Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13j07
         (781 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065503-1|AAH65503.1|  551|Homo sapiens ZNF480 protein protein.       31   3.5  
BC018783-1|AAH18783.1|  516|Homo sapiens zinc finger protein 480...    31   3.5  
AY512662-1|AAR97581.1|  516|Homo sapiens zinc finger protein 480...    31   3.5  
AK096559-1|BAC04817.1|  516|Homo sapiens protein ( Homo sapiens ...    31   3.5  

>BC065503-1|AAH65503.1|  551|Homo sapiens ZNF480 protein protein.
          Length = 551

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 238 KILNWNNQIKLWTKHRLNISCLQHIHNYLNVKYFDNNNLHNSDIV 372
           +++N  NQ++ +  H  ++SCLQ + + +    F+ N+  +S  +
Sbjct: 162 RVINGCNQVENFINHSSSVSCLQEMSSSVKTPIFNRNDFDDSSFL 206


>BC018783-1|AAH18783.1|  516|Homo sapiens zinc finger protein 480
           protein.
          Length = 516

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 238 KILNWNNQIKLWTKHRLNISCLQHIHNYLNVKYFDNNNLHNSDIV 372
           +++N  NQ++ +  H  ++SCLQ + + +    F+ N+  +S  +
Sbjct: 127 RVINGCNQVENFINHSSSVSCLQEMSSSVKTPIFNRNDFDDSSFL 171


>AY512662-1|AAR97581.1|  516|Homo sapiens zinc finger protein 480
           protein.
          Length = 516

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 238 KILNWNNQIKLWTKHRLNISCLQHIHNYLNVKYFDNNNLHNSDIV 372
           +++N  NQ++ +  H  ++SCLQ + + +    F+ N+  +S  +
Sbjct: 127 RVINGCNQVENFINHSSSVSCLQEMSSSVKTPIFNRNDFDDSSFL 171


>AK096559-1|BAC04817.1|  516|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39240 fis, clone OCBBF2008041, moderately
           similar to ZINC FINGER PROTEIN 43. ).
          Length = 516

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 238 KILNWNNQIKLWTKHRLNISCLQHIHNYLNVKYFDNNNLHNSDIV 372
           +++N  NQ++ +  H  ++SCLQ + + +    F+ N+  +S  +
Sbjct: 127 RVINGCNQVENFINHSSSVSCLQEMSSSVKTPIFNRNDFDDSSFL 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,617,825
Number of Sequences: 237096
Number of extensions: 1901750
Number of successful extensions: 4829
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4828
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)