Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13j09
(350 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK024384-1|BAB14903.1| 924|Homo sapiens protein ( Homo sapiens ... 31 0.77
BC024298-1|AAH24298.1| 1359|Homo sapiens RAD54-like 2 (S. cerevi... 31 1.4
BC001474-1|AAH01474.2| 1159|Homo sapiens RAD54L2 protein protein. 31 1.4
AB018352-1|BAA34529.2| 1385|Homo sapiens KIAA0809 protein protein. 31 1.4
BC020956-1|AAH20956.1| 924|Homo sapiens SETD5 protein protein. 29 3.1
AK025478-1|BAB15144.1| 603|Homo sapiens protein ( Homo sapiens ... 29 3.1
AK001569-1|BAA91762.1| 924|Homo sapiens protein ( Homo sapiens ... 29 3.1
AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein. 29 3.1
>AK024384-1|BAB14903.1| 924|Homo sapiens protein ( Homo sapiens
cDNA FLJ14322 fis, clone PLACE4000063, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 924
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 65 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 238
++ S R S+ P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 597 VQGSSARTSSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 655
Query: 239 R 241
R
Sbjct: 656 R 656
>BC024298-1|AAH24298.1| 1359|Homo sapiens RAD54-like 2 (S. cerevisiae)
protein.
Length = 1359
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 29 QICCDH*QYPCL-LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQS 205
Q C D ++P L LR R+ +T P + S +SR K H+P +PY H PV
Sbjct: 1132 QPCGD--RHPVLDLRGHKRKLATPPAAQESSRRRSR-KGHLPAPVQPY---EHGYPVSGG 1185
Query: 206 QALWSISLS 232
A+ +SL+
Sbjct: 1186 FAMPPVSLN 1194
>BC001474-1|AAH01474.2| 1159|Homo sapiens RAD54L2 protein protein.
Length = 1159
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 29 QICCDH*QYPCL-LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQS 205
Q C D ++P L LR R+ +T P + S +SR K H+P +PY H PV
Sbjct: 932 QPCGD--RHPVLDLRGHKRKLATPPAAQESSRRRSR-KGHLPAPVQPY---EHGYPVSGG 985
Query: 206 QALWSISLS 232
A+ +SL+
Sbjct: 986 FAMPPVSLN 994
>AB018352-1|BAA34529.2| 1385|Homo sapiens KIAA0809 protein protein.
Length = 1385
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 29 QICCDH*QYPCL-LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQS 205
Q C D ++P L LR R+ +T P + S +SR K H+P +PY H PV
Sbjct: 1158 QPCGD--RHPVLDLRGHKRKLATPPAAQESSRRRSR-KGHLPAPVQPY---EHGYPVSGG 1211
Query: 206 QALWSISLS 232
A+ +SL+
Sbjct: 1212 FAMPPVSLN 1220
>BC020956-1|AAH20956.1| 924|Homo sapiens SETD5 protein protein.
Length = 924
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 65 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 238
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 597 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 655
Query: 239 R 241
R
Sbjct: 656 R 656
>AK025478-1|BAB15144.1| 603|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21825 fis, clone HEP01348. ).
Length = 603
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 65 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 238
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 276 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 334
Query: 239 R 241
R
Sbjct: 335 R 335
>AK001569-1|BAA91762.1| 924|Homo sapiens protein ( Homo sapiens
cDNA FLJ10707 fis, clone NT2RP3000859. ).
Length = 924
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 65 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 238
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 597 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 655
Query: 239 R 241
R
Sbjct: 656 R 656
>AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein.
Length = 1409
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 65 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 238
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 1082 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 1140
Query: 239 R 241
R
Sbjct: 1141 R 1141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,740,445
Number of Sequences: 237096
Number of extensions: 965180
Number of successful extensions: 6832
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6832
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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