Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13i15
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 67 2e-13
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 58 1e-10
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 54 1e-09
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 54 1e-09
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 45 6e-07
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 33 0.003
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 26 0.41
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 25 0.94
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 1.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.0
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 22 6.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.8
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 66.9 bits (156), Expect = 2e-13
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Frame = -1
Query: 551 QLVRGLHYIHSRGIIHHDIKPSNVFVAPHEGGLLVQLGDFGLACPLQ---QSHSGLALGT 381
Q++ +H+ H G++H D+KP N+ +A G V+L DFGLA +Q Q+ G A GT
Sbjct: 17 QILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFA-GT 75
Query: 380 HMYAAPEQLDGQCNPKS-DMYSLGIILLELV--EPFVTDMERVKTITDLRKGQI----PA 222
Y +PE L + K D+++ G+IL L+ P D ++ + ++ G P
Sbjct: 76 PGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSPE 135
Query: 221 HLTANYPKIAHIIGKLVQRKPSKRLDTAQLLE 126
T P+ ++I +++ PSKR+ ++ L+
Sbjct: 136 WDTVT-PEAKNLINQMLTVNPSKRITASEALK 166
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 57.6 bits (133), Expect = 1e-10
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Frame = -1
Query: 548 LVRGLHYIHSRGIIHHDIKPSNVFVAPHEGGLLVQLGDFGLACPLQQSHSGLAL-GTHMY 372
+V Y+HSR II+ D+KP N+ + +G V+L DFG A L GT Y
Sbjct: 475 VVEAFDYLHSRNIIYRDLKPENLLL-DSQG--YVKLVDFGFAKRLDHGRKTWTFCGTPEY 531
Query: 371 AAPEQ-LDGQCNPKSDMYSLGIILLELV--EPFVTDMERVKTITDLRKG----QIPAHLT 213
APE L+ + +D +SLG+++ EL+ P T + +KT + KG + P +T
Sbjct: 532 VAPEVILNKGHDISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKGIDAIEFPRSIT 591
Query: 212 ANYPKIAHIIGKLVQRKPSKRL 147
N +I KL + P++RL
Sbjct: 592 RN---ATALIKKLCRDNPAERL 610
Score = 24.6 bits (51), Expect = 0.94
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 92 TIRSLREELAAKDDEIAKLKMML 24
T+R L+E L KD++I +L+ +L
Sbjct: 3 TLRELQELLRVKDEKIVELEALL 25
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = -1
Query: 566 IDMFTQLVRGLHYIHSRGIIHHDIKPSNVFVAPHEGGLLVQLGDFGLACPLQQSHSGLAL 387
I + ++ G+ Y+HS+G++H D+K NV + +L DFG C + G +
Sbjct: 700 IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIEN---RAKLTDFGF-CITEVMMLGSIV 755
Query: 386 GTHMYAAPEQLDGQCNPKSDMYSLGII 306
GT ++ APE L G + D+Y+ GI+
Sbjct: 756 GTPVHMAPELLSGHYDSSVDVYAFGIL 782
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = -1
Query: 566 IDMFTQLVRGLHYIHSRGIIHHDIKPSNVFVAPHEGGLLVQLGDFGLACPLQQSHSGLAL 387
I + ++ G+ Y+HS+G++H D+K NV + +L DFG C + G +
Sbjct: 738 IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIEN---RAKLTDFGF-CITEVMMLGSIV 793
Query: 386 GTHMYAAPEQLDGQCNPKSDMYSLGII 306
GT ++ APE L G + D+Y+ GI+
Sbjct: 794 GTPVHMAPELLSGHYDSSVDVYAFGIL 820
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 45.2 bits (102), Expect = 6e-07
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = -1
Query: 536 LHYIHSRGIIHHDIKPSNVFVAPHEGGLLVQLGDFGLACPL-QQSHSGLALGTHMYAAPE 360
L + H+ GI+H D+KP N+ ++ + +L DFG + + + GT Y APE
Sbjct: 168 LQFCHNAGIVHADVKPKNILMSKNG---QPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPE 224
Query: 359 QL-DGQCNPKSDMYSLGIILLELV 291
+ + P +D+YSLGI+ +++
Sbjct: 225 VIKQNRPTPAADIYSLGIVAWQML 248
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 33.1 bits (72), Expect = 0.003
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = -1
Query: 554 TQLVRGLHYIHSRGIIHHDIKPSNVFVAPHEGGLLVQLGDFGL 426
+++ GL ++H RGI++ D+K NV + +G +++ DFG+
Sbjct: 92 SEIAIGLFFLHGRGIVYRDLKLDNVLL-DQDGH--IKIADFGM 131
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 25.8 bits (54), Expect = 0.41
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 418 GQAKPKSPNCTNKP-PSCGATNTL 486
G+A P+SPN + P C +T T+
Sbjct: 734 GEASPRSPNASPSPAEQCASTTTI 757
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 272 YQSRMVLPTQVILYPDCTCRSLDCTAHPVAPVQH 373
+ ++ +L V + P CTC+++ C V + H
Sbjct: 299 FGNKALLTPGVTMIPACTCKAVACLDPYVYAISH 332
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 429 TEITQLHQQATFMWRDEYIT 488
T + +LH T MW D +++
Sbjct: 86 TSVMELHSWMTLMWTDSHLS 105
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 297 VGRTIRD*YGTSENYHRPPQRSDSSSPHCQLP 202
VG +D G+S ++H+ P ++ SS+ Q+P
Sbjct: 619 VGEISQD--GSSPHFHQSPSQNHSSAVPDQMP 648
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.0
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +1
Query: 349 PSSCSGAAYICVPSANPLWDCCNGQAKPKSPNCTNKPPSCGATNT 483
PS Y AN QAKP+S P+ G T
Sbjct: 989 PSPFKRGRYTPPQPANAQQGQAQAQAKPQSQEANKPKPATGGKGT 1033
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +1
Query: 628 SHTCNGRVKSSEPFRDTDIWLLRSSSHC 711
S+ C GR S + IW + S C
Sbjct: 50 SYACRGRCSSYLQVSGSKIWQMERSCMC 77
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 413 VTGKPNRNHPTAPTSHLHVARR 478
+T NRNH + T+H RR
Sbjct: 254 LTATVNRNHLSGGTNHWDSGRR 275
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,909
Number of Sequences: 438
Number of extensions: 5221
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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