Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13k05
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 99 2e-21
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 99 2e-21
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 99 2e-21
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 99 2e-21
AF036685-1|AAB88308.2| 369|Caenorhabditis elegans Lateral-signa... 98 6e-21
AC026301-12|AAK68892.1| 227|Caenorhabditis elegans Hypothetical... 90 2e-18
Z78419-4|CAB01700.1| 226|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 76 4e-14
U41534-8|AAD31049.1| 221|Caenorhabditis elegans Hypothetical pr... 72 6e-13
U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z29121-2|CAA82388.2| 294|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AL022716-3|CAA18771.1| 272|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 40 0.002
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 35 0.062
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 35 0.062
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 35 0.062
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 35 0.062
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 35 0.062
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 35 0.062
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 35 0.062
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 35 0.062
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 35 0.062
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 35 0.062
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 35 0.062
Z68315-11|CAA92677.1| 150|Caenorhabditis elegans Hypothetical p... 35 0.082
AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical... 33 0.19
AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical ... 33 0.19
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.3
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 30 1.8
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical ... 30 2.3
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 4.1
AF000193-2|AAB52889.1| 184|Caenorhabditis elegans Hypothetical ... 29 4.1
AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical ... 29 5.4
Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 7.1
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 28 7.1
Z81109-10|CAB03242.2| 290|Caenorhabditis elegans Hypothetical p... 28 9.4
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 9.4
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 9.4
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 9.4
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 9.4
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 9.4
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 28 9.4
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 9.4
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 9.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 9.4
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 99 bits (238), Expect = 2e-21
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = -2
Query: 570 IIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQTNL 391
I P +YL + + D+ +L +L+I+ V+ ++ PKS D N + I D+ Q L
Sbjct: 24 ITPNIYLGSQIDSLDETMLDALDISVVINLSMT-CPKSVCIKEDKNFMRIPVNDSYQEKL 82
Query: 390 LPYFPMANSFIDEGLQAGN-VLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRR 214
PYFPMA F+++ +AG L+HC G+SRS TL I+YIM K+ + AY YV++RR
Sbjct: 83 SPYFPMAYEFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAYRYVKERRP 142
Query: 213 FINPNPGFVKQLREYHRL 160
I+PN F+ QL EY +
Sbjct: 143 SISPNFNFMGQLLEYENV 160
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 99 bits (238), Expect = 2e-21
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = -2
Query: 570 IIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQTNL 391
I P +YL + + D+ +L +L+I+ V+ ++ PKS D N + I D+ Q L
Sbjct: 128 ITPNIYLGSQIDSLDETMLDALDISVVINLSMT-CPKSVCIKEDKNFMRIPVNDSYQEKL 186
Query: 390 LPYFPMANSFIDEGLQAGN-VLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRR 214
PYFPMA F+++ +AG L+HC G+SRS TL I+YIM K+ + AY YV++RR
Sbjct: 187 SPYFPMAYEFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAYRYVKERRP 246
Query: 213 FINPNPGFVKQLREYHRL 160
I+PN F+ QL EY +
Sbjct: 247 SISPNFNFMGQLLEYENV 264
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 99 bits (238), Expect = 2e-21
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = -2
Query: 570 IIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQTNL 391
I P +YL + + D+ +L +L+I+ V+ ++ PKS D N + I D+ Q L
Sbjct: 179 ITPNIYLGSQIDSLDETMLDALDISVVINLSMT-CPKSVCIKEDKNFMRIPVNDSYQEKL 237
Query: 390 LPYFPMANSFIDEGLQAGN-VLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRR 214
PYFPMA F+++ +AG L+HC G+SRS TL I+YIM K+ + AY YV++RR
Sbjct: 238 SPYFPMAYEFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAYRYVKERRP 297
Query: 213 FINPNPGFVKQLREYHRL 160
I+PN F+ QL EY +
Sbjct: 298 SISPNFNFMGQLLEYENV 315
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 99 bits (238), Expect = 2e-21
Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = -2
Query: 570 IIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQTNL 391
I P +YL + + D+ +L +L+I+ V+ ++ PKS D N + I D+ Q L
Sbjct: 179 ITPNIYLGSQIDSLDETMLDALDISVVINLSMT-CPKSVCIKEDKNFMRIPVNDSYQEKL 237
Query: 390 LPYFPMANSFIDEGLQAGN-VLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRR 214
PYFPMA F+++ +AG L+HC G+SRS TL I+YIM K+ + AY YV++RR
Sbjct: 238 SPYFPMAYEFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAYRYVKERRP 297
Query: 213 FINPNPGFVKQLREYHRL 160
I+PN F+ QL EY +
Sbjct: 298 SISPNFNFMGQLLEYENV 315
>AF036685-1|AAB88308.2| 369|Caenorhabditis elegans
Lateral-signal-induced phosphataseprotein 1 protein.
Length = 369
Score = 98.3 bits (234), Expect = 6e-21
Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Frame = -2
Query: 558 LYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQTNLLPYF 379
LYL NA A +++VL+ +I+HV+ + +N LP + D ++ L I A D NL +F
Sbjct: 192 LYLGNAETAKNRDVLKKYSISHVINVTSN-LPNTFEEDPNMRYLRISADDNASHNLTKFF 250
Query: 378 PMANSFIDEGLQAGNV-LVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRRFINP 202
P A SFID+ + + LVHC G+SRS T+ +AY+M+ T + AY +V++R I P
Sbjct: 251 PEAISFIDDARRNDSACLVHCLAGISRSVTICLAYLMKTEMCTLDSAYEWVQKRNASIAP 310
Query: 201 NPGFVKQLREYHRL 160
N F+ QL +Y ++
Sbjct: 311 NFHFMGQLTDYEKM 324
>AC026301-12|AAK68892.1| 227|Caenorhabditis elegans Hypothetical
protein Y54F10BM.13 protein.
Length = 227
Score = 89.8 bits (213), Expect = 2e-18
Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = -2
Query: 603 IDLCTQSCYSQIIPGLYLSNARAAADKNVLRSLNITHVLTIAA---NRLPKSTFYDTDIN 433
+DL + +P L + AAD +L + ITH++ + N PK Y
Sbjct: 75 VDLEPDLVVGEALPDLLFGSQDVAADLPILENRKITHIVNVGTGIPNHFPKKFEY----- 129
Query: 432 TLFIRAYDTPQTNLLPYFPMANSFIDEGLQ-AGNVLVHCHFGVSRSATLVIAYIMEKYKL 256
L I D P+T ++ YF FID+ Q G V +HC+ G+SRSAT V+AY+M+ K+
Sbjct: 130 -LQIDILDLPETRIIDYFERVFEFIDKVRQNEGIVFIHCNAGISRSATFVVAYLMKNLKI 188
Query: 255 TFEQAYVYVRQRRRFINPNPGFVKQLREYHRL 160
+ +A R+ R I PN GF +QL+EY +
Sbjct: 189 SCREAMDKCRETRS-IRPNTGFAQQLKEYEAI 219
>Z78419-4|CAB01700.1| 226|Caenorhabditis elegans Hypothetical
protein F26A3.4 protein.
Length = 226
Score = 77.0 bits (181), Expect = 2e-14
Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = -2
Query: 576 SQIIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQT 397
S+I+PGL++ +A K+ ++ ITH++ A +P DI + DTPQT
Sbjct: 15 SEIVPGLFICGV-SALSKDEMKKHKITHIIN-ATTEVPNLRSLG-DIQRTKLWLEDTPQT 71
Query: 396 NLLPYFPMANSFIDEGL-QAGNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQR 220
+ P+ + + I + G VLVHC GVSRSA++ +A++++ +AY ++ +
Sbjct: 72 YIYPHLELQSDQIQALIADGGKVLVHCVAGVSRSASICLAFLLKYRCRNLREAYHLMKSK 131
Query: 219 RRFINPNPGFVKQLREYHR 163
R + PN GF +QL Y +
Sbjct: 132 RSMVRPNLGFWRQLIAYEQ 150
>Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical
protein C04F12.8 protein.
Length = 272
Score = 75.8 bits (178), Expect = 4e-14
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Frame = -2
Query: 576 SQIIPGLYLSNARAAA-DKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQ 400
S+I LYLS A DK R +N+ + A P + Y ++T+ IR D P
Sbjct: 12 SEINDHLYLSGAGVLKPDKIKQRKINM---IVNATTEEPST--YMQGVDTMKIRIEDHPY 66
Query: 399 TNLLPYFPM-ANSFIDEGLQAGNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQ 223
L +F + A+ + + G LVHC GVSRSA+LV+ Y+++ +T QAY YV+
Sbjct: 67 ARLNEHFDVVADKIRNVKERGGKTLVHCMAGVSRSASLVMIYLVKHEHMTLRQAYHYVKA 126
Query: 222 RRRFINPNPGFVKQLREYHR 163
R I PN GF KQ+ +Y +
Sbjct: 127 ARPIIRPNVGFWKQMVDYEK 146
>U41534-8|AAD31049.1| 221|Caenorhabditis elegans Hypothetical
protein C16A3.2 protein.
Length = 221
Score = 71.7 bits (168), Expect = 6e-13
Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = -2
Query: 576 SQIIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDI-NTLFIRAYDTPQ 400
S+I+P LYLS + + +L+ NIT V+ ++ + I N F DT
Sbjct: 45 SEILPNLYLSGRTVSQNSELLKEKNITTVINVSDREVVNYKNNQKFIKNYRFYAMSDTAS 104
Query: 399 TNLLPYFPMANSFI-DEGLQAGNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQ 223
A I D + VLVHC GVSRSATLV Y++ + + A ++
Sbjct: 105 AKFDGIIEEAVRIIHDSRSKEEGVLVHCFLGVSRSATLVAFYLISALSINWRDAVDFIHH 164
Query: 222 RRRFINPNPGFVKQLREY 169
RR NPN GF+ QL+ Y
Sbjct: 165 RRFSANPNFGFLHQLKVY 182
>U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical
protein F13D11.3 protein.
Length = 186
Score = 69.3 bits (162), Expect = 3e-12
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Frame = -2
Query: 576 SQIIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQT 397
+Q+ P L+L+ ++L+ NITH + N K ++ + + D
Sbjct: 12 TQVRPHLFLAGY-GCITPSLLKQYNITHGVD-CTNLKTKPI---KGLDRIEVPVDDNTLA 66
Query: 396 NLLPYFPMANSFIDEGLQAG-NVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQR 220
+ YF +I++ Q G N +++C GVSRSATL I Y+M L+ E+AY+ V Q
Sbjct: 67 KITQYFEPVVKYIEDAKQQGHNTVIYCAAGVSRSATLTIVYLMVTENLSLEEAYLQVNQV 126
Query: 219 RRFINPNPGFVKQLREYHR 163
R I+PN GF +Q+ ++ +
Sbjct: 127 RPIISPNIGFWRQMIDFEK 145
>Z29121-2|CAA82388.2| 294|Caenorhabditis elegans Hypothetical
protein ZK757.2 protein.
Length = 294
Score = 58.8 bits (136), Expect = 4e-09
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = -2
Query: 576 SQIIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFY-DTDINTLFIRAYDTPQ 400
SQI P LY+S A + + + R + N +P + + + D
Sbjct: 15 SQIRPYLYVSGLAALSPRVLSR-------FCVCINLIPGFRLSAPPHMKVVHLPLQDNET 67
Query: 399 TNLLPYFPMANSFIDEGLQ-AGNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQ 223
T+L P++ I+E + AG L+ C G+SRSAT IAY+M+ K T +Y V+
Sbjct: 68 TDLSPHWANVYKEIEEARKGAGRALLLCAMGISRSATFGIAYVMQYEKKTLHDSYKAVQL 127
Query: 222 RRRFINPNPGFVKQL 178
R I PN GF +QL
Sbjct: 128 ARNIICPNVGFFQQL 142
>AL022716-3|CAA18771.1| 272|Caenorhabditis elegans Hypothetical
protein C24F3.2 protein.
Length = 272
Score = 57.2 bits (132), Expect = 1e-08
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Frame = -2
Query: 591 TQSCYSQIIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAY 412
T++ Y +P + ++ KN +I VLT+ + + ++ F+
Sbjct: 5 TENLYLAQLPMIVGPTSKQEFSKN-----DIKRVLTLTTEPISEKQKIG-GVDYKFLHLL 58
Query: 411 DTPQTNLLP--YFPMANSFIDEGLQAG-NVLVHCHFGVSRSATLVIAYIMEKYKLTFEQA 241
D P +L A +I+EG++ NV VHC VSRS ++ AY+M K + E+A
Sbjct: 59 DMPDEPILDNAILETAVLYINEGVEKEENVGVHCLAAVSRSVSICAAYLMYKNQWPVEKA 118
Query: 240 YVYVRQRRRFINPNPGFVKQLREYHRLGYDVSSFQ 136
+ R+ I PN GF+ QL+ + R G S+ Q
Sbjct: 119 LKMIESVRKTIGPNAGFLAQLKIWERSGMSFSADQ 153
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -2
Query: 360 IDEGLQAGNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRRFINPNPGFVKQ 181
+D L G + VHCH G R+ ++ A++M ++ QA VR RR + VK
Sbjct: 164 VDFALSHGKIAVHCHAGHGRTGMVIAAWMMYALGMSPSQAVDTVRSRRAKAVQSKEQVKT 223
Query: 180 LREYHRL 160
L E+ L
Sbjct: 224 LHEFRLL 230
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 35.1 bits (77), Expect = 0.062
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 339 GNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVR 226
G V VHC G+ R+ TL+ ++M++Y LT + ++R
Sbjct: 289 GGVAVHCKAGLGRTGTLIACWMMKEYGLTAGECMGWLR 326
>Z68315-11|CAA92677.1| 150|Caenorhabditis elegans Hypothetical
protein F28C6.8 protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -2
Query: 372 ANSFIDEGLQAGN-VLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRRFINPNP 196
A FI+ G V VHC G +RSAT+ Y+M+ A+ +++ +R +
Sbjct: 67 AVEFIESVASKGKTVYVHCKAGRTRSATVATCYLMKSRNWMSNVAWEFLKDKRHQVLLRN 126
Query: 195 GFVKQLREYHR 163
+ + EY R
Sbjct: 127 AHWRTVNEYRR 137
>AF067219-10|AAC17031.1| 753|Caenorhabditis elegans Hypothetical
protein R12E2.10 protein.
Length = 753
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = -2
Query: 333 VLVHCHFGVSRSATLVIAYIM-------EKYKLTFEQAYVYVRQRRRFINPNP 196
V++H H GVSR+A LV A I YK ++A ++RQRR F P
Sbjct: 596 VVIHDHLGVSRAACLVAAEIAICSLLRGPTYKYPVQRAVQFLRQRRPFSIETP 648
>AF003133-2|AAB54136.1| 753|Caenorhabditis elegans Hypothetical
protein T21E3.1 protein.
Length = 753
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = -2
Query: 333 VLVHCHFGVSRSATLVIAYIM-------EKYKLTFEQAYVYVRQRRRFINPNP 196
V++H H GVSR+A LV A I YK ++A ++RQRR F P
Sbjct: 596 VVIHDHLGVSRAACLVAAEIAICSLLRGPTYKYPVQRAVQFLRQRRPFSIETP 648
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/99 (23%), Positives = 39/99 (39%)
Frame = -3
Query: 611 TTRSTSALNLATARSFLASI*AMPVLQPTKMSFEASTSRTCSPLRRIASRNLLSMIPTST 432
TT +T+ T + + PT + A T+ T +P + + +PT+T
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT-TAPTTTTTTPTTTTTTPTTTTTVPTTT 220
Query: 431 PCSLGPTTLLRPISCPTSQWPTPSLMRAYRRATCSSTVT 315
+ PTT + PT+ TP+ T +T T
Sbjct: 221 TTT--PTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTT 257
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 361 EGVGHWEVGQEIG-LRSVVGPNEQGVDVGIIESRFREAIRRNGEHVRDVEASKDIFVGCS 537
EG GH E G LRS GPN + V E R R+G + D S+D++ S
Sbjct: 204 EGAGHHSPRFENGTLRSQRGPNSP-IHVQT-EHDGRSVSSRSGSRLNDSPGSRDVYSSHS 261
Query: 538 TGIAQIEARNDLA 576
+ ++RN L+
Sbjct: 262 YSYHRSDSRNRLS 274
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -1
Query: 514 SKPQHHARAHHCGESP--PEIYFL*YRHQ 434
S PQ+H HH +SP P+ YF Y HQ
Sbjct: 23 STPQYHNHHHHHHQSPTYPQSYFNPYSHQ 51
>AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical
protein Y102A5C.16 protein.
Length = 200
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -3
Query: 506 STSRTCSPLRRIASRNL-LSMIPTSTPCSLGPTTLLRPISCPT--SQWPTPS 360
S +R+C P ++I + + ++ T+T + TT PI CPT Q+ PS
Sbjct: 11 SVARSCIPTQQIETTSAPITTTTTTTTTTTTSTTTTTPIPCPTGWEQFERPS 62
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = -3
Query: 617 PSTTRSTSALNLATARSFLA-SI*AMPVLQPTKMSFEASTSRTCSPLRRIASRNLLSMIP 441
PST ++T+ + RS + L+P + +AST+RT S S ++ P
Sbjct: 104 PSTLKTTTKPVITATRSTARITTTKASTLEPPEAPTKASTARTISTTETTTSPPTTTVTP 163
Query: 440 TSTPCSLG---PTTLLRPISCPTSQWPTPSLMRAYRRATCSSTVT 315
+T S TT P + T+ P + A R T +T +
Sbjct: 164 RTTRSSTARTVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTS 208
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 336 NVLVHCHFGVSRSATLV 286
NVLVHC GV R+ TLV
Sbjct: 1196 NVLVHCSVGVGRTGTLV 1212
>AF000193-2|AAB52889.1| 184|Caenorhabditis elegans Hypothetical
protein T20B6.1 protein.
Length = 184
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -2
Query: 336 NVLVHCHFGVSRSATLV-IAYIME 268
NVLVHC GV R+ TLV I Y +E
Sbjct: 153 NVLVHCSAGVGRTGTLVAIKYGIE 176
>AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical
protein Y80D3A.3 protein.
Length = 234
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 526 QKCPSKPQHHARAHHCGESPPEIYFL*YRHQ 434
Q PS H AHH G PP FL ++HQ
Sbjct: 107 QLSPSSFPHPMVAHHAGFIPPPPSFLHHQHQ 137
>Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical
protein T19C4.5 protein.
Length = 364
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 637 EAGERHDRVGDGEESDNEGAFEHHKEQSSRTNHANNNEDFI 759
+ G+ + DG+ES+N HH+ +S + F+
Sbjct: 324 QMGDSAETESDGQESNNHSHNHHHRSTTSSSRFTEQQSQFV 364
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 7.1
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = -3
Query: 614 STTRSTSALNLATARSFLASI*AMPV-LQPTKMSFE--ASTSRTCSPLRRIASRNLLSMI 444
+TT TS + TA S S + ++ T +F ASTS + + + +S + S
Sbjct: 293 TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSS- 351
Query: 443 PTSTPCSLG-PTTLLRPISCPTSQWPTPSLMRAYRRATCSSTVT 315
P+ST S PTT I+ S P ++ T S+T T
Sbjct: 352 PSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFT 395
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 7.1
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = -3
Query: 614 STTRSTSALNLATARSFLASI*AMPV-LQPTKMSFE--ASTSRTCSPLRRIASRNLLSMI 444
+TT TS + TA S S + ++ T +F ASTS + + + +S + S
Sbjct: 293 TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSS- 351
Query: 443 PTSTPCSLG-PTTLLRPISCPTSQWPTPSLMRAYRRATCSSTVT 315
P+ST S PTT I+ S P ++ T S+T T
Sbjct: 352 PSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFT 395
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 336 NVLVHCHFGVSRSATLV 286
NVLVHC GV R+ TLV
Sbjct: 984 NVLVHCSEGVGRTGTLV 1000
>Z81109-10|CAB03242.2| 290|Caenorhabditis elegans Hypothetical
protein R10D12.4 protein.
Length = 290
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +1
Query: 1 LLLLIGYKLSNQHDDWNQDSNHYCR*RSYLVLVFPRFNLHVSFKSLKATHVVAQPMVFSE 180
+++ I ++SN + + DS H+ + R+ V +F L F + PM+F +
Sbjct: 192 VIIFIKIRISNNSVEQSIDSKHFQKLRARERSVAVQFALVSIFSIISFASFKVVPMIFGK 251
Query: 181 LLHESRV 201
L ES +
Sbjct: 252 LNTESNI 258
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 729 SARGLLFVMFKSAFIVAFLTIPNPVVALSSFKNWSRKAF 613
S R L V A V+FL P+ ++ +F WS++AF
Sbjct: 344 SPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAF 382
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 460 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 487
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 486 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 513
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 460 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 487
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 486 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 513
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 327 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 354
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 500 SRTCSPLRRIASRNLLSMIPTSTPC 426
SR+ S L+ +ASR LS +P PC
Sbjct: 245 SRSASTLKELASRLHLSKVPEKLPC 269
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 460 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 487
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 544 CPCCSRQKCPSKPQHHARAHHCGESPPEI 458
C CC R K S+ H A HC +P I
Sbjct: 486 CACCCRAKKKSQKTRHQNA-HCSSAPSVI 513
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 664 GDGEESDNEGAFEHHKEQSSRTNHANNNED 753
GDGEE NE + E ++TN N + +
Sbjct: 3836 GDGEEDQNEDQNDQELEDPTQTNEENEDSE 3865
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,126,707
Number of Sequences: 27780
Number of extensions: 402485
Number of successful extensions: 1439
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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