 41
           FPM P +  +L GC+   +   CP  +   +++C ++KEF  +C+
Sbjct: 156 FPMCPHDAGHLMGCVFRNMMKNCPDSIRNDSQQCTDMKEFFTKCK 200


>AY118335-1|AAM48364.1|  440|Drosophila melanogaster LD24788p
           protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
 Frame = -3

Query: 364 FVRKAVTGCDHWRCILKKYNFLTPNGLLDDDKYYAHLDKWTELNSAF--KTVILNAKVHC 191
           F+ ++VT    W+  +     L  +GL D   + A L +W +L  A    T++L     C
Sbjct: 239 FIARSVTRLG-WKMRISNQPALQNSGLCDIGSFQARLIRWAKLRVAMVPTTILLEPLSEC 297

Query: 190 KL-------NYQHLFPMEPCEFYNLH 134
            +       +   LF  +P  FY +H
Sbjct: 298 MILGAIAAWSASVLFSWDPLVFYLVH 323


>AE013599-3324|AAF46795.1|  440|Drosophila melanogaster CG6437-PA
           protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
 Frame = -3

Query: 364 FVRKAVTGCDHWRCILKKYNFLTPNGLLDDDKYYAHLDKWTELNSAF--KTVILNAKVHC 191
           F+ ++VT    W+  +     L  +GL D   + A L +W +L  A    T++L     C
Sbjct: 239 FIARSVTRLG-WKMRISNQPALQNSGLCDIGSFQARLIRWAKLRVAMVPTTILLEPLSEC 297

Query: 190 KL-------NYQHLFPMEPCEFYNLH 134
            +       +   LF  +P  FY +H
Sbjct: 298 MILGAIAAWSASVLFSWDPLVFYLVH 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,404,102
Number of Sequences: 53049
Number of extensions: 578891
Number of successful extensions: 1161
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)